RNA–Protein interactions for RNA: ENST00000639695.1

RFC1-217, Transcript of replication factor C subunit 1, humanhuman

TSL 5 BASIC

Gene RFC1, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-217ENST00000639695 DPYSL4O14531 572 aa14.16□□□□□ -0.14
RFC1-217ENST00000639695 TYW1BQ6NUM6 668 aa14.15□□□□□ -0.14
RFC1-217ENST00000639695 PHF14O94880 888 aa14.14□□□□□ -0.15
RFC1-217ENST00000639695 NBPF3Q9H094 633 aa14.13□□□□□ -0.15
RFC1-217ENST00000639695 FBXW7Q969H0 707 aa14.11□□□□□ -0.15
RFC1-217ENST00000639695 RABGEF1Q9UJ41 708 aa14.11□□□□□ -0.15
RFC1-217ENST00000639695 BCAMP50895 628 aa14.06□□□□□ -0.16
RFC1-217ENST00000639695 C6orf132Q5T0Z8 1188 aa14.06□□□□□ -0.16
RFC1-217ENST00000639695 IFFO2Q5TF58 517 aa14.06□□□□□ -0.16
RFC1-217ENST00000639695 KIAA1468Q9P260 1216 aa14.06□□□□□ -0.16
RFC1-217ENST00000639695 DDX12PQ92771 950 aa14.05□□□□□ -0.16
RFC1-217ENST00000639695 RBM33Q96EV2 1170 aaKnown RBP14.05□□□□□ -0.16
RFC1-217ENST00000639695 BBXQ8WY36 941 aaPredicted RBP14.04□□□□□ -0.16
RFC1-217ENST00000639695 EPAS1Q99814 870 aa14.03□□□□□ -0.16
RFC1-217ENST00000639695 ANKK1Q8NFD2 765 aa14.02□□□□□ -0.17
RFC1-217ENST00000639695 SEPT9Q9UHD8 586 aaPredicted RBP14.02□□□□□ -0.17
RFC1-217ENST00000639695 A0A0G2JS52 829 aa14.01□□□□□ -0.17
RFC1-217ENST00000639695 BCANQ96GW7 911 aa14.01□□□□□ -0.17
RFC1-217ENST00000639695 VSIG10Q8N0Z9 540 aa14□□□□□ -0.17
RFC1-217ENST00000639695 ZFRQ96KR1 1074 aaKnown RBP13.99□□□□□ -0.17
RFC1-217ENST00000639695 SOWAHBA6NEL2 793 aa13.98□□□□□ -0.17
RFC1-217ENST00000639695 TRIM6-TRIM34B2RNG4 842 aa13.97□□□□□ -0.17
RFC1-217ENST00000639695 LAPTM4BQ86VI4 370 aa13.97□□□□□ -0.17
RFC1-217ENST00000639695 TSR1Q2NL82 804 aaKnown RBP13.96□□□□□ -0.17
RFC1-217ENST00000639695 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.96□□□□□ -0.17
RFC1-217ENST00000639695 ONECUT3O60422 494 aaPredicted RBP13.94□□□□□ -0.18
RFC1-217ENST00000639695 PDIA6Q15084 440 aa13.94□□□□□ -0.18
RFC1-217ENST00000639695 WBP1LQ9NX94 342 aa13.94□□□□□ -0.18
RFC1-217ENST00000639695 PRIM1P49642 420 aaKnown RBP13.93□□□□□ -0.18
RFC1-217ENST00000639695 NBR1Q14596 966 aa13.93□□□□□ -0.18
RFC1-217ENST00000639695 ITGBL1O95965 494 aaPredicted RBP13.92□□□□□ -0.18
RFC1-217ENST00000639695 EN1Q05925 392 aaPredicted RBP13.92□□□□□ -0.18
RFC1-217ENST00000639695 TSKSQ9UJT2 592 aa13.92□□□□□ -0.18
RFC1-217ENST00000639695 RGS20O76081 388 aa13.9□□□□□ -0.18
RFC1-217ENST00000639695 FAM98CQ17RN3 349 aaKnown RBP13.89□□□□□ -0.19
RFC1-217ENST00000639695 SPRYD3Q8NCJ5 442 aa13.89□□□□□ -0.19
RFC1-217ENST00000639695 MAP3K7O43318 606 aa13.88□□□□□ -0.19
RFC1-217ENST00000639695 FAM198AQ9UFP1 575 aa13.86□□□□□ -0.19
RFC1-217ENST00000639695 C3orf80F5H4A9 247 aa13.85□□□□□ -0.19
RFC1-217ENST00000639695 SPDYE16A6NNV3 312 aaPredicted RBP13.83□□□□□ -0.2
RFC1-217ENST00000639695 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.83□□□□□ -0.2
RFC1-217ENST00000639695 HPS5Q9UPZ3 1129 aa13.83□□□□□ -0.2
RFC1-217ENST00000639695 SMAPO00193 183 aa13.82□□□□□ -0.2
RFC1-217ENST00000639695 E2F4Q16254 413 aa13.82□□□□□ -0.2
RFC1-217ENST00000639695 LRCH3Q96II8 777 aa13.81□□□□□ -0.2
RFC1-217ENST00000639695 IRX2Q9BZI1 471 aaPredicted RBP13.81□□□□□ -0.2
RFC1-217ENST00000639695 NYAP1Q6ZVC0 841 aa13.8□□□□□ -0.2
RFC1-217ENST00000639695 PAXIP1Q6ZW49 1069 aaPredicted RBP13.8□□□□□ -0.2
RFC1-217ENST00000639695 TSR3Q9UJK0 312 aaKnown RBP13.8□□□□□ -0.2
RFC1-217ENST00000639695 GRXCR2A6NFK2 248 aa13.79□□□□□ -0.2
RFC1-217ENST00000639695 CDCA7LQ96GN5 454 aa13.79□□□□□ -0.2
RFC1-217ENST00000639695 CFAP44Q96MT7 982 aa13.79□□□□□ -0.2
RFC1-217ENST00000639695 PACS2Q86VP3 889 aa13.78□□□□□ -0.2
RFC1-217ENST00000639695 CDHR5Q9HBB8 845 aa13.78□□□□□ -0.2
RFC1-217ENST00000639695 ARIH1Q9Y4X5 557 aaPredicted RBP13.77□□□□□ -0.21
RFC1-217ENST00000639695 PRSS12P56730 875 aa13.76□□□□□ -0.21
RFC1-217ENST00000639695 KCNC4Q03721 635 aa13.76□□□□□ -0.21
RFC1-217ENST00000639695 OSBPP22059 807 aa13.74□□□□□ -0.21
RFC1-217ENST00000639695 SAMD7Q7Z3H4 446 aa13.74□□□□□ -0.21
RFC1-217ENST00000639695 TATDN2Q93075 761 aa13.69□□□□□ -0.22
RFC1-217ENST00000639695 WDR70Q9NW82 654 aa13.69□□□□□ -0.22
RFC1-217ENST00000639695 PRKCSHP14314 528 aaPredicted RBP13.68□□□□□ -0.22
RFC1-217ENST00000639695 PPP4CP60510 307 aa13.68□□□□□ -0.22
RFC1-217ENST00000639695 PNMA3Q9UL41 463 aa13.68□□□□□ -0.22
RFC1-217ENST00000639695 TJAP1Q5JTD0 557 aa13.67□□□□□ -0.22
RFC1-217ENST00000639695 KDM2AQ9Y2K7 1162 aa13.67□□□□□ -0.22
RFC1-217ENST00000639695 CERKQ8TCT0 537 aa13.66□□□□□ -0.22
RFC1-217ENST00000639695 NBPF26B4DH59 902 aa13.64□□□□□ -0.23
RFC1-217ENST00000639695 NUDT18Q6ZVK8 323 aa13.64□□□□□ -0.23
RFC1-217ENST00000639695 NPDC1Q9NQX5 325 aaPredicted RBP13.63□□□□□ -0.23
RFC1-217ENST00000639695 TTC13Q8NBP0 860 aa13.6□□□□□ -0.23
RFC1-217ENST00000639695 MTRQ99707 1265 aa13.6□□□□□ -0.23
RFC1-217ENST00000639695 PADI6Q6TGC4 694 aa13.59□□□□□ -0.23
RFC1-217ENST00000639695 APLP1P51693 650 aa13.58□□□□□ -0.24
RFC1-217ENST00000639695 ZNF516Q92618 1163 aa13.58□□□□□ -0.24
RFC1-217ENST00000639695 RBM27Q9P2N5 1060 aaKnown RBP13.57□□□□□ -0.24
RFC1-217ENST00000639695 RNF40O75150 1001 aa13.56□□□□□ -0.24
RFC1-217ENST00000639695 TPRNQ4KMQ1 711 aa13.55□□□□□ -0.24
RFC1-217ENST00000639695 MLLT3P42568 568 aaPredicted RBP13.54□□□□□ -0.24
RFC1-217ENST00000639695 Q6ZNB5 142 aa13.54□□□□□ -0.24
RFC1-217ENST00000639695 LCE2BO14633 110 aa13.53□□□□□ -0.24
RFC1-217ENST00000639695 SWT1Q5T5J6 900 aaKnown RBP13.53□□□□□ -0.24
RFC1-217ENST00000639695 IL21Q9HBE4 155 aa13.53□□□□□ -0.24
RFC1-217ENST00000639695 TSHZ2Q9NRE2 1034 aa13.53□□□□□ -0.24
RFC1-217ENST00000639695 PPP1R18Q6NYC8 613 aa13.51□□□□□ -0.25
RFC1-217ENST00000639695 NKX2-3Q8TAU0 364 aa13.5□□□□□ -0.25
RFC1-217ENST00000639695 EYA1Q99502 592 aa13.48□□□□□ -0.25
RFC1-217ENST00000639695 PRKD2Q9BZL6 878 aa13.48□□□□□ -0.25
RFC1-217ENST00000639695 KCNV2Q8TDN2 545 aa13.47□□□□□ -0.25
RFC1-217ENST00000639695 HDGFP51858 240 aaKnown RBP13.44□□□□□ -0.26
RFC1-217ENST00000639695 COPS2P61201 443 aa13.44□□□□□ -0.26
RFC1-217ENST00000639695 GFRA3O60609 400 aa13.43□□□□□ -0.26
RFC1-217ENST00000639695 ARHGEF1Q92888 912 aaKnown RBP13.42□□□□□ -0.26
RFC1-217ENST00000639695 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.42□□□□□ -0.26
RFC1-217ENST00000639695 SLF2Q8IX21 1173 aa13.41□□□□□ -0.26
RFC1-217ENST00000639695 PTGDRQ13258 359 aa13.39□□□□□ -0.27
RFC1-217ENST00000639695 FAM161AQ3B820 660 aa13.37□□□□□ -0.27
RFC1-217ENST00000639695 LAPTM4AQ15012 233 aa13.36□□□□□ -0.27
RFC1-217ENST00000639695 V9GY48 417 aaPredicted RBP13.36□□□□□ -0.27
RFC1-217ENST00000639695 ZPR1O75312 459 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms