RNA–Protein interactions for RNA: ENST00000638488.1

GFAP-228, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5

Gene GFAP, Length 2,641 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-228ENST00000638488 CNTLNQ9NXG0 1405 aa16.16■□□□□ 0.18
GFAP-228ENST00000638488 KIF15Q9NS87 1388 aa16.16■□□□□ 0.18
GFAP-228ENST00000638488 ARHGAP5Q13017 1502 aa16.14■□□□□ 0.17
GFAP-228ENST00000638488 CDC42BPBQ9Y5S2 1711 aa16.14■□□□□ 0.17
GFAP-228ENST00000638488 KIAA1107Q9UPP5 1409 aa16.14■□□□□ 0.17
GFAP-228ENST00000638488 TCERG1O14776 1098 aaKnown RBP16.14■□□□□ 0.17
GFAP-228ENST00000638488 SAMD9LQ8IVG5 1584 aa16.13■□□□□ 0.17
GFAP-228ENST00000638488 TEX14Q8IWB6 1497 aa16.13■□□□□ 0.17
GFAP-228ENST00000638488 TTC37Q6PGP7 1564 aa16.13■□□□□ 0.17
GFAP-228ENST00000638488 ABCC2Q92887 1545 aa16.12■□□□□ 0.17
GFAP-228ENST00000638488 MBD5Q9P267 1494 aa16.12■□□□□ 0.17
GFAP-228ENST00000638488 SHANK2Q9UPX8 1470 aa16.12■□□□□ 0.17
GFAP-228ENST00000638488 PREX2Q70Z35 1606 aa16.11■□□□□ 0.17
GFAP-228ENST00000638488 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.11■□□□□ 0.17
GFAP-228ENST00000638488 CCDC141Q6ZP82 1450 aa16.11■□□□□ 0.17
GFAP-228ENST00000638488 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.11■□□□□ 0.17
GFAP-228ENST00000638488 SYCP2Q9BX26 1530 aa16.1■□□□□ 0.17
GFAP-228ENST00000638488 DDRGK1Q96HY6 314 aa16.1■□□□□ 0.17
GFAP-228ENST00000638488 MS4A1P11836 297 aa16.09■□□□□ 0.17
GFAP-228ENST00000638488 NUDCQ9Y266 331 aa16.09■□□□□ 0.17
GFAP-228ENST00000638488 CCDC184Q52MB2 194 aa16.08■□□□□ 0.16
GFAP-228ENST00000638488 KDM2AQ9Y2K7 1162 aa16.08■□□□□ 0.16
GFAP-228ENST00000638488 POLR3GLQ9BT43 218 aa16.07■□□□□ 0.16
GFAP-228ENST00000638488 PRKRIP1Q9H875 184 aaPredicted RBP16.07■□□□□ 0.16
GFAP-228ENST00000638488 ARHGEF5Q12774 1597 aa16.07■□□□□ 0.16
GFAP-228ENST00000638488 NPM2Q86SE8 214 aaKnown RBP16.07■□□□□ 0.16
GFAP-228ENST00000638488 CLASP1Q7Z460 1538 aa16.06■□□□□ 0.16
GFAP-228ENST00000638488 FAM9BQ8IZU0 186 aa16.06■□□□□ 0.16
GFAP-228ENST00000638488 FRAT1Q92837 279 aaPredicted RBP16.06■□□□□ 0.16
GFAP-228ENST00000638488 MRS2Q9HD23 443 aa16.06■□□□□ 0.16
GFAP-228ENST00000638488 PDE4AP27815 886 aa16.06■□□□□ 0.16
GFAP-228ENST00000638488 BACH2Q9BYV9 841 aa16.06■□□□□ 0.16
GFAP-228ENST00000638488 ZMYND15Q9H091 742 aa16.05■□□□□ 0.16
GFAP-228ENST00000638488 CNGB1Q14028 1251 aaPredicted RBP16.05■□□□□ 0.16
GFAP-228ENST00000638488 RSPH4AQ5TD94 716 aa16.05■□□□□ 0.16
GFAP-228ENST00000638488 ZCCHC11Q5TAX3 1644 aaKnown RBP16.04■□□□□ 0.16
GFAP-228ENST00000638488 NFKBIBQ15653 356 aa16.04■□□□□ 0.16
GFAP-228ENST00000638488 MYO5CQ9NQX4 1742 aa16.03■□□□□ 0.16
GFAP-228ENST00000638488 CCDC7Q96M83 1385 aa16.02■□□□□ 0.15
GFAP-228ENST00000638488 DCAF11Q8TEB1 546 aa16.01■□□□□ 0.15
GFAP-228ENST00000638488 EFCAB2Q5VUJ9 269 aa16■□□□□ 0.15
GFAP-228ENST00000638488 VSIG10Q8N0Z9 540 aa16■□□□□ 0.15
GFAP-228ENST00000638488 AEBP2Q6ZN18 517 aaPredicted RBP15.99■□□□□ 0.15
GFAP-228ENST00000638488 RGL3Q3MIN7 710 aa15.99■□□□□ 0.15
GFAP-228ENST00000638488 KIF7Q2M1P5 1343 aa15.99■□□□□ 0.15
GFAP-228ENST00000638488 ARHGEF12Q9NZN5 1544 aa15.99■□□□□ 0.15
GFAP-228ENST00000638488 FAM135AQ9P2D6 1515 aa15.98■□□□□ 0.15
GFAP-228ENST00000638488 POLR1AO95602 1720 aaPredicted RBP15.98■□□□□ 0.15
GFAP-228ENST00000638488 PODXL2Q9NZ53 605 aa15.98■□□□□ 0.15
GFAP-228ENST00000638488 PLEKHH2Q8IVE3 1493 aa15.97■□□□□ 0.15
GFAP-228ENST00000638488 PLCH2O75038 1416 aa15.97■□□□□ 0.15
GFAP-228ENST00000638488 USP47Q96K76 1375 aa15.97■□□□□ 0.15
GFAP-228ENST00000638488 KDM5DQ9BY66 1539 aa15.97■□□□□ 0.15
GFAP-228ENST00000638488 SPATA31E1Q6ZUB1 1445 aa15.96■□□□□ 0.15
GFAP-228ENST00000638488 CARD11Q9BXL7 1154 aa15.96■□□□□ 0.15
GFAP-228ENST00000638488 RRP9O43818 475 aaKnown RBP15.96■□□□□ 0.14
GFAP-228ENST00000638488 AFAP1Q8N556 730 aa15.95■□□□□ 0.14
GFAP-228ENST00000638488 UHRF1BP1LA0JNW5 1464 aa15.95■□□□□ 0.14
GFAP-228ENST00000638488 TRAPPC8Q9Y2L5 1435 aa15.94■□□□□ 0.14
GFAP-228ENST00000638488 CCDC144AA2RUR9 1427 aa15.93■□□□□ 0.14
GFAP-228ENST00000638488 MAST1Q9Y2H9 1570 aa15.92■□□□□ 0.14
GFAP-228ENST00000638488 SPAG9O60271 1321 aaKnown RBP15.91■□□□□ 0.14
GFAP-228ENST00000638488 HSP90AA2PQ14568 343 aaPredicted RBP15.89■□□□□ 0.13
GFAP-228ENST00000638488 ABCC1P33527 1531 aa15.89■□□□□ 0.13
GFAP-228ENST00000638488 DUOX2Q9NRD8 1548 aa15.88■□□□□ 0.13
GFAP-228ENST00000638488 PLXNC1O60486 1568 aa15.88■□□□□ 0.13
GFAP-228ENST00000638488 ROCK2O75116 1388 aaKnown RBP15.88■□□□□ 0.13
GFAP-228ENST00000638488 BCORL1Q5H9F3 1711 aa15.88■□□□□ 0.13
GFAP-228ENST00000638488 ST20-MTHFSA0A0A6YYL1 179 aa15.88■□□□□ 0.13
GFAP-228ENST00000638488 WDR7Q9Y4E6 1490 aa15.87■□□□□ 0.13
GFAP-228ENST00000638488 UHRF1BP1Q6BDS2 1440 aa15.87■□□□□ 0.13
GFAP-228ENST00000638488 RALGAPBQ86X10 1494 aa15.87■□□□□ 0.13
GFAP-228ENST00000638488 UNC13BO14795 1591 aa15.87■□□□□ 0.13
GFAP-228ENST00000638488 KDM5CP41229 1560 aa15.87■□□□□ 0.13
GFAP-228ENST00000638488 RRP1P56182 461 aaKnown RBP15.86■□□□□ 0.13
GFAP-228ENST00000638488 RRAGDQ9NQL2 400 aaPredicted RBP15.86■□□□□ 0.13
GFAP-228ENST00000638488 PLA2R1Q13018 1463 aa15.85■□□□□ 0.13
GFAP-228ENST00000638488 OSCARQ8IYS5 282 aa15.85■□□□□ 0.13
GFAP-228ENST00000638488 ERBINQ96RT1 1412 aa15.85■□□□□ 0.13
GFAP-228ENST00000638488 HSP90AA1P07900 732 aaKnown RBP15.84■□□□□ 0.13
GFAP-228ENST00000638488 FANCAO15360 1455 aa15.84■□□□□ 0.13
GFAP-228ENST00000638488 PLEKHG5O94827 1062 aa15.83■□□□□ 0.13
GFAP-228ENST00000638488 NBPF1Q3BBV0 1214 aa15.83■□□□□ 0.13
GFAP-228ENST00000638488 L1TD1Q5T7N2 865 aaKnown RBP15.83■□□□□ 0.13
GFAP-228ENST00000638488 IQGAP3Q86VI3 1631 aa15.83■□□□□ 0.12
GFAP-228ENST00000638488 NPM1P06748 294 aaKnown RBP eCLIP15.82■□□□□ 0.12
GFAP-228ENST00000638488 EXOC6Q8TAG9 804 aa15.82■□□□□ 0.12
GFAP-228ENST00000638488 ASXL2Q76L83 1435 aa15.82■□□□□ 0.12
GFAP-228ENST00000638488 FRAT2O75474 233 aaPredicted RBP15.81■□□□□ 0.12
GFAP-228ENST00000638488 SCAPERQ9BY12 1400 aa15.8■□□□□ 0.12
GFAP-228ENST00000638488 KIF3BO15066 747 aa15.8■□□□□ 0.12
GFAP-228ENST00000638488 A2MP01023 1474 aa15.79■□□□□ 0.12
GFAP-228ENST00000638488 PRAG1Q86YV5 1406 aa15.79■□□□□ 0.12
GFAP-228ENST00000638488 ADGRL1O94910 1474 aa15.79■□□□□ 0.12
GFAP-228ENST00000638488 CLCN1P35523 988 aa15.79■□□□□ 0.12
GFAP-228ENST00000638488 PNNQ9H307 717 aaKnown RBP15.79■□□□□ 0.12
GFAP-228ENST00000638488 ZFYVE16Q7Z3T8 1539 aa15.78■□□□□ 0.12
GFAP-228ENST00000638488 SENP3-EIF4A1A0A087X0R7 540 aa15.78■□□□□ 0.12
GFAP-228ENST00000638488 NAP1L5Q96NT1 182 aaPredicted RBP15.78■□□□□ 0.12
GFAP-228ENST00000638488 DHX29Q7Z478 1369 aaKnown RBP15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms