RNA–Protein interactions for RNA: ENST00000639394.1

PAX6-256, Transcript of paired box 6, human

TSL 5

Gene PAX6, Length 1,988 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PAX6-256	ENST00000639394	HDAC5	Q9UQL6	1122 aa		14.15	□□□□□ -0.14
PAX6-256	ENST00000639394	GOLGA6L3	A6NEY3	463 aa		14.14	□□□□□ -0.15
PAX6-256	ENST00000639394	JPH4	Q96JJ6	628 aa		14.14	□□□□□ -0.15
PAX6-256	ENST00000639394	KIAA0556	O60303	1618 aa		14.14	□□□□□ -0.15
PAX6-256	ENST00000639394	FOXD1	Q16676	465 aa		14.14	□□□□□ -0.15
PAX6-256	ENST00000639394	GTPBP4	Q9BZE4	634 aa	Known RBP	14.14	□□□□□ -0.15
PAX6-256	ENST00000639394	PRDM10	Q9NQV6	1147 aa		14.14	□□□□□ -0.15
PAX6-256	ENST00000639394	LAS1L	Q9Y4W2	734 aa	Known RBP	14.13	□□□□□ -0.15
PAX6-256	ENST00000639394	FMN1	Q68DA7	1419 aa		14.13	□□□□□ -0.15
PAX6-256	ENST00000639394	CCER2	I3L3R5	266 aa		14.13	□□□□□ -0.15
PAX6-256	ENST00000639394	CLASP1	Q7Z460	1538 aa		14.12	□□□□□ -0.15
PAX6-256	ENST00000639394	LETM1	O95202	739 aa	Predicted RBP	14.12	□□□□□ -0.15
PAX6-256	ENST00000639394	APP	P05067	770 aa		14.11	□□□□□ -0.15
PAX6-256	ENST00000639394	CEP120	Q8N960	986 aa		14.11	□□□□□ -0.15
PAX6-256	ENST00000639394	ZNF592	Q92610	1267 aa		14.11	□□□□□ -0.15
PAX6-256	ENST00000639394	SHROOM2	Q13796	1616 aa		14.11	□□□□□ -0.15
PAX6-256	ENST00000639394	DCAF11	Q8TEB1	546 aa		14.11	□□□□□ -0.15
PAX6-256	ENST00000639394	PCF11	O94913	1555 aa	Known RBP	14.1	□□□□□ -0.15
PAX6-256	ENST00000639394	CASKIN1	Q8WXD9	1431 aa		14.09	□□□□□ -0.15
PAX6-256	ENST00000639394	NPM1	P06748	294 aa	Known RBP eCLIP	14.09	□□□□□ -0.15
PAX6-256	ENST00000639394	CARMIL2	Q6F5E8	1435 aa		14.09	□□□□□ -0.15
PAX6-256	ENST00000639394	PATL2	C9JE40	543 aa	Known RBP	14.09	□□□□□ -0.15
PAX6-256	ENST00000639394	DNTTIP2	Q5QJE6	756 aa	Known RBP	14.08	□□□□□ -0.16
PAX6-256	ENST00000639394	PSMD1	Q99460	953 aa		14.08	□□□□□ -0.16
PAX6-256	ENST00000639394	FYCO1	Q9BQS8	1478 aa		14.08	□□□□□ -0.16
PAX6-256	ENST00000639394	IGSF3	O75054	1194 aa		14.07	□□□□□ -0.16
PAX6-256	ENST00000639394	NFKBIB	Q15653	356 aa		14.07	□□□□□ -0.16
PAX6-256	ENST00000639394	YY1AP1	Q9H869	796 aa		14.07	□□□□□ -0.16
PAX6-256	ENST00000639394	PRG4	Q92954	1404 aa	Predicted RBP	14.06	□□□□□ -0.16
PAX6-256	ENST00000639394	PSEN1	P49768	467 aa		14.06	□□□□□ -0.16
PAX6-256	ENST00000639394	ZHX1	Q9UKY1	873 aa	Predicted RBP	14.05	□□□□□ -0.16
PAX6-256	ENST00000639394	MAP3K1	Q13233	1512 aa		14.05	□□□□□ -0.16
PAX6-256	ENST00000639394	DNAJC2	Q99543	621 aa	Known RBP	14.03	□□□□□ -0.16
PAX6-256	ENST00000639394	VGLL3	A8MV65	326 aa		14.02	□□□□□ -0.16
PAX6-256	ENST00000639394	OSCAR	Q8IYS5	282 aa		14.02	□□□□□ -0.16
PAX6-256	ENST00000639394	TIAM1	Q13009	1591 aa		14.02	□□□□□ -0.17
PAX6-256	ENST00000639394	CC2D1B	Q5T0F9	858 aa	Known RBP	14.01	□□□□□ -0.17
PAX6-256	ENST00000639394	CFAP43	Q8NDM7	1665 aa		14.01	□□□□□ -0.17
PAX6-256	ENST00000639394	ERCC6L2	Q5T890	1561 aa		14	□□□□□ -0.17
PAX6-256	ENST00000639394	GEMIN8	Q9NWZ8	242 aa	Known RBP	14	□□□□□ -0.17
PAX6-256	ENST00000639394	HECW1	Q76N89	1606 aa		13.99	□□□□□ -0.17
PAX6-256	ENST00000639394	KANK4	Q5T7N3	995 aa	Predicted RBP	13.99	□□□□□ -0.17
PAX6-256	ENST00000639394	ATP1B4	Q9UN42	357 aa	Predicted RBP	13.99	□□□□□ -0.17
PAX6-256	ENST00000639394	RALBP1	Q15311	655 aa		13.98	□□□□□ -0.17
PAX6-256	ENST00000639394	LRRIQ1	Q96JM4	1722 aa		13.98	□□□□□ -0.17
PAX6-256	ENST00000639394	NBPF20	Q3BBV1	942 aa		13.98	□□□□□ -0.17
PAX6-256	ENST00000639394	RAPGEF6	Q8TEU7	1601 aa		13.98	□□□□□ -0.17
PAX6-256	ENST00000639394	FAM43B	Q6ZT52	329 aa	Predicted RBP	13.97	□□□□□ -0.17
PAX6-256	ENST00000639394	PTPRG	P23470	1445 aa		13.97	□□□□□ -0.17
PAX6-256	ENST00000639394	PLB1	Q6P1J6	1458 aa		13.96	□□□□□ -0.17
PAX6-256	ENST00000639394	TCERG1	O14776	1098 aa	Known RBP	13.96	□□□□□ -0.18
PAX6-256	ENST00000639394	TMED8	Q6PL24	325 aa	Predicted RBP	13.96	□□□□□ -0.18
PAX6-256	ENST00000639394	CCDC18	Q5T9S5	1454 aa		13.96	□□□□□ -0.18
PAX6-256	ENST00000639394	LRRC9	Q6ZRR7	1453 aa		13.96	□□□□□ -0.18
PAX6-256	ENST00000639394	ABCA8	O94911	1581 aa		13.95	□□□□□ -0.18
PAX6-256	ENST00000639394	NUP153	P49790	1475 aa	Known RBP	13.95	□□□□□ -0.18
PAX6-256	ENST00000639394	EPRS	P07814	1512 aa	Known RBP	13.95	□□□□□ -0.18
PAX6-256	ENST00000639394	SLC52A1	Q9NWF4	448 aa		13.94	□□□□□ -0.18
PAX6-256	ENST00000639394	ZSCAN20	P17040	1043 aa	Predicted RBP	13.93	□□□□□ -0.18
PAX6-256	ENST00000639394	CARD10	Q9BWT7	1032 aa		13.92	□□□□□ -0.18
PAX6-256	ENST00000639394	MYCN	P04198	464 aa	Predicted RBP	13.91	□□□□□ -0.18
PAX6-256	ENST00000639394	TSPYL1	Q9H0U9	437 aa		13.91	□□□□□ -0.18
PAX6-256	ENST00000639394	CDK13	Q14004	1512 aa	Known RBP	13.91	□□□□□ -0.18
PAX6-256	ENST00000639394	CC2D2B	Q6DHV5	1058 aa		13.91	□□□□□ -0.18
PAX6-256	ENST00000639394	ESPN	B1AK53	854 aa		13.89	□□□□□ -0.19
PAX6-256	ENST00000639394	PLCB2	Q00722	1185 aa		13.89	□□□□□ -0.19
PAX6-256	ENST00000639394	KCNH8	Q96L42	1107 aa		13.89	□□□□□ -0.19
PAX6-256	ENST00000639394	UACA	Q9BZF9	1416 aa		13.89	□□□□□ -0.19
PAX6-256	ENST00000639394	CCDC94	Q9BW85	323 aa	Predicted RBP	13.89	□□□□□ -0.19
PAX6-256	ENST00000639394	MAGI3	Q5TCQ9	1506 aa		13.88	□□□□□ -0.19
PAX6-256	ENST00000639394	MTUS2	Q5JR59	1369 aa		13.88	□□□□□ -0.19
PAX6-256	ENST00000639394	EHBP1L1	Q8N3D4	1523 aa		13.87	□□□□□ -0.19
PAX6-256	ENST00000639394	ARID3C	A6NKF2	412 aa		13.87	□□□□□ -0.19
PAX6-256	ENST00000639394	MS4A1	P11836	297 aa		13.87	□□□□□ -0.19
PAX6-256	ENST00000639394	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	13.87	□□□□□ -0.19
PAX6-256	ENST00000639394	HSP90AB3P	Q58FF7	597 aa		13.86	□□□□□ -0.19
PAX6-256	ENST00000639394	KIAA1211	Q6ZU35	1233 aa		13.86	□□□□□ -0.19
PAX6-256	ENST00000639394	EGFL6	Q8IUX8	553 aa		13.86	□□□□□ -0.19
PAX6-256	ENST00000639394	ABCC2	Q92887	1545 aa		13.86	□□□□□ -0.19
PAX6-256	ENST00000639394	MAFG	O15525	162 aa		13.85	□□□□□ -0.19
PAX6-256	ENST00000639394	GPATCH11	Q8N954	259 aa		13.85	□□□□□ -0.19
PAX6-256	ENST00000639394	CFAP44	Q96MT7	982 aa		13.85	□□□□□ -0.19
PAX6-256	ENST00000639394	ATP10B	O94823	1461 aa		13.85	□□□□□ -0.19
PAX6-256	ENST00000639394	SOX12	O15370	315 aa		13.85	□□□□□ -0.19
PAX6-256	ENST00000639394	ANAPC15	P60006	121 aa		13.85	□□□□□ -0.19
PAX6-256	ENST00000639394	B4GALNT3	Q6L9W6	998 aa		13.85	□□□□□ -0.19
PAX6-256	ENST00000639394	ISY1	Q9ULR0	285 aa	Known RBP	13.85	□□□□□ -0.19
PAX6-256	ENST00000639394	UHRF1BP1L	A0JNW5	1464 aa		13.84	□□□□□ -0.19
PAX6-256	ENST00000639394	NBPF11	Q86T75	865 aa		13.84	□□□□□ -0.19
PAX6-256	ENST00000639394	PPP6R1	Q9UPN7	881 aa		13.84	□□□□□ -0.19
PAX6-256	ENST00000639394	OS9	Q13438	667 aa	Predicted RBP	13.83	□□□□□ -0.19
PAX6-256	ENST00000639394	DYNC1I1	O14576	645 aa		13.83	□□□□□ -0.2
PAX6-256	ENST00000639394	NBPF1	Q3BBV0	1214 aa		13.83	□□□□□ -0.2
PAX6-256	ENST00000639394	PHLDB1	Q86UU1	1377 aa		13.82	□□□□□ -0.2
PAX6-256	ENST00000639394	TTC36	A6NLP5	189 aa		13.82	□□□□□ -0.2
PAX6-256	ENST00000639394	MAPK8IP2	Q13387	824 aa	Predicted RBP	13.82	□□□□□ -0.2
PAX6-256	ENST00000639394	OFD1	O75665	1012 aa		13.82	□□□□□ -0.2
PAX6-256	ENST00000639394	RIPK4	P57078	832 aa		13.82	□□□□□ -0.2
PAX6-256	ENST00000639394	TRIM52	Q96A61	297 aa		13.82	□□□□□ -0.2
PAX6-256	ENST00000639394	SUPT6H	Q7KZ85	1726 aa	Known RBP	13.81	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms