RNA–Protein interactions for RNA: ENST00000638696.1

PAX6-237, Transcript of paired box 6, humanhuman

TSL 5 BASIC

Gene PAX6, Length 1,203 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-237ENST00000638696 C3P01024 1663 aa20.35■□□□□ 0.85
PAX6-237ENST00000638696 SPATA31D1Q6ZQQ2 1576 aa20.35■□□□□ 0.85
PAX6-237ENST00000638696 SETD1BQ9UPS6 1966 aaKnown RBP20.35■□□□□ 0.85
PAX6-237ENST00000638696 KIF15Q9NS87 1388 aa20.34■□□□□ 0.85
PAX6-237ENST00000638696 CLTCQ00610 1675 aaKnown RBP20.32■□□□□ 0.84
PAX6-237ENST00000638696 ANKRD30AQ9BXX3 1397 aa20.32■□□□□ 0.84
PAX6-237ENST00000638696 SHANK2Q9UPX8 1470 aa20.31■□□□□ 0.84
PAX6-237ENST00000638696 NPATQ14207 1427 aa20.31■□□□□ 0.84
PAX6-237ENST00000638696 MROH2AA6NES4 1674 aa20.3■□□□□ 0.84
PAX6-237ENST00000638696 PREX1Q8TCU6 1659 aa20.29■□□□□ 0.84
PAX6-237ENST00000638696 DUOX2Q9NRD8 1548 aa20.29■□□□□ 0.84
PAX6-237ENST00000638696 DNMT1P26358 1616 aaKnown RBP20.29■□□□□ 0.84
PAX6-237ENST00000638696 FBXO31Q5XUX0 539 aaPredicted RBP20.28■□□□□ 0.84
PAX6-237ENST00000638696 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.28■□□□□ 0.84
PAX6-237ENST00000638696 PTPRKQ15262 1439 aa20.27■□□□□ 0.84
PAX6-237ENST00000638696 ITGAEP38570 1179 aa20.26■□□□□ 0.83
PAX6-237ENST00000638696 DMRT2Q9Y5R5 561 aa20.26■□□□□ 0.83
PAX6-237ENST00000638696 NCOA1Q15788 1441 aa20.26■□□□□ 0.83
PAX6-237ENST00000638696 KDM5DQ9BY66 1539 aa20.25■□□□□ 0.83
PAX6-237ENST00000638696 CROCC2H7BZ55 1655 aa20.25■□□□□ 0.83
PAX6-237ENST00000638696 ERBINQ96RT1 1412 aa20.23■□□□□ 0.83
PAX6-237ENST00000638696 FAM135AQ9P2D6 1515 aa20.22■□□□□ 0.83
PAX6-237ENST00000638696 EIF2AK4Q9P2K8 1649 aaKnown RBP20.21■□□□□ 0.83
PAX6-237ENST00000638696 STRCQ7RTU9 1775 aa20.21■□□□□ 0.83
PAX6-237ENST00000638696 KANK1Q14678 1352 aa20.2■□□□□ 0.82
PAX6-237ENST00000638696 TNRQ92752 1358 aa20.2■□□□□ 0.82
PAX6-237ENST00000638696 RNF17Q9BXT8 1623 aaKnown RBP20.2■□□□□ 0.82
PAX6-237ENST00000638696 PZPP20742 1482 aa20.19■□□□□ 0.82
PAX6-237ENST00000638696 ADGRL2O95490 1459 aa20.18■□□□□ 0.82
PAX6-237ENST00000638696 ABCC3O15438 1527 aa20.17■□□□□ 0.82
PAX6-237ENST00000638696 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.16■□□□□ 0.82
PAX6-237ENST00000638696 ANKRD50Q9ULJ7 1429 aa20.14■□□□□ 0.81
PAX6-237ENST00000638696 NCKAP5LQ9HCH0 1330 aa20.14■□□□□ 0.81
PAX6-237ENST00000638696 MROH1Q8NDA8 1641 aa20.13■□□□□ 0.81
PAX6-237ENST00000638696 ROCK1Q13464 1354 aa20.12■□□□□ 0.81
PAX6-237ENST00000638696 THEMISQ8N1K5 641 aaPredicted RBP20.12■□□□□ 0.81
PAX6-237ENST00000638696 A2ML1A8K2U0 1454 aa20.11■□□□□ 0.81
PAX6-237ENST00000638696 PKD2Q13563 968 aa20.11■□□□□ 0.81
PAX6-237ENST00000638696 CAMSAP1Q5T5Y3 1602 aa20.11■□□□□ 0.81
PAX6-237ENST00000638696 MYO3AQ8NEV4 1616 aa20.11■□□□□ 0.81
PAX6-237ENST00000638696 ZC3H13Q5T200 1668 aaKnown RBP20.1■□□□□ 0.81
PAX6-237ENST00000638696 CEP170BQ9Y4F5 1589 aaPredicted RBP20.1■□□□□ 0.81
PAX6-237ENST00000638696 PRDM15P57071 1507 aaPredicted RBP20.09■□□□□ 0.81
PAX6-237ENST00000638696 PTPRTO14522 1441 aa20.09■□□□□ 0.81
PAX6-237ENST00000638696 CEP152O94986 1710 aa20.07■□□□□ 0.8
PAX6-237ENST00000638696 NLRP1Q9C000 1473 aa20.07■□□□□ 0.8
PAX6-237ENST00000638696 ARHGAP31Q2M1Z3 1444 aa20.07■□□□□ 0.8
PAX6-237ENST00000638696 RRBP1Q9P2E9 1410 aaKnown RBP20.07■□□□□ 0.8
PAX6-237ENST00000638696 ERVK-7P63135 1459 aa20.06■□□□□ 0.8
PAX6-237ENST00000638696 LTBP4Q8N2S1 1624 aa20.06■□□□□ 0.8
PAX6-237ENST00000638696 CFAP65Q6ZU64 1925 aaKnown RBP20.06■□□□□ 0.8
PAX6-237ENST00000638696 DEPDC5O75140 1603 aa20.05■□□□□ 0.8
PAX6-237ENST00000638696 ANKLE2Q86XL3 938 aa20.05■□□□□ 0.8
PAX6-237ENST00000638696 ZNF142P52746 1687 aaPredicted RBP20.05■□□□□ 0.8
PAX6-237ENST00000638696 PLA2R1Q13018 1463 aa20.04■□□□□ 0.8
PAX6-237ENST00000638696 STAG3Q9UJ98 1225 aa20.02■□□□□ 0.8
PAX6-237ENST00000638696 IQSEC2Q5JU85 1478 aa20.02■□□□□ 0.8
PAX6-237ENST00000638696 UGGT1Q9NYU2 1555 aa20.01■□□□□ 0.79
PAX6-237ENST00000638696 LMTK2Q8IWU2 1503 aa20.01■□□□□ 0.79
PAX6-237ENST00000638696 VWDEQ8N2E2 1590 aa20■□□□□ 0.79
PAX6-237ENST00000638696 NUP155O75694 1391 aa19.99■□□□□ 0.79
PAX6-237ENST00000638696 UBAP1LF5GYI3 381 aa19.98■□□□□ 0.79
PAX6-237ENST00000638696 IDI1Q13907 227 aa19.98■□□□□ 0.79
PAX6-237ENST00000638696 SLC52A1Q9NWF4 448 aa19.95■□□□□ 0.78
PAX6-237ENST00000638696 TXNDC2Q86VQ3 553 aa19.94■□□□□ 0.78
PAX6-237ENST00000638696 EID1Q9Y6B2 187 aa19.94■□□□□ 0.78
PAX6-237ENST00000638696 EFCAB6Q5THR3 1501 aa19.93■□□□□ 0.78
PAX6-237ENST00000638696 ZNF335Q9H4Z2 1342 aaPredicted RBP19.93■□□□□ 0.78
PAX6-237ENST00000638696 NOS1P29475 1434 aa19.92■□□□□ 0.78
PAX6-237ENST00000638696 TRIM52Q96A61 297 aa19.91■□□□□ 0.78
PAX6-237ENST00000638696 RPRD2Q5VT52 1461 aaKnown RBP19.91■□□□□ 0.78
PAX6-237ENST00000638696 UNC13BO14795 1591 aa19.91■□□□□ 0.78
PAX6-237ENST00000638696 NAIPQ13075 1403 aa19.9■□□□□ 0.78
PAX6-237ENST00000638696 NPHP4O75161 1426 aaPredicted RBP19.89■□□□□ 0.77
PAX6-237ENST00000638696 LTKP29376 864 aa19.89■□□□□ 0.77
PAX6-237ENST00000638696 TET3O43151 1660 aa19.88■□□□□ 0.77
PAX6-237ENST00000638696 CHGAP10645 457 aaKnown RBP19.88■□□□□ 0.77
PAX6-237ENST00000638696 TMEM2Q9UHN6 1383 aa19.86■□□□□ 0.77
PAX6-237ENST00000638696 UBR1Q8IWV7 1749 aa19.86■□□□□ 0.77
PAX6-237ENST00000638696 SYNMO15061 1565 aa19.86■□□□□ 0.77
PAX6-237ENST00000638696 POLR1AO95602 1720 aaPredicted RBP19.85■□□□□ 0.77
PAX6-237ENST00000638696 PIK3C2BO00750 1634 aa19.85■□□□□ 0.77
PAX6-237ENST00000638696 MED14O60244 1454 aa19.85■□□□□ 0.77
PAX6-237ENST00000638696 HFM1A2PYH4 1435 aa19.85■□□□□ 0.77
PAX6-237ENST00000638696 IQGAP3Q86VI3 1631 aa19.84■□□□□ 0.77
PAX6-237ENST00000638696 SCAF1Q9H7N4 1312 aaKnown RBP19.84■□□□□ 0.77
PAX6-237ENST00000638696 NEURL4Q96JN8 1562 aa19.84■□□□□ 0.77
PAX6-237ENST00000638696 HDGFP51858 240 aaKnown RBP19.83■□□□□ 0.77
PAX6-237ENST00000638696 SCAF11Q99590 1463 aaKnown RBP19.83■□□□□ 0.76
PAX6-237ENST00000638696 GCC2Q8IWJ2 1684 aa19.83■□□□□ 0.76
PAX6-237ENST00000638696 BCANQ96GW7 911 aa19.82■□□□□ 0.76
PAX6-237ENST00000638696 MED1Q15648 1581 aaPredicted RBP19.82■□□□□ 0.76
PAX6-237ENST00000638696 SLIT1O75093 1534 aa19.81■□□□□ 0.76
PAX6-237ENST00000638696 ARHGAP23Q9P227 1491 aa19.81■□□□□ 0.76
PAX6-237ENST00000638696 HSPA1LP34931 641 aa19.81■□□□□ 0.76
PAX6-237ENST00000638696 SLC4A1APQ9BWU0 796 aaKnown RBP19.8■□□□□ 0.76
PAX6-237ENST00000638696 E9PCH4 1651 aa19.8■□□□□ 0.76
PAX6-237ENST00000638696 PIP4K2BP78356 416 aa19.79■□□□□ 0.76
PAX6-237ENST00000638696 PPP1R15AO75807 674 aaPredicted RBP19.78■□□□□ 0.76
PAX6-237ENST00000638696 SENP3Q9H4L4 574 aaPredicted RBP19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms