RNA–Protein interactions for RNA: ENST00000639715.1

SCARB2-218, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,355 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-218ENST00000639715 ADAMTSL3P82987 1691 aa7.33□□□□□ -1.24
SCARB2-218ENST00000639715 MAP3K4Q9Y6R4 1608 aa7.32□□□□□ -1.24
SCARB2-218ENST00000639715 RALBP1Q15311 655 aa7.32□□□□□ -1.24
SCARB2-218ENST00000639715 NAP1L2Q9ULW6 460 aaPredicted RBP7.32□□□□□ -1.24
SCARB2-218ENST00000639715 KNSTRNQ9Y448 316 aa7.32□□□□□ -1.24
SCARB2-218ENST00000639715 NUP155O75694 1391 aa7.32□□□□□ -1.24
SCARB2-218ENST00000639715 POLA1P09884 1462 aaPredicted RBP7.32□□□□□ -1.24
SCARB2-218ENST00000639715 ABCA10Q8WWZ4 1543 aa7.32□□□□□ -1.24
SCARB2-218ENST00000639715 HFM1A2PYH4 1435 aa7.32□□□□□ -1.24
SCARB2-218ENST00000639715 WASHC2CQ9Y4E1 1318 aa7.32□□□□□ -1.24
SCARB2-218ENST00000639715 SLC4A3P48751 1232 aa7.31□□□□□ -1.24
SCARB2-218ENST00000639715 ABCA5Q8WWZ7 1642 aa7.31□□□□□ -1.24
SCARB2-218ENST00000639715 TMF1P82094 1093 aa7.31□□□□□ -1.24
SCARB2-218ENST00000639715 CHMP4BQ9H444 224 aaKnown RBP7.31□□□□□ -1.24
SCARB2-218ENST00000639715 PRKRIP1Q9H875 184 aaPredicted RBP7.31□□□□□ -1.24
SCARB2-218ENST00000639715 NUP160Q12769 1436 aa7.31□□□□□ -1.24
SCARB2-218ENST00000639715 CHGAP10645 457 aaKnown RBP7.31□□□□□ -1.24
SCARB2-218ENST00000639715 EHBP1L1Q8N3D4 1523 aa7.3□□□□□ -1.24
SCARB2-218ENST00000639715 MIA2Q96PC5 1412 aa7.3□□□□□ -1.24
SCARB2-218ENST00000639715 CEP170Q5SW79 1584 aa7.29□□□□□ -1.24
SCARB2-218ENST00000639715 JPH4Q96JJ6 628 aa7.29□□□□□ -1.24
SCARB2-218ENST00000639715 FAM13BQ9NYF5 915 aa7.29□□□□□ -1.24
SCARB2-218ENST00000639715 TRHP20396 242 aaPredicted RBP7.29□□□□□ -1.24
SCARB2-218ENST00000639715 KLHL34Q8N239 644 aa7.29□□□□□ -1.24
SCARB2-218ENST00000639715 UPF2Q9HAU5 1272 aaKnown RBP7.29□□□□□ -1.24
SCARB2-218ENST00000639715 PDCL3Q9H2J4 239 aa7.29□□□□□ -1.24
SCARB2-218ENST00000639715 KTN1Q86UP2 1357 aaKnown RBP7.29□□□□□ -1.24
SCARB2-218ENST00000639715 TCERG1O14776 1098 aaKnown RBP7.29□□□□□ -1.24
SCARB2-218ENST00000639715 ZBED9Q6R2W3 1325 aa7.29□□□□□ -1.24
SCARB2-218ENST00000639715 CUL7Q14999 1698 aa7.29□□□□□ -1.24
SCARB2-218ENST00000639715 NUDCQ9Y266 331 aa7.28□□□□□ -1.24
SCARB2-218ENST00000639715 GOLGA6L3A6NEY3 463 aa7.28□□□□□ -1.24
SCARB2-218ENST00000639715 PDE4AP27815 886 aa7.28□□□□□ -1.24
SCARB2-218ENST00000639715 DNTTIP2Q5QJE6 756 aaKnown RBP7.28□□□□□ -1.24
SCARB2-218ENST00000639715 GZF1Q9H116 711 aaPredicted RBP7.27□□□□□ -1.24
SCARB2-218ENST00000639715 GRIN2BQ13224 1484 aa7.27□□□□□ -1.25
SCARB2-218ENST00000639715 PDE3BQ13370 1112 aa7.27□□□□□ -1.25
SCARB2-218ENST00000639715 ZHX1Q9UKY1 873 aaPredicted RBP7.27□□□□□ -1.25
SCARB2-218ENST00000639715 CCDC7Q96M83 1385 aa7.27□□□□□ -1.25
SCARB2-218ENST00000639715 CYB5RLQ6IPT4 315 aa7.27□□□□□ -1.25
SCARB2-218ENST00000639715 MYH16Q9H6N6 1097 aa7.27□□□□□ -1.25
SCARB2-218ENST00000639715 PCF11O94913 1555 aaKnown RBP7.26□□□□□ -1.25
SCARB2-218ENST00000639715 SNAPC4Q5SXM2 1469 aa7.26□□□□□ -1.25
SCARB2-218ENST00000639715 TPM2P07951 284 aa7.26□□□□□ -1.25
SCARB2-218ENST00000639715 PLCD3Q8N3E9 789 aa7.26□□□□□ -1.25
SCARB2-218ENST00000639715 CNTLNQ9NXG0 1405 aa7.26□□□□□ -1.25
SCARB2-218ENST00000639715 KIF15Q9NS87 1388 aa7.26□□□□□ -1.25
SCARB2-218ENST00000639715 NLRP13Q86W25 1043 aa7.26□□□□□ -1.25
SCARB2-218ENST00000639715 SUPT6HQ7KZ85 1726 aaKnown RBP7.26□□□□□ -1.25
SCARB2-218ENST00000639715 FRAT2O75474 233 aaPredicted RBP7.26□□□□□ -1.25
SCARB2-218ENST00000639715 EFCAB2Q5VUJ9 269 aa7.25□□□□□ -1.25
SCARB2-218ENST00000639715 KANK1Q14678 1352 aa7.25□□□□□ -1.25
SCARB2-218ENST00000639715 NAIPQ13075 1403 aa7.25□□□□□ -1.25
SCARB2-218ENST00000639715 CALD1Q05682 793 aaKnown RBP7.25□□□□□ -1.25
SCARB2-218ENST00000639715 USP47Q96K76 1375 aa7.25□□□□□ -1.25
SCARB2-218ENST00000639715 CFAP53Q96M91 514 aa7.25□□□□□ -1.25
SCARB2-218ENST00000639715 BECN1Q14457 450 aa7.24□□□□□ -1.25
SCARB2-218ENST00000639715 CC2D1BQ5T0F9 858 aaKnown RBP7.24□□□□□ -1.25
SCARB2-218ENST00000639715 HECW1Q76N89 1606 aa7.24□□□□□ -1.25
SCARB2-218ENST00000639715 SENP3-EIF4A1A0A087X0R7 540 aa7.24□□□□□ -1.25
SCARB2-218ENST00000639715 MSNP26038 577 aaKnown RBP7.24□□□□□ -1.25
SCARB2-218ENST00000639715 RCAN3Q9UKA8 241 aa7.24□□□□□ -1.25
SCARB2-218ENST00000639715 MAP7D2Q96T17 732 aa7.24□□□□□ -1.25
SCARB2-218ENST00000639715 HNRNPMP52272 730 aaKnown RBP eCLIP7.24□□□□□ -1.25
SCARB2-218ENST00000639715 MYBBP1AQ9BQG0 1328 aaKnown RBP7.24□□□□□ -1.25
SCARB2-218ENST00000639715 RRAGDQ9NQL2 400 aaPredicted RBP7.23□□□□□ -1.25
SCARB2-218ENST00000639715 KIF7Q2M1P5 1343 aa7.23□□□□□ -1.25
SCARB2-218ENST00000639715 STAG3Q9UJ98 1225 aa7.23□□□□□ -1.25
SCARB2-218ENST00000639715 ADAMTS12P58397 1594 aa7.23□□□□□ -1.25
SCARB2-218ENST00000639715 MAPK8IP2Q13387 824 aaPredicted RBP7.22□□□□□ -1.25
SCARB2-218ENST00000639715 ROCK1Q13464 1354 aa7.22□□□□□ -1.25
SCARB2-218ENST00000639715 ST20-MTHFSA0A0A6YYL1 179 aa7.22□□□□□ -1.25
SCARB2-218ENST00000639715 CCDC144AA2RUR9 1427 aa7.22□□□□□ -1.25
SCARB2-218ENST00000639715 PRDM10Q9NQV6 1147 aa7.22□□□□□ -1.25
SCARB2-218ENST00000639715 ADCY10Q96PN6 1610 aa7.22□□□□□ -1.25
SCARB2-218ENST00000639715 ZNF644Q9H582 1327 aaPredicted RBP7.22□□□□□ -1.25
SCARB2-218ENST00000639715 PTPRGP23470 1445 aa7.22□□□□□ -1.25
SCARB2-218ENST00000639715 ANKRD50Q9ULJ7 1429 aa7.22□□□□□ -1.25
SCARB2-218ENST00000639715 SLKQ9H2G2 1235 aaPredicted RBP7.21□□□□□ -1.25
SCARB2-218ENST00000639715 EPRSP07814 1512 aaKnown RBP7.2□□□□□ -1.26
SCARB2-218ENST00000639715 UHRF1BP1LA0JNW5 1464 aa7.2□□□□□ -1.26
SCARB2-218ENST00000639715 APPP05067 770 aa7.2□□□□□ -1.26
SCARB2-218ENST00000639715 TROQ12816 1431 aaPredicted RBP7.2□□□□□ -1.26
SCARB2-218ENST00000639715 CLCN1P35523 988 aa7.2□□□□□ -1.26
SCARB2-218ENST00000639715 DHX37Q8IY37 1157 aaKnown RBP7.2□□□□□ -1.26
SCARB2-218ENST00000639715 STAC3Q96MF2 364 aa7.2□□□□□ -1.26
SCARB2-218ENST00000639715 HAP1P54257 671 aaPredicted RBP7.2□□□□□ -1.26
SCARB2-218ENST00000639715 KIAA1211Q6ZU35 1233 aa7.2□□□□□ -1.26
SCARB2-218ENST00000639715 ESF1Q9H501 851 aaKnown RBP7.2□□□□□ -1.26
SCARB2-218ENST00000639715 AKNAQ7Z591 1439 aa7.19□□□□□ -1.26
SCARB2-218ENST00000639715 EIF3AQ14152 1382 aaKnown RBP7.19□□□□□ -1.26
SCARB2-218ENST00000639715 MS4A1P11836 297 aa7.19□□□□□ -1.26
SCARB2-218ENST00000639715 TEX14Q8IWB6 1497 aa7.19□□□□□ -1.26
SCARB2-218ENST00000639715 PTPN23Q9H3S7 1636 aa7.19□□□□□ -1.26
SCARB2-218ENST00000639715 DAPK1P53355 1430 aa7.19□□□□□ -1.26
SCARB2-218ENST00000639715 IQGAP2Q13576 1575 aa7.19□□□□□ -1.26
SCARB2-218ENST00000639715 ESPNB1AK53 854 aa7.19□□□□□ -1.26
SCARB2-218ENST00000639715 KIAA1107Q9UPP5 1409 aa7.19□□□□□ -1.26
SCARB2-218ENST00000639715 CFAP43Q8NDM7 1665 aa7.18□□□□□ -1.26
SCARB2-218ENST00000639715 VGLL3A8MV65 326 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms