RNA–Protein interactions for RNA: ENST00000637625.1

CACNA1A-244, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

Gene CACNA1A, Length 1,890 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-244ENST00000637625 GPR37O15354 613 aa19.58■□□□□ 0.73
CACNA1A-244ENST00000637625 ILDR1Q86SU0 546 aaPredicted RBP19.58■□□□□ 0.73
CACNA1A-244ENST00000637625 PDE4DQ08499 809 aa19.58■□□□□ 0.72
CACNA1A-244ENST00000637625 CD44P16070 742 aaKnown RBP19.57■□□□□ 0.72
CACNA1A-244ENST00000637625 MS4A3Q96HJ5 214 aa19.54■□□□□ 0.72
CACNA1A-244ENST00000637625 PDIA6Q15084 440 aa19.54■□□□□ 0.72
CACNA1A-244ENST00000637625 SNAPC4Q5SXM2 1469 aa19.53■□□□□ 0.72
CACNA1A-244ENST00000637625 DSG2Q14126 1118 aa19.53■□□□□ 0.72
CACNA1A-244ENST00000637625 FHAD1B1AJZ9 1412 aa19.52■□□□□ 0.72
CACNA1A-244ENST00000637625 MKRN3Q13064 507 aaKnown RBP19.52■□□□□ 0.72
CACNA1A-244ENST00000637625 CHRDL2Q6WN34 429 aa19.5■□□□□ 0.71
CACNA1A-244ENST00000637625 FAM117AQ9C073 453 aa19.47■□□□□ 0.71
CACNA1A-244ENST00000637625 DPY19L2Q6NUT2 758 aa19.45■□□□□ 0.7
CACNA1A-244ENST00000637625 ZMYND15Q9H091 742 aa19.45■□□□□ 0.7
CACNA1A-244ENST00000637625 FHOD3Q2V2M9 1422 aa19.43■□□□□ 0.7
CACNA1A-244ENST00000637625 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.43■□□□□ 0.7
CACNA1A-244ENST00000637625 EFCAB5A4FU69 1503 aa19.42■□□□□ 0.7
CACNA1A-244ENST00000637625 TTLL13PA6NNM8 815 aa19.41■□□□□ 0.7
CACNA1A-244ENST00000637625 SPDYE16A6NNV3 312 aaPredicted RBP19.4■□□□□ 0.7
CACNA1A-244ENST00000637625 MAGI1Q96QZ7 1491 aaPredicted RBP19.39■□□□□ 0.69
CACNA1A-244ENST00000637625 IQGAP2Q13576 1575 aa19.38■□□□□ 0.69
CACNA1A-244ENST00000637625 GRIN2AQ12879 1464 aa19.38■□□□□ 0.69
CACNA1A-244ENST00000637625 PCF11O94913 1555 aaKnown RBP19.38■□□□□ 0.69
CACNA1A-244ENST00000637625 PLEKHG3A1L390 1219 aa19.37■□□□□ 0.69
CACNA1A-244ENST00000637625 SAMD9Q5K651 1589 aa19.37■□□□□ 0.69
CACNA1A-244ENST00000637625 FOXK1P85037 733 aa19.35■□□□□ 0.69
CACNA1A-244ENST00000637625 MICALL2Q8IY33 904 aa19.35■□□□□ 0.69
CACNA1A-244ENST00000637625 SYNJ2O15056 1496 aa19.34■□□□□ 0.69
CACNA1A-244ENST00000637625 C1orf115Q9H7X2 142 aa19.33■□□□□ 0.68
CACNA1A-244ENST00000637625 RSPH6AQ9H0K4 717 aa19.32■□□□□ 0.68
CACNA1A-244ENST00000637625 CHMP7Q8WUX9 453 aaPredicted RBP19.31■□□□□ 0.68
CACNA1A-244ENST00000637625 CCDC102AQ96A19 550 aa19.31■□□□□ 0.68
CACNA1A-244ENST00000637625 BMP2KQ9NSY1 1161 aaPredicted RBP19.31■□□□□ 0.68
CACNA1A-244ENST00000637625 CEP170Q5SW79 1584 aa19.31■□□□□ 0.68
CACNA1A-244ENST00000637625 TIE1P35590 1138 aa19.31■□□□□ 0.68
CACNA1A-244ENST00000637625 ZNF316A6NFI3 1004 aaPredicted RBP19.28■□□□□ 0.68
CACNA1A-244ENST00000637625 ATP1B4Q9UN42 357 aaPredicted RBP19.28■□□□□ 0.68
CACNA1A-244ENST00000637625 KANK4Q5T7N3 995 aaPredicted RBP19.28■□□□□ 0.68
CACNA1A-244ENST00000637625 TIAM1Q13009 1591 aa19.27■□□□□ 0.67
CACNA1A-244ENST00000637625 GRXCR2A6NFK2 248 aa19.26■□□□□ 0.67
CACNA1A-244ENST00000637625 PARP9Q8IXQ6 854 aa19.26■□□□□ 0.67
CACNA1A-244ENST00000637625 FECHP22830 423 aa19.26■□□□□ 0.67
CACNA1A-244ENST00000637625 PDCD7Q8N8D1 485 aaKnown RBP19.26■□□□□ 0.67
CACNA1A-244ENST00000637625 TRIM35Q9UPQ4 493 aa19.26■□□□□ 0.67
CACNA1A-244ENST00000637625 MINK1Q8N4C8 1332 aaPredicted RBP19.26■□□□□ 0.67
CACNA1A-244ENST00000637625 KIAA0586Q9BVV6 1533 aa19.25■□□□□ 0.67
CACNA1A-244ENST00000637625 CFAP43Q8NDM7 1665 aa19.25■□□□□ 0.67
CACNA1A-244ENST00000637625 MAP2K5Q13163 448 aa19.24■□□□□ 0.67
CACNA1A-244ENST00000637625 PLPP6Q8IY26 295 aa19.24■□□□□ 0.67
CACNA1A-244ENST00000637625 CHD1O14646 1710 aa19.24■□□□□ 0.67
CACNA1A-244ENST00000637625 IRF6O14896 467 aa19.24■□□□□ 0.67
CACNA1A-244ENST00000637625 FYCO1Q9BQS8 1478 aa19.23■□□□□ 0.67
CACNA1A-244ENST00000637625 UGGT2Q9NYU1 1516 aa19.23■□□□□ 0.67
CACNA1A-244ENST00000637625 FMN1Q68DA7 1419 aa19.23■□□□□ 0.67
CACNA1A-244ENST00000637625 AMHR2Q16671 573 aa19.22■□□□□ 0.67
CACNA1A-244ENST00000637625 TMC2Q8TDI7 906 aa19.22■□□□□ 0.67
CACNA1A-244ENST00000637625 NUTM2FA1L443 756 aa19.22■□□□□ 0.67
CACNA1A-244ENST00000637625 KIF3CO14782 793 aa19.22■□□□□ 0.67
CACNA1A-244ENST00000637625 OSBPP22059 807 aa19.22■□□□□ 0.67
CACNA1A-244ENST00000637625 C2orf72A6NCS6 295 aa19.21■□□□□ 0.67
CACNA1A-244ENST00000637625 CASKIN1Q8WXD9 1431 aa19.21■□□□□ 0.67
CACNA1A-244ENST00000637625 KIAA0556O60303 1618 aa19.2■□□□□ 0.66
CACNA1A-244ENST00000637625 LRRIQ1Q96JM4 1722 aa19.2■□□□□ 0.66
CACNA1A-244ENST00000637625 NUP160Q12769 1436 aa19.19■□□□□ 0.66
CACNA1A-244ENST00000637625 PODXL2Q9NZ53 605 aa19.18■□□□□ 0.66
CACNA1A-244ENST00000637625 DISP1Q96F81 1524 aa19.17■□□□□ 0.66
CACNA1A-244ENST00000637625 C19orf67A6NJJ6 358 aa19.16■□□□□ 0.66
CACNA1A-244ENST00000637625 PRIM1P49642 420 aaKnown RBP19.16■□□□□ 0.66
CACNA1A-244ENST00000637625 MAP3K1Q13233 1512 aa19.15■□□□□ 0.66
CACNA1A-244ENST00000637625 DDRGK1Q96HY6 314 aa19.15■□□□□ 0.66
CACNA1A-244ENST00000637625 TMEM121BQ9BXQ6 578 aaPredicted RBP19.15■□□□□ 0.66
CACNA1A-244ENST00000637625 LRRC9Q6ZRR7 1453 aa19.14■□□□□ 0.66
CACNA1A-244ENST00000637625 GNPATO15228 680 aa19.14■□□□□ 0.65
CACNA1A-244ENST00000637625 HRCP23327 699 aa19.14■□□□□ 0.65
CACNA1A-244ENST00000637625 ARID3AQ99856 593 aa19.14■□□□□ 0.65
CACNA1A-244ENST00000637625 ARID3CA6NKF2 412 aa19.12■□□□□ 0.65
CACNA1A-244ENST00000637625 GALR2O43603 387 aaPredicted RBP19.11■□□□□ 0.65
CACNA1A-244ENST00000637625 MAP3K9P80192 1104 aa19.11■□□□□ 0.65
CACNA1A-244ENST00000637625 HECW1Q76N89 1606 aa19.1■□□□□ 0.65
CACNA1A-244ENST00000637625 ONECUT3O60422 494 aaPredicted RBP19.09■□□□□ 0.65
CACNA1A-244ENST00000637625 UPF1Q92900 1129 aaKnown RBP eCLIP19.09■□□□□ 0.65
CACNA1A-244ENST00000637625 DDX12PQ92771 950 aa19.08■□□□□ 0.65
CACNA1A-244ENST00000637625 HIC1Q14526 733 aa19.06■□□□□ 0.64
CACNA1A-244ENST00000637625 JPH4Q96JJ6 628 aa19.05■□□□□ 0.64
CACNA1A-244ENST00000637625 IRX5P78411 483 aaPredicted RBP19.04■□□□□ 0.64
CACNA1A-244ENST00000637625 REPIN1Q9BWE0 567 aaKnown RBP19.04■□□□□ 0.64
CACNA1A-244ENST00000637625 CDK13Q14004 1512 aaKnown RBP19.04■□□□□ 0.64
CACNA1A-244ENST00000637625 TMEM92Q6UXU6 159 aa19.03■□□□□ 0.64
CACNA1A-244ENST00000637625 BOLA1Q9Y3E2 137 aa19.03■□□□□ 0.64
CACNA1A-244ENST00000637625 MS4A1P11836 297 aa19.03■□□□□ 0.64
CACNA1A-244ENST00000637625 PTGER2P43116 358 aa19.03■□□□□ 0.64
CACNA1A-244ENST00000637625 RAPGEF6Q8TEU7 1601 aa19.02■□□□□ 0.64
CACNA1A-244ENST00000637625 OXER1Q8TDS5 423 aa19.02■□□□□ 0.64
CACNA1A-244ENST00000637625 CARMIL2Q6F5E8 1435 aa19.01■□□□□ 0.63
CACNA1A-244ENST00000637625 FCHSD2O94868 740 aa19.01■□□□□ 0.63
CACNA1A-244ENST00000637625 PHLDB1Q86UU1 1377 aa19.01■□□□□ 0.63
CACNA1A-244ENST00000637625 RRBP1Q9P2E9 1410 aaKnown RBP19.01■□□□□ 0.63
CACNA1A-244ENST00000637625 MTUS2Q5JR59 1369 aa19■□□□□ 0.63
CACNA1A-244ENST00000637625 CCDC18Q5T9S5 1454 aa19■□□□□ 0.63
CACNA1A-244ENST00000637625 EPRSP07814 1512 aaKnown RBP19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms