RNA–Protein interactions for RNA: ENST00000637628.1

CHRNA4-220, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 5

Gene CHRNA4, Length 100 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-220ENST00000637628 TCF3P15923 654 aa4.93□□□□□ -1.62
CHRNA4-220ENST00000637628 PROCA1Q8NCQ7 364 aaPredicted RBP4.93□□□□□ -1.62
CHRNA4-220ENST00000637628 FBXO22Q8NEZ5 403 aa4.93□□□□□ -1.62
CHRNA4-220ENST00000637628 OXER1Q8TDS5 423 aa4.93□□□□□ -1.62
CHRNA4-220ENST00000637628 GDPD2Q9HCC8 539 aa4.93□□□□□ -1.62
CHRNA4-220ENST00000637628 SNRKQ9NRH2 765 aa4.93□□□□□ -1.62
CHRNA4-220ENST00000637628 BCCIPQ9P287 314 aaKnown RBP eCLIP4.93□□□□□ -1.62
CHRNA4-220ENST00000637628 PPP1R1BQ9UD71 204 aaPredicted RBP4.93□□□□□ -1.62
CHRNA4-220ENST00000637628 SPDYE16A6NNV3 312 aaPredicted RBP4.92□□□□□ -1.62
CHRNA4-220ENST00000637628 POM121CA8CG34 1229 aa4.92□□□□□ -1.62
CHRNA4-220ENST00000637628 DPYSL4O14531 572 aa4.92□□□□□ -1.62
CHRNA4-220ENST00000637628 ABL2P42684 1182 aa4.92□□□□□ -1.62
CHRNA4-220ENST00000637628 NOL8Q76FK4 1167 aaKnown RBP4.92□□□□□ -1.62
CHRNA4-220ENST00000637628 TICAM2Q86XR7 235 aa4.92□□□□□ -1.62
CHRNA4-220ENST00000637628 VRTNQ9H8Y1 702 aa4.92□□□□□ -1.62
CHRNA4-220ENST00000637628 PHF8Q9UPP1 1060 aa4.92□□□□□ -1.62
CHRNA4-220ENST00000637628 CLSTN1O94985 981 aa4.91□□□□□ -1.62
CHRNA4-220ENST00000637628 PSEN1P49768 467 aa4.91□□□□□ -1.62
CHRNA4-220ENST00000637628 HIC1Q14526 733 aa4.91□□□□□ -1.62
CHRNA4-220ENST00000637628 CC2D2BQ6DHV5 1058 aa4.91□□□□□ -1.62
CHRNA4-220ENST00000637628 BANK1Q8NDB2 785 aa4.91□□□□□ -1.62
CHRNA4-220ENST00000637628 ZNF526Q8TF50 670 aaPredicted RBP4.91□□□□□ -1.62
CHRNA4-220ENST00000637628 C8orf37Q96NL8 207 aa4.91□□□□□ -1.62
CHRNA4-220ENST00000637628 POLR3EQ9NVU0 708 aa4.91□□□□□ -1.62
CHRNA4-220ENST00000637628 GTF3C5Q9Y5Q8 519 aaPredicted RBP4.91□□□□□ -1.62
CHRNA4-220ENST00000637628 SOX12O15370 315 aa4.9□□□□□ -1.63
CHRNA4-220ENST00000637628 FECHP22830 423 aa4.9□□□□□ -1.63
CHRNA4-220ENST00000637628 PDIA6Q15084 440 aa4.9□□□□□ -1.63
CHRNA4-220ENST00000637628 EFCAB3Q8N7B9 438 aa4.9□□□□□ -1.63
CHRNA4-220ENST00000637628 UBXN4Q92575 508 aa4.9□□□□□ -1.63
CHRNA4-220ENST00000637628 PRM3Q9NNZ6 103 aa4.9□□□□□ -1.63
CHRNA4-220ENST00000637628 BRPF3Q9ULD4 1205 aa4.9□□□□□ -1.63
CHRNA4-220ENST00000637628 PCDHB8Q9UN66 801 aa4.9□□□□□ -1.63
CHRNA4-220ENST00000637628 PCDHB13Q9Y5F0 798 aa4.9□□□□□ -1.63
CHRNA4-220ENST00000637628 CADPSQ9ULU8 1353 aa4.9□□□□□ -1.63
CHRNA4-220ENST00000637628 GRXCR2A6NFK2 248 aa4.89□□□□□ -1.63
CHRNA4-220ENST00000637628 FCHSD2O94868 740 aa4.89□□□□□ -1.63
CHRNA4-220ENST00000637628 ERCC3P19447 782 aa4.89□□□□□ -1.63
CHRNA4-220ENST00000637628 TXNDC2Q86VQ3 553 aa4.89□□□□□ -1.63
CHRNA4-220ENST00000637628 HIRIP3Q9BW71 556 aaPredicted RBP4.89□□□□□ -1.63
CHRNA4-220ENST00000637628 REPIN1Q9BWE0 567 aaKnown RBP4.89□□□□□ -1.63
CHRNA4-220ENST00000637628 CREBZFQ9NS37 354 aa4.89□□□□□ -1.63
CHRNA4-220ENST00000637628 ZNF16P17020 682 aaPredicted RBP4.88□□□□□ -1.63
CHRNA4-220ENST00000637628 RFC5P40937 340 aa4.88□□□□□ -1.63
CHRNA4-220ENST00000637628 MNX1P50219 401 aaPredicted RBP4.88□□□□□ -1.63
CHRNA4-220ENST00000637628 ZC3H6P61129 1189 aaKnown RBP4.88□□□□□ -1.63
CHRNA4-220ENST00000637628 SF3A1Q15459 793 aaKnown RBP4.88□□□□□ -1.63
CHRNA4-220ENST00000637628 PPP1R15BQ5SWA1 713 aa4.88□□□□□ -1.63
CHRNA4-220ENST00000637628 B4GALNT3Q6L9W6 998 aa4.88□□□□□ -1.63
CHRNA4-220ENST00000637628 BCL2L13Q9BXK5 485 aa4.88□□□□□ -1.63
CHRNA4-220ENST00000637628 CABP2Q9NPB3 220 aa4.88□□□□□ -1.63
CHRNA4-220ENST00000637628 GNEQ9Y223 722 aaKnown RBP4.88□□□□□ -1.63
CHRNA4-220ENST00000637628 MARCH6O60337 910 aa4.87□□□□□ -1.63
CHRNA4-220ENST00000637628 CLCN1P35523 988 aa4.87□□□□□ -1.63
CHRNA4-220ENST00000637628 CFAP70Q5T0N1 1121 aa4.87□□□□□ -1.63
CHRNA4-220ENST00000637628 GIPC2Q8TF65 315 aa4.87□□□□□ -1.63
CHRNA4-220ENST00000637628 GNL3Q9BVP2 549 aaKnown RBP eCLIP4.87□□□□□ -1.63
CHRNA4-220ENST00000637628 CLK2P49760 499 aaKnown RBP4.86□□□□□ -1.63
CHRNA4-220ENST00000637628 TMEM259Q4ZIN3 620 aa4.86□□□□□ -1.63
CHRNA4-220ENST00000637628 HDGFL1Q5TGJ6 251 aa4.86□□□□□ -1.63
CHRNA4-220ENST00000637628 CCER1Q8TC90 406 aaPredicted RBP4.86□□□□□ -1.63
CHRNA4-220ENST00000637628 SIRT1Q96EB6 747 aa4.86□□□□□ -1.63
CHRNA4-220ENST00000637628 BEGAINQ9BUH8 593 aa4.86□□□□□ -1.63
CHRNA4-220ENST00000637628 TMEM88BA6NKF7 163 aa4.85□□□□□ -1.63
CHRNA4-220ENST00000637628 NEFLP07196 543 aa4.85□□□□□ -1.63
CHRNA4-220ENST00000637628 SSTR3P32745 418 aaPredicted RBP4.85□□□□□ -1.63
CHRNA4-220ENST00000637628 NAALADL2Q58DX5 795 aa4.85□□□□□ -1.63
CHRNA4-220ENST00000637628 TMED8Q6PL24 325 aaPredicted RBP4.85□□□□□ -1.63
CHRNA4-220ENST00000637628 MTMR14Q8NCE2 650 aa4.85□□□□□ -1.63
CHRNA4-220ENST00000637628 GPCPD1Q9NPB8 672 aa4.85□□□□□ -1.63
CHRNA4-220ENST00000637628 EMILIN3Q9NT22 766 aa4.85□□□□□ -1.63
CHRNA4-220ENST00000637628 TBC1D2BQ9UPU7 963 aa4.85□□□□□ -1.63
CHRNA4-220ENST00000637628 ZC3H4Q9UPT8 1303 aaKnown RBP4.85□□□□□ -1.63
CHRNA4-220ENST00000637628 SRPK2P78362 688 aaKnown RBP4.84□□□□□ -1.63
CHRNA4-220ENST00000637628 MDM2Q00987 491 aaPredicted RBP4.84□□□□□ -1.63
CHRNA4-220ENST00000637628 MYSM1Q5VVJ2 828 aa4.84□□□□□ -1.63
CHRNA4-220ENST00000637628 DNAJC14Q6Y2X3 702 aaPredicted RBP4.84□□□□□ -1.63
CHRNA4-220ENST00000637628 PPP1R12CQ9BZL4 782 aa4.84□□□□□ -1.63
CHRNA4-220ENST00000637628 PLEKHD1A6NEE1 506 aa4.83□□□□□ -1.64
CHRNA4-220ENST00000637628 PRR29P0C7W0 189 aa4.83□□□□□ -1.64
CHRNA4-220ENST00000637628 LMOD1P29536 600 aaPredicted RBP4.83□□□□□ -1.64
CHRNA4-220ENST00000637628 CDCA8Q53HL2 280 aa4.83□□□□□ -1.64
CHRNA4-220ENST00000637628 PRDM16Q9HAZ2 1276 aa4.83□□□□□ -1.64
CHRNA4-220ENST00000637628 ATG7O95352 703 aa4.82□□□□□ -1.64
CHRNA4-220ENST00000637628 ZNF326Q5BKZ1 582 aaKnown RBP4.82□□□□□ -1.64
CHRNA4-220ENST00000637628 GIMAP6Q6P9H5 292 aa4.82□□□□□ -1.64
CHRNA4-220ENST00000637628 ZNF579Q8NAF0 562 aaKnown RBP4.82□□□□□ -1.64
CHRNA4-220ENST00000637628 MICAL1Q8TDZ2 1067 aa4.82□□□□□ -1.64
CHRNA4-220ENST00000637628 TMUB1Q9BVT8 246 aa4.82□□□□□ -1.64
CHRNA4-220ENST00000637628 TSPYL2Q9H2G4 693 aaPredicted RBP4.82□□□□□ -1.64
CHRNA4-220ENST00000637628 IRX6P78412 446 aaPredicted RBP4.81□□□□□ -1.64
CHRNA4-220ENST00000637628 ADAMTS19Q8TE59 1207 aa4.81□□□□□ -1.64
CHRNA4-220ENST00000637628 MYH16Q9H6N6 1097 aa4.81□□□□□ -1.64
CHRNA4-220ENST00000637628 RIPOR2Q9Y4F9 1068 aa4.81□□□□□ -1.64
CHRNA4-220ENST00000637628 LOC102724159A0A0B4J2E5 919 aa4.8□□□□□ -1.64
CHRNA4-220ENST00000637628 PALM3A6NDB9 673 aaPredicted RBP4.8□□□□□ -1.64
CHRNA4-220ENST00000637628 OSBPP22059 807 aa4.8□□□□□ -1.64
CHRNA4-220ENST00000637628 PWP2Q15269 919 aaKnown RBP4.8□□□□□ -1.64
CHRNA4-220ENST00000637628 DPH6Q7L8W6 267 aa4.8□□□□□ -1.64
CHRNA4-220ENST00000637628 SPDYE1Q8NFV5 336 aaPredicted RBP4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms