RNA–Protein interactions for RNA: ENST00000638157.1

GRAMD1B-216, Transcript of GRAM domain containing 1B, humanhuman

TSL 5 BASIC

Gene GRAMD1B, Length 3,849 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1B-216ENST00000638157 CHD1O14646 1710 aa17.04■□□□□ 0.32
GRAMD1B-216ENST00000638157 RSPH4AQ5TD94 716 aa17.04■□□□□ 0.32
GRAMD1B-216ENST00000638157 RAPGEF3O95398 923 aa17.03■□□□□ 0.32
GRAMD1B-216ENST00000638157 PKD2Q13563 968 aa17.03■□□□□ 0.32
GRAMD1B-216ENST00000638157 NUP155O75694 1391 aa17.02■□□□□ 0.32
GRAMD1B-216ENST00000638157 PRKRIP1Q9H875 184 aaPredicted RBP17.02■□□□□ 0.32
GRAMD1B-216ENST00000638157 ARHGAP5Q13017 1502 aa17.01■□□□□ 0.31
GRAMD1B-216ENST00000638157 MPHOSPH9Q99550 1183 aa17■□□□□ 0.31
GRAMD1B-216ENST00000638157 EHBP1L1Q8N3D4 1523 aa17■□□□□ 0.31
GRAMD1B-216ENST00000638157 ZBED9Q6R2W3 1325 aa17■□□□□ 0.31
GRAMD1B-216ENST00000638157 CANXP27824 592 aaKnown RBP17■□□□□ 0.31
GRAMD1B-216ENST00000638157 RAPGEF6Q8TEU7 1601 aa16.98■□□□□ 0.31
GRAMD1B-216ENST00000638157 FAM43AQ8N2R8 423 aa16.98■□□□□ 0.31
GRAMD1B-216ENST00000638157 RCAN3Q9UKA8 241 aa16.98■□□□□ 0.31
GRAMD1B-216ENST00000638157 ERCC6L2Q5T890 1561 aa16.97■□□□□ 0.31
GRAMD1B-216ENST00000638157 WASHC2AQ641Q2 1341 aa16.97■□□□□ 0.31
GRAMD1B-216ENST00000638157 POGKQ9P215 609 aa16.97■□□□□ 0.31
GRAMD1B-216ENST00000638157 RRBP1Q9P2E9 1410 aaKnown RBP16.96■□□□□ 0.31
GRAMD1B-216ENST00000638157 BACH2Q9BYV9 841 aa16.94■□□□□ 0.3
GRAMD1B-216ENST00000638157 DCAF11Q8TEB1 546 aa16.93■□□□□ 0.3
GRAMD1B-216ENST00000638157 ASXL2Q76L83 1435 aa16.93■□□□□ 0.3
GRAMD1B-216ENST00000638157 SAMD9Q5K651 1589 aa16.93■□□□□ 0.3
GRAMD1B-216ENST00000638157 L1TD1Q5T7N2 865 aaKnown RBP16.92■□□□□ 0.3
GRAMD1B-216ENST00000638157 CD109Q6YHK3 1445 aa16.92■□□□□ 0.3
GRAMD1B-216ENST00000638157 KIF15Q9NS87 1388 aa16.92■□□□□ 0.3
GRAMD1B-216ENST00000638157 SUPT6HQ7KZ85 1726 aaKnown RBP16.91■□□□□ 0.3
GRAMD1B-216ENST00000638157 SCAPERQ9BY12 1400 aa16.91■□□□□ 0.3
GRAMD1B-216ENST00000638157 GOLGA6L3A6NEY3 463 aa16.91■□□□□ 0.3
GRAMD1B-216ENST00000638157 RBM10P98175 930 aaKnown RBP16.91■□□□□ 0.3
GRAMD1B-216ENST00000638157 UPF2Q9HAU5 1272 aaKnown RBP16.9■□□□□ 0.3
GRAMD1B-216ENST00000638157 WASHC2CQ9Y4E1 1318 aa16.9■□□□□ 0.3
GRAMD1B-216ENST00000638157 BECN1Q14457 450 aa16.9■□□□□ 0.3
GRAMD1B-216ENST00000638157 ANP32BQ92688 251 aaKnown RBP16.89■□□□□ 0.29
GRAMD1B-216ENST00000638157 MIA2Q96PC5 1412 aa16.89■□□□□ 0.29
GRAMD1B-216ENST00000638157 MAP3K1Q13233 1512 aa16.89■□□□□ 0.29
GRAMD1B-216ENST00000638157 KANK1Q14678 1352 aa16.89■□□□□ 0.29
GRAMD1B-216ENST00000638157 RRP1P56182 461 aaKnown RBP16.88■□□□□ 0.29
GRAMD1B-216ENST00000638157 CRBNQ96SW2 442 aa16.87■□□□□ 0.29
GRAMD1B-216ENST00000638157 RRAGDQ9NQL2 400 aaPredicted RBP16.87■□□□□ 0.29
GRAMD1B-216ENST00000638157 FAM13BQ9NYF5 915 aa16.87■□□□□ 0.29
GRAMD1B-216ENST00000638157 GPATCH8Q9UKJ3 1502 aaKnown RBP16.85■□□□□ 0.29
GRAMD1B-216ENST00000638157 ABCC2Q92887 1545 aa16.85■□□□□ 0.29
GRAMD1B-216ENST00000638157 ANKRD50Q9ULJ7 1429 aa16.84■□□□□ 0.29
GRAMD1B-216ENST00000638157 NCLP19338 710 aaKnown RBP16.83■□□□□ 0.29
GRAMD1B-216ENST00000638157 C9orf84Q5VXU9 1444 aa16.83■□□□□ 0.28
GRAMD1B-216ENST00000638157 MYH16Q9H6N6 1097 aa16.83■□□□□ 0.28
GRAMD1B-216ENST00000638157 KIF14Q15058 1648 aa16.83■□□□□ 0.28
GRAMD1B-216ENST00000638157 DAPK1P53355 1430 aa16.82■□□□□ 0.28
GRAMD1B-216ENST00000638157 CDCA7LQ96GN5 454 aa16.81■□□□□ 0.28
GRAMD1B-216ENST00000638157 CAMSAP2Q08AD1 1489 aa16.8■□□□□ 0.28
GRAMD1B-216ENST00000638157 L3MBTL2Q969R5 705 aa16.8■□□□□ 0.28
GRAMD1B-216ENST00000638157 WDR7Q9Y4E6 1490 aa16.8■□□□□ 0.28
GRAMD1B-216ENST00000638157 TPRNQ4KMQ1 711 aa16.8■□□□□ 0.28
GRAMD1B-216ENST00000638157 NUTM2DQ5VT03 806 aaPredicted RBP16.8■□□□□ 0.28
GRAMD1B-216ENST00000638157 ABCC5O15440 1437 aa16.79■□□□□ 0.28
GRAMD1B-216ENST00000638157 MAGI3Q5TCQ9 1506 aa16.79■□□□□ 0.28
GRAMD1B-216ENST00000638157 CC2D1BQ5T0F9 858 aaKnown RBP16.78■□□□□ 0.28
GRAMD1B-216ENST00000638157 PANK2Q9BZ23 570 aa16.78■□□□□ 0.28
GRAMD1B-216ENST00000638157 FANCAO15360 1455 aa16.78■□□□□ 0.28
GRAMD1B-216ENST00000638157 RRP9O43818 475 aaKnown RBP16.77■□□□□ 0.28
GRAMD1B-216ENST00000638157 PTPN23Q9H3S7 1636 aa16.77■□□□□ 0.28
GRAMD1B-216ENST00000638157 PRDM10Q9NQV6 1147 aa16.77■□□□□ 0.27
GRAMD1B-216ENST00000638157 PTPRKQ15262 1439 aa16.76■□□□□ 0.27
GRAMD1B-216ENST00000638157 ADGRL1O94910 1474 aa16.76■□□□□ 0.27
GRAMD1B-216ENST00000638157 FOXD4L1Q9NU39 408 aa16.76■□□□□ 0.27
GRAMD1B-216ENST00000638157 MS4A1P11836 297 aa16.75■□□□□ 0.27
GRAMD1B-216ENST00000638157 MAPK8IP2Q13387 824 aaPredicted RBP16.75■□□□□ 0.27
GRAMD1B-216ENST00000638157 FAM161AQ3B820 660 aa16.75■□□□□ 0.27
GRAMD1B-216ENST00000638157 DNTTIP2Q5QJE6 756 aaKnown RBP16.75■□□□□ 0.27
GRAMD1B-216ENST00000638157 PLCH2O75038 1416 aa16.74■□□□□ 0.27
GRAMD1B-216ENST00000638157 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.74■□□□□ 0.27
GRAMD1B-216ENST00000638157 NAIPQ13075 1403 aa16.74■□□□□ 0.27
GRAMD1B-216ENST00000638157 ABCA8O94911 1581 aa16.73■□□□□ 0.27
GRAMD1B-216ENST00000638157 MSNP26038 577 aaKnown RBP16.73■□□□□ 0.27
GRAMD1B-216ENST00000638157 CARD11Q9BXL7 1154 aa16.73■□□□□ 0.27
GRAMD1B-216ENST00000638157 ZHX1Q9UKY1 873 aaPredicted RBP16.73■□□□□ 0.27
GRAMD1B-216ENST00000638157 PLEKHH2Q8IVE3 1493 aa16.72■□□□□ 0.27
GRAMD1B-216ENST00000638157 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.72■□□□□ 0.27
GRAMD1B-216ENST00000638157 HFM1A2PYH4 1435 aa16.72■□□□□ 0.27
GRAMD1B-216ENST00000638157 CCDC141Q6ZP82 1450 aa16.71■□□□□ 0.27
GRAMD1B-216ENST00000638157 CLASP1Q7Z460 1538 aa16.7■□□□□ 0.26
GRAMD1B-216ENST00000638157 TNNT2P45379 298 aaPredicted RBP16.69■□□□□ 0.26
GRAMD1B-216ENST00000638157 NCOA1Q15788 1441 aa16.69■□□□□ 0.26
GRAMD1B-216ENST00000638157 CFAP43Q8NDM7 1665 aa16.69■□□□□ 0.26
GRAMD1B-216ENST00000638157 TRAPPC8Q9Y2L5 1435 aa16.69■□□□□ 0.26
GRAMD1B-216ENST00000638157 NEUROD2Q15784 382 aa16.68■□□□□ 0.26
GRAMD1B-216ENST00000638157 DNAJC5Q9H3Z4 198 aa16.67■□□□□ 0.26
GRAMD1B-216ENST00000638157 KIF7Q2M1P5 1343 aa16.67■□□□□ 0.26
GRAMD1B-216ENST00000638157 KDM5BQ9UGL1 1544 aa16.66■□□□□ 0.26
GRAMD1B-216ENST00000638157 WDR43Q15061 677 aaKnown RBP eCLIP16.66■□□□□ 0.26
GRAMD1B-216ENST00000638157 C20orf194Q5TEA3 1177 aa16.66■□□□□ 0.26
GRAMD1B-216ENST00000638157 R3HCC1Q9Y3T6 440 aaKnown RBP16.66■□□□□ 0.26
GRAMD1B-216ENST00000638157 KIAA1211Q6ZU35 1233 aa16.65■□□□□ 0.26
GRAMD1B-216ENST00000638157 SYCP2Q9BX26 1530 aa16.65■□□□□ 0.26
GRAMD1B-216ENST00000638157 SAFB2Q14151 953 aaKnown RBP eCLIP16.64■□□□□ 0.25
GRAMD1B-216ENST00000638157 ESPNB1AK53 854 aa16.64■□□□□ 0.25
GRAMD1B-216ENST00000638157 PTMAP06454 111 aaKnown RBP16.64■□□□□ 0.25
GRAMD1B-216ENST00000638157 DENND4BO75064 1496 aaPredicted RBP16.63■□□□□ 0.25
GRAMD1B-216ENST00000638157 CCDC144AA2RUR9 1427 aa16.63■□□□□ 0.25
GRAMD1B-216ENST00000638157 CCDC7Q96M83 1385 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms