RNA–Protein interactions for RNA: ENST00000638112.1

GABRA1-219, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

APPRIS P1 TSL 5 BASIC

Gene GABRA1, Length 2,818 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-219ENST00000638112 SKAP1Q86WV1 359 aa12.16□□□□□ -0.46
GABRA1-219ENST00000638112 COL17A1Q9UMD9 1497 aaPredicted RBP12.15□□□□□ -0.46
GABRA1-219ENST00000638112 TCERG1O14776 1098 aaKnown RBP12.15□□□□□ -0.46
GABRA1-219ENST00000638112 PLCH2O75038 1416 aa12.15□□□□□ -0.46
GABRA1-219ENST00000638112 SETD5Q9C0A6 1442 aa12.15□□□□□ -0.46
GABRA1-219ENST00000638112 MAP3K1Q13233 1512 aa12.15□□□□□ -0.46
GABRA1-219ENST00000638112 EHBP1L1Q8N3D4 1523 aa12.15□□□□□ -0.46
GABRA1-219ENST00000638112 DDRGK1Q96HY6 314 aa12.15□□□□□ -0.47
GABRA1-219ENST00000638112 TEX14Q8IWB6 1497 aa12.14□□□□□ -0.47
GABRA1-219ENST00000638112 SMG6Q86US8 1419 aaKnown RBP12.13□□□□□ -0.47
GABRA1-219ENST00000638112 MS4A1P11836 297 aa12.12□□□□□ -0.47
GABRA1-219ENST00000638112 FANCAO15360 1455 aa12.12□□□□□ -0.47
GABRA1-219ENST00000638112 NCOA2Q15596 1464 aa12.12□□□□□ -0.47
GABRA1-219ENST00000638112 GPATCH8Q9UKJ3 1502 aaKnown RBP12.12□□□□□ -0.47
GABRA1-219ENST00000638112 BACH2Q9BYV9 841 aa12.12□□□□□ -0.47
GABRA1-219ENST00000638112 EFCAB2Q5VUJ9 269 aa12.11□□□□□ -0.47
GABRA1-219ENST00000638112 ZNF777Q9ULD5 760 aaPredicted RBP12.11□□□□□ -0.47
GABRA1-219ENST00000638112 MYO5CQ9NQX4 1742 aa12.11□□□□□ -0.47
GABRA1-219ENST00000638112 RAPGEF3O95398 923 aa12.1□□□□□ -0.47
GABRA1-219ENST00000638112 MRS2Q9HD23 443 aa12.1□□□□□ -0.47
GABRA1-219ENST00000638112 PRDM4Q9UKN5 801 aa12.1□□□□□ -0.47
GABRA1-219ENST00000638112 ARHGAP5Q13017 1502 aa12.1□□□□□ -0.47
GABRA1-219ENST00000638112 POGKQ9P215 609 aa12.1□□□□□ -0.47
GABRA1-219ENST00000638112 CDC42BPAQ5VT25 1732 aa12.1□□□□□ -0.47
GABRA1-219ENST00000638112 CDC42BPBQ9Y5S2 1711 aa12.1□□□□□ -0.47
GABRA1-219ENST00000638112 KDM6BO15054 1643 aa12.1□□□□□ -0.47
GABRA1-219ENST00000638112 CFDP1Q9UEE9 299 aaPredicted RBP12.1□□□□□ -0.47
GABRA1-219ENST00000638112 NEO1Q92859 1461 aa12.09□□□□□ -0.47
GABRA1-219ENST00000638112 SUPT6HQ7KZ85 1726 aaKnown RBP12.09□□□□□ -0.47
GABRA1-219ENST00000638112 ZNF644Q9H582 1327 aaPredicted RBP12.09□□□□□ -0.47
GABRA1-219ENST00000638112 PREX2Q70Z35 1606 aa12.08□□□□□ -0.48
GABRA1-219ENST00000638112 ARAP3Q8WWN8 1544 aa12.07□□□□□ -0.48
GABRA1-219ENST00000638112 SCAPERQ9BY12 1400 aa12.07□□□□□ -0.48
GABRA1-219ENST00000638112 PHLDB1Q86UU1 1377 aa12.07□□□□□ -0.48
GABRA1-219ENST00000638112 ADGRL1O94910 1474 aa12.06□□□□□ -0.48
GABRA1-219ENST00000638112 ARID3AQ99856 593 aa12.05□□□□□ -0.48
GABRA1-219ENST00000638112 NUDCQ9Y266 331 aa12.05□□□□□ -0.48
GABRA1-219ENST00000638112 HNRNPMP52272 730 aaKnown RBP eCLIP12.05□□□□□ -0.48
GABRA1-219ENST00000638112 AFAP1Q8N556 730 aa12.05□□□□□ -0.48
GABRA1-219ENST00000638112 ARHGEF12Q9NZN5 1544 aa12.04□□□□□ -0.48
GABRA1-219ENST00000638112 EXOC6Q8TAG9 804 aa12.04□□□□□ -0.48
GABRA1-219ENST00000638112 BBXQ8WY36 941 aaPredicted RBP12.04□□□□□ -0.48
GABRA1-219ENST00000638112 DENND4BO75064 1496 aaPredicted RBP12.03□□□□□ -0.48
GABRA1-219ENST00000638112 SAMD9LQ8IVG5 1584 aa12.03□□□□□ -0.48
GABRA1-219ENST00000638112 MYOM3Q5VTT5 1437 aa12.03□□□□□ -0.48
GABRA1-219ENST00000638112 CFAP74Q9C0B2 1584 aa12.02□□□□□ -0.48
GABRA1-219ENST00000638112 PANK2Q9BZ23 570 aa12.02□□□□□ -0.49
GABRA1-219ENST00000638112 CHMP4BQ9H444 224 aaKnown RBP12.02□□□□□ -0.49
GABRA1-219ENST00000638112 CNTLNQ9NXG0 1405 aa12.02□□□□□ -0.49
GABRA1-219ENST00000638112 TRAPPC8Q9Y2L5 1435 aa12.02□□□□□ -0.49
GABRA1-219ENST00000638112 TONSLQ96HA7 1378 aa12.02□□□□□ -0.49
GABRA1-219ENST00000638112 FRMPD1Q5SYB0 1578 aa12.01□□□□□ -0.49
GABRA1-219ENST00000638112 ITSN2Q9NZM3 1697 aa12.01□□□□□ -0.49
GABRA1-219ENST00000638112 CLCN1P35523 988 aa12.01□□□□□ -0.49
GABRA1-219ENST00000638112 PRKRIP1Q9H875 184 aaPredicted RBP12.01□□□□□ -0.49
GABRA1-219ENST00000638112 ZHX1Q9UKY1 873 aaPredicted RBP12.01□□□□□ -0.49
GABRA1-219ENST00000638112 ABCC1P33527 1531 aa12.01□□□□□ -0.49
GABRA1-219ENST00000638112 CENPJQ9HC77 1338 aaPredicted RBP12□□□□□ -0.49
GABRA1-219ENST00000638112 POGZQ7Z3K3 1410 aa12□□□□□ -0.49
GABRA1-219ENST00000638112 CALD1Q05682 793 aaKnown RBP12□□□□□ -0.49
GABRA1-219ENST00000638112 SYCP2Q9BX26 1530 aa12□□□□□ -0.49
GABRA1-219ENST00000638112 RICTORQ6R327 1708 aa11.99□□□□□ -0.49
GABRA1-219ENST00000638112 L1TD1Q5T7N2 865 aaKnown RBP11.99□□□□□ -0.49
GABRA1-219ENST00000638112 CAMSAP2Q08AD1 1489 aa11.98□□□□□ -0.49
GABRA1-219ENST00000638112 PDCL3Q9H2J4 239 aa11.98□□□□□ -0.49
GABRA1-219ENST00000638112 FGD6Q6ZV73 1430 aa11.98□□□□□ -0.49
GABRA1-219ENST00000638112 MBD5Q9P267 1494 aa11.98□□□□□ -0.49
GABRA1-219ENST00000638112 GZF1Q9H116 711 aaPredicted RBP11.97□□□□□ -0.49
GABRA1-219ENST00000638112 NAP1L2Q9ULW6 460 aaPredicted RBP11.97□□□□□ -0.49
GABRA1-219ENST00000638112 MIA2Q96PC5 1412 aa11.97□□□□□ -0.49
GABRA1-219ENST00000638112 KIAA1107Q9UPP5 1409 aa11.97□□□□□ -0.49
GABRA1-219ENST00000638112 PAXIP1Q6ZW49 1069 aaPredicted RBP11.97□□□□□ -0.49
GABRA1-219ENST00000638112 YEATS2Q9ULM3 1422 aa11.97□□□□□ -0.49
GABRA1-219ENST00000638112 ZNF518AQ6AHZ1 1483 aa11.97□□□□□ -0.49
GABRA1-219ENST00000638112 XRCC6P12956 609 aaKnown RBP eCLIP11.96□□□□□ -0.49
GABRA1-219ENST00000638112 PRDM10Q9NQV6 1147 aa11.96□□□□□ -0.49
GABRA1-219ENST00000638112 PLEKHH2Q8IVE3 1493 aa11.96□□□□□ -0.5
GABRA1-219ENST00000638112 FAM50AQ14320 339 aaKnown RBP11.95□□□□□ -0.5
GABRA1-219ENST00000638112 PTPN23Q9H3S7 1636 aa11.94□□□□□ -0.5
GABRA1-219ENST00000638112 SPAG9O60271 1321 aaKnown RBP11.94□□□□□ -0.5
GABRA1-219ENST00000638112 GTF2E1P29083 439 aaPredicted RBP11.94□□□□□ -0.5
GABRA1-219ENST00000638112 KDM5CP41229 1560 aa11.94□□□□□ -0.5
GABRA1-219ENST00000638112 ZMYM4Q5VZL5 1548 aa11.93□□□□□ -0.5
GABRA1-219ENST00000638112 HSPA5P11021 654 aaKnown RBP11.92□□□□□ -0.5
GABRA1-219ENST00000638112 SLKQ9H2G2 1235 aaPredicted RBP11.92□□□□□ -0.5
GABRA1-219ENST00000638112 ERBB4Q15303 1308 aa11.91□□□□□ -0.5
GABRA1-219ENST00000638112 TCOF1Q13428 1488 aaKnown RBP11.91□□□□□ -0.5
GABRA1-219ENST00000638112 CCDC141Q6ZP82 1450 aa11.91□□□□□ -0.5
GABRA1-219ENST00000638112 MLH3Q9UHC1 1453 aa11.91□□□□□ -0.5
GABRA1-219ENST00000638112 ZFYVE16Q7Z3T8 1539 aa11.91□□□□□ -0.5
GABRA1-219ENST00000638112 MAGI2Q86UL8 1455 aa11.9□□□□□ -0.5
GABRA1-219ENST00000638112 GOLGA6L3A6NEY3 463 aa11.9□□□□□ -0.5
GABRA1-219ENST00000638112 TSPY4P0CV99 314 aa11.9□□□□□ -0.5
GABRA1-219ENST00000638112 TSPY10P0CW01 314 aa11.9□□□□□ -0.5
GABRA1-219ENST00000638112 AMER1Q5JTC6 1135 aaPredicted RBP11.9□□□□□ -0.5
GABRA1-219ENST00000638112 RSPH4AQ5TD94 716 aa11.9□□□□□ -0.5
GABRA1-219ENST00000638112 KIDINS220Q9ULH0 1771 aa11.9□□□□□ -0.5
GABRA1-219ENST00000638112 ABCC5O15440 1437 aa11.9□□□□□ -0.5
GABRA1-219ENST00000638112 HECW2Q9P2P5 1572 aa11.9□□□□□ -0.5
GABRA1-219ENST00000638112 FAM13BQ9NYF5 915 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms