RNA–Protein interactions for RNA: ENST00000639548.1

PAX6-258, Transcript of paired box 6, humanhuman

TSL 5 BASIC

Gene PAX6, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-258ENST00000639548 EIF2AK4Q9P2K8 1649 aaKnown RBP17.3■□□□□ 0.36
PAX6-258ENST00000639548 PKD2Q13563 968 aa17.3■□□□□ 0.36
PAX6-258ENST00000639548 ATP7AQ04656 1500 aa17.3■□□□□ 0.36
PAX6-258ENST00000639548 FOXD1Q16676 465 aa17.29■□□□□ 0.36
PAX6-258ENST00000639548 L3MBTL2Q969R5 705 aa17.29■□□□□ 0.36
PAX6-258ENST00000639548 ATP10AO60312 1499 aa17.29■□□□□ 0.36
PAX6-258ENST00000639548 ADAMTSL3P82987 1691 aa17.29■□□□□ 0.36
PAX6-258ENST00000639548 ARHGEF40Q8TER5 1519 aa17.27■□□□□ 0.36
PAX6-258ENST00000639548 MIER1Q8N108 512 aa17.27■□□□□ 0.35
PAX6-258ENST00000639548 SPAG9O60271 1321 aaKnown RBP17.25■□□□□ 0.35
PAX6-258ENST00000639548 UHRF1BP1Q6BDS2 1440 aa17.25■□□□□ 0.35
PAX6-258ENST00000639548 ZMYM4Q5VZL5 1548 aa17.25■□□□□ 0.35
PAX6-258ENST00000639548 BCORL1Q5H9F3 1711 aa17.25■□□□□ 0.35
PAX6-258ENST00000639548 PTPRMP28827 1452 aa17.24■□□□□ 0.35
PAX6-258ENST00000639548 ZNF518AQ6AHZ1 1483 aa17.24■□□□□ 0.35
PAX6-258ENST00000639548 KDM5CP41229 1560 aa17.24■□□□□ 0.35
PAX6-258ENST00000639548 POLR1AO95602 1720 aaPredicted RBP17.23■□□□□ 0.35
PAX6-258ENST00000639548 SCAPERQ9BY12 1400 aa17.23■□□□□ 0.35
PAX6-258ENST00000639548 VWDEQ8N2E2 1590 aa17.22■□□□□ 0.35
PAX6-258ENST00000639548 KIDINS220Q9ULH0 1771 aa17.21■□□□□ 0.35
PAX6-258ENST00000639548 ARID4BQ4LE39 1312 aaPredicted RBP17.21■□□□□ 0.35
PAX6-258ENST00000639548 POGZQ7Z3K3 1410 aa17.2■□□□□ 0.34
PAX6-258ENST00000639548 MADDQ8WXG6 1647 aa17.19■□□□□ 0.34
PAX6-258ENST00000639548 PRDM15P57071 1507 aaPredicted RBP17.19■□□□□ 0.34
PAX6-258ENST00000639548 TET3O43151 1660 aa17.19■□□□□ 0.34
PAX6-258ENST00000639548 YEATS2Q9ULM3 1422 aa17.19■□□□□ 0.34
PAX6-258ENST00000639548 EIF4G2P78344 907 aaKnown RBP eCLIP17.18■□□□□ 0.34
PAX6-258ENST00000639548 MLH3Q9UHC1 1453 aa17.18■□□□□ 0.34
PAX6-258ENST00000639548 SPATA31E1Q6ZUB1 1445 aa17.17■□□□□ 0.34
PAX6-258ENST00000639548 DHX29Q7Z478 1369 aaKnown RBP17.17■□□□□ 0.34
PAX6-258ENST00000639548 CCDC144AA2RUR9 1427 aa17.16■□□□□ 0.34
PAX6-258ENST00000639548 PLA2R1Q13018 1463 aa17.16■□□□□ 0.34
PAX6-258ENST00000639548 RALGAPBQ86X10 1494 aa17.16■□□□□ 0.34
PAX6-258ENST00000639548 CENPBP07199 599 aaPredicted RBP17.16■□□□□ 0.34
PAX6-258ENST00000639548 AFAP1Q8N556 730 aa17.16■□□□□ 0.34
PAX6-258ENST00000639548 RNF17Q9BXT8 1623 aaKnown RBP17.16■□□□□ 0.34
PAX6-258ENST00000639548 E9PCH4 1651 aa17.16■□□□□ 0.34
PAX6-258ENST00000639548 NBPF8Q3BBV2 869 aa17.15■□□□□ 0.34
PAX6-258ENST00000639548 SIGLEC1Q9BZZ2 1709 aa17.15■□□□□ 0.34
PAX6-258ENST00000639548 NEURL4Q96JN8 1562 aa17.14■□□□□ 0.34
PAX6-258ENST00000639548 MROH1Q8NDA8 1641 aa17.14■□□□□ 0.33
PAX6-258ENST00000639548 SPHKAPQ2M3C7 1700 aa17.13■□□□□ 0.33
PAX6-258ENST00000639548 HSPA5P11021 654 aaKnown RBP17.13■□□□□ 0.33
PAX6-258ENST00000639548 TRPM2O94759 1503 aa17.12■□□□□ 0.33
PAX6-258ENST00000639548 PTPRTO14522 1441 aa17.12■□□□□ 0.33
PAX6-258ENST00000639548 LMTK2Q8IWU2 1503 aa17.12■□□□□ 0.33
PAX6-258ENST00000639548 LAMC1P11047 1609 aa17.12■□□□□ 0.33
PAX6-258ENST00000639548 RIMS1Q86UR5 1692 aaKnown RBP17.12■□□□□ 0.33
PAX6-258ENST00000639548 KANK1Q14678 1352 aa17.11■□□□□ 0.33
PAX6-258ENST00000639548 CEP152O94986 1710 aa17.1■□□□□ 0.33
PAX6-258ENST00000639548 ILDR1Q86SU0 546 aaPredicted RBP17.1■□□□□ 0.33
PAX6-258ENST00000639548 DDX10Q13206 875 aaKnown RBP17.09■□□□□ 0.33
PAX6-258ENST00000639548 TRPM1Q7Z4N2 1603 aa17.09■□□□□ 0.33
PAX6-258ENST00000639548 A2MP01023 1474 aa17.08■□□□□ 0.33
PAX6-258ENST00000639548 LMTK3Q96Q04 1460 aa17.08■□□□□ 0.32
PAX6-258ENST00000639548 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.06■□□□□ 0.32
PAX6-258ENST00000639548 EFCAB6Q5THR3 1501 aa17.06■□□□□ 0.32
PAX6-258ENST00000639548 STAC3Q96MF2 364 aa17.05■□□□□ 0.32
PAX6-258ENST00000639548 ABCA6Q8N139 1617 aa17.05■□□□□ 0.32
PAX6-258ENST00000639548 PRAG1Q86YV5 1406 aa17.05■□□□□ 0.32
PAX6-258ENST00000639548 MLECQ14165 292 aa17.04■□□□□ 0.32
PAX6-258ENST00000639548 FER1L4A9Z1Z3 1794 aa17.04■□□□□ 0.32
PAX6-258ENST00000639548 WASHC2AQ641Q2 1341 aa17.04■□□□□ 0.32
PAX6-258ENST00000639548 CCER2I3L3R5 266 aa17.04■□□□□ 0.32
PAX6-258ENST00000639548 HIRIP3Q9BW71 556 aaPredicted RBP17.04■□□□□ 0.32
PAX6-258ENST00000639548 CCDC7Q96M83 1385 aa17.03■□□□□ 0.32
PAX6-258ENST00000639548 GPRASP1Q5JY77 1395 aa17.02■□□□□ 0.32
PAX6-258ENST00000639548 CNTLNQ9NXG0 1405 aa17.02■□□□□ 0.32
PAX6-258ENST00000639548 CLTCL1P53675 1640 aa17.02■□□□□ 0.31
PAX6-258ENST00000639548 USP47Q96K76 1375 aa17.02■□□□□ 0.31
PAX6-258ENST00000639548 REREQ9P2R6 1566 aa17.01■□□□□ 0.31
PAX6-258ENST00000639548 DIP2CQ9Y2E4 1556 aa17.01■□□□□ 0.31
PAX6-258ENST00000639548 ZC3H13Q5T200 1668 aaKnown RBP16.99■□□□□ 0.31
PAX6-258ENST00000639548 KIF3BO15066 747 aa16.99■□□□□ 0.31
PAX6-258ENST00000639548 ANP32CO43423 234 aa16.99■□□□□ 0.31
PAX6-258ENST00000639548 DCAF11Q8TEB1 546 aa16.98■□□□□ 0.31
PAX6-258ENST00000639548 PLPPR3Q6T4P5 718 aa16.97■□□□□ 0.31
PAX6-258ENST00000639548 MYT1LQ9UL68 1186 aa16.97■□□□□ 0.31
PAX6-258ENST00000639548 KIF1BO60333 1816 aa16.97■□□□□ 0.31
PAX6-258ENST00000639548 KIAA1210Q9ULL0 1709 aa16.97■□□□□ 0.31
PAX6-258ENST00000639548 AGLP35573 1532 aa16.95■□□□□ 0.3
PAX6-258ENST00000639548 HSPA2P54652 639 aa16.95■□□□□ 0.3
PAX6-258ENST00000639548 ROCK2O75116 1388 aaKnown RBP16.94■□□□□ 0.3
PAX6-258ENST00000639548 IFT172Q9UG01 1749 aa16.94■□□□□ 0.3
PAX6-258ENST00000639548 KIF7Q2M1P5 1343 aa16.94■□□□□ 0.3
PAX6-258ENST00000639548 ABCC3O15438 1527 aa16.93■□□□□ 0.3
PAX6-258ENST00000639548 CARD11Q9BXL7 1154 aa16.93■□□□□ 0.3
PAX6-258ENST00000639548 CAMSAP1Q5T5Y3 1602 aa16.93■□□□□ 0.3
PAX6-258ENST00000639548 C11orf95C9JLR9 678 aaPredicted RBP16.92■□□□□ 0.3
PAX6-258ENST00000639548 SETD1BQ9UPS6 1966 aaKnown RBP16.92■□□□□ 0.3
PAX6-258ENST00000639548 MYOM2P54296 1465 aa16.91■□□□□ 0.3
PAX6-258ENST00000639548 CEBPAP49715 358 aaPredicted RBP16.91■□□□□ 0.3
PAX6-258ENST00000639548 ZNF326Q5BKZ1 582 aaKnown RBP16.91■□□□□ 0.3
PAX6-258ENST00000639548 ARHGAP31Q2M1Z3 1444 aa16.91■□□□□ 0.3
PAX6-258ENST00000639548 PREX1Q8TCU6 1659 aa16.9■□□□□ 0.3
PAX6-258ENST00000639548 YTHDC1Q96MU7 727 aaKnown RBP16.89■□□□□ 0.29
PAX6-258ENST00000639548 KDM2AQ9Y2K7 1162 aa16.89■□□□□ 0.29
PAX6-258ENST00000639548 IQGAP1P46940 1657 aa16.89■□□□□ 0.29
PAX6-258ENST00000639548 ADGRB3O60242 1522 aa16.88■□□□□ 0.29
PAX6-258ENST00000639548 NPATQ14207 1427 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms