RNA–Protein interactions for RNA: ENST00000637367.1

SCN2A-216, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

TSL 5

Gene SCN2A, Length 4,408 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-216ENST00000637367 VSIG10Q8N0Z9 540 aa8.15□□□□□ -1.1
SCN2A-216ENST00000637367 NUTM2FA1L443 756 aa8.15□□□□□ -1.1
SCN2A-216ENST00000637367 HAP1P54257 671 aaPredicted RBP8.15□□□□□ -1.1
SCN2A-216ENST00000637367 TRIM6-TRIM34B2RNG4 842 aa8.15□□□□□ -1.11
SCN2A-216ENST00000637367 KANK1Q14678 1352 aa8.14□□□□□ -1.11
SCN2A-216ENST00000637367 ZNF644Q9H582 1327 aaPredicted RBP8.14□□□□□ -1.11
SCN2A-216ENST00000637367 KIAA2012Q0VF49 1180 aa8.14□□□□□ -1.11
SCN2A-216ENST00000637367 NFKBIBQ15653 356 aa8.14□□□□□ -1.11
SCN2A-216ENST00000637367 RTF1Q92541 710 aaKnown RBP8.14□□□□□ -1.11
SCN2A-216ENST00000637367 BRPF3Q9ULD4 1205 aa8.14□□□□□ -1.11
SCN2A-216ENST00000637367 TOP2AP11388 1531 aaKnown RBP8.14□□□□□ -1.11
SCN2A-216ENST00000637367 HSP90AA2PQ14568 343 aaPredicted RBP8.14□□□□□ -1.11
SCN2A-216ENST00000637367 ANO8Q9HCE9 1232 aaPredicted RBP8.14□□□□□ -1.11
SCN2A-216ENST00000637367 PHLDB1Q86UU1 1377 aa8.14□□□□□ -1.11
SCN2A-216ENST00000637367 DDX49Q9Y6V7 483 aaKnown RBP8.14□□□□□ -1.11
SCN2A-216ENST00000637367 KIAA1211Q6ZU35 1233 aa8.13□□□□□ -1.11
SCN2A-216ENST00000637367 HDGFL2Q7Z4V5 671 aaPredicted RBP8.13□□□□□ -1.11
SCN2A-216ENST00000637367 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.13□□□□□ -1.11
SCN2A-216ENST00000637367 CCDC7Q96M83 1385 aa8.13□□□□□ -1.11
SCN2A-216ENST00000637367 ANKRD45Q5TZF3 282 aa8.13□□□□□ -1.11
SCN2A-216ENST00000637367 NRDCO43847 1150 aa8.11□□□□□ -1.11
SCN2A-216ENST00000637367 ERCC6Q03468 1493 aa8.11□□□□□ -1.11
SCN2A-216ENST00000637367 PANK1Q8TE04 598 aa8.11□□□□□ -1.11
SCN2A-216ENST00000637367 AKNAQ7Z591 1439 aa8.11□□□□□ -1.11
SCN2A-216ENST00000637367 EFCAB2Q5VUJ9 269 aa8.11□□□□□ -1.11
SCN2A-216ENST00000637367 GOLGA6L6A8MZA4 724 aa8.1□□□□□ -1.11
SCN2A-216ENST00000637367 FRAT2O75474 233 aaPredicted RBP8.1□□□□□ -1.11
SCN2A-216ENST00000637367 SKAP1Q86WV1 359 aa8.1□□□□□ -1.11
SCN2A-216ENST00000637367 ZNF330Q9Y3S2 320 aaPredicted RBP8.1□□□□□ -1.11
SCN2A-216ENST00000637367 E9PSI1 815 aa8.09□□□□□ -1.11
SCN2A-216ENST00000637367 MSH5O43196 834 aa8.09□□□□□ -1.11
SCN2A-216ENST00000637367 CGNL1Q0VF96 1302 aa8.09□□□□□ -1.11
SCN2A-216ENST00000637367 ZKSCAN2Q63HK3 967 aa8.09□□□□□ -1.11
SCN2A-216ENST00000637367 LTV1Q96GA3 475 aaPredicted RBP8.09□□□□□ -1.11
SCN2A-216ENST00000637367 LNPKQ9C0E8 428 aa8.09□□□□□ -1.11
SCN2A-216ENST00000637367 RSPH6AQ9H0K4 717 aa8.09□□□□□ -1.11
SCN2A-216ENST00000637367 CCDC144AA2RUR9 1427 aa8.09□□□□□ -1.11
SCN2A-216ENST00000637367 ADAMTS8Q9UP79 889 aa8.09□□□□□ -1.12
SCN2A-216ENST00000637367 STK31Q9BXU1 1019 aa8.08□□□□□ -1.12
SCN2A-216ENST00000637367 DDX11L8A8MPP1 907 aa8.08□□□□□ -1.12
SCN2A-216ENST00000637367 RILPL2Q969X0 211 aa8.08□□□□□ -1.12
SCN2A-216ENST00000637367 CNTLNQ9NXG0 1405 aa8.08□□□□□ -1.12
SCN2A-216ENST00000637367 SYAP1Q96A49 352 aaPredicted RBP8.08□□□□□ -1.12
SCN2A-216ENST00000637367 KIF21BO75037 1637 aa8.07□□□□□ -1.12
SCN2A-216ENST00000637367 SPAG9O60271 1321 aaKnown RBP8.07□□□□□ -1.12
SCN2A-216ENST00000637367 ST18O60284 1047 aa8.07□□□□□ -1.12
SCN2A-216ENST00000637367 NBPF8Q3BBV2 869 aa8.07□□□□□ -1.12
SCN2A-216ENST00000637367 TERF2IPQ9NYB0 399 aa8.07□□□□□ -1.12
SCN2A-216ENST00000637367 FAM13BQ9NYF5 915 aa8.07□□□□□ -1.12
SCN2A-216ENST00000637367 JPH4Q96JJ6 628 aa8.06□□□□□ -1.12
SCN2A-216ENST00000637367 PHF23Q9BUL5 403 aaPredicted RBP8.06□□□□□ -1.12
SCN2A-216ENST00000637367 CHMP3Q9Y3E7 222 aa8.06□□□□□ -1.12
SCN2A-216ENST00000637367 CCDC9Q9Y3X0 531 aaKnown RBP8.06□□□□□ -1.12
SCN2A-216ENST00000637367 CARMIL2Q6F5E8 1435 aa8.06□□□□□ -1.12
SCN2A-216ENST00000637367 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.06□□□□□ -1.12
SCN2A-216ENST00000637367 PTMSP20962 102 aa8.06□□□□□ -1.12
SCN2A-216ENST00000637367 CFAP44Q96MT7 982 aa8.06□□□□□ -1.12
SCN2A-216ENST00000637367 HMMRO75330 724 aa8.06□□□□□ -1.12
SCN2A-216ENST00000637367 GNL2Q13823 731 aaKnown RBP8.06□□□□□ -1.12
SCN2A-216ENST00000637367 FGD6Q6ZV73 1430 aa8.06□□□□□ -1.12
SCN2A-216ENST00000637367 IGF1RP08069 1367 aa8.06□□□□□ -1.12
SCN2A-216ENST00000637367 EIF3AQ14152 1382 aaKnown RBP8.06□□□□□ -1.12
SCN2A-216ENST00000637367 CADPSQ9ULU8 1353 aa8.05□□□□□ -1.12
SCN2A-216ENST00000637367 SMARCA2P51531 1590 aa8.05□□□□□ -1.12
SCN2A-216ENST00000637367 DZIP1LQ8IYY4 767 aaKnown RBP8.05□□□□□ -1.12
SCN2A-216ENST00000637367 NECTIN2Q92692 538 aa8.05□□□□□ -1.12
SCN2A-216ENST00000637367 CHMP5Q9NZZ3 219 aa8.05□□□□□ -1.12
SCN2A-216ENST00000637367 BCL11BQ9C0K0 894 aaPredicted RBP8.05□□□□□ -1.12
SCN2A-216ENST00000637367 ATAD2BQ9ULI0 1458 aa8.05□□□□□ -1.12
SCN2A-216ENST00000637367 MINK1Q8N4C8 1332 aaPredicted RBP8.05□□□□□ -1.12
SCN2A-216ENST00000637367 ARAP1Q96P48 1450 aa8.04□□□□□ -1.12
SCN2A-216ENST00000637367 HSP90B1P14625 803 aaKnown RBP8.04□□□□□ -1.12
SCN2A-216ENST00000637367 UACAQ9BZF9 1416 aa8.04□□□□□ -1.12
SCN2A-216ENST00000637367 WASHC2CQ9Y4E1 1318 aa8.04□□□□□ -1.12
SCN2A-216ENST00000637367 C22orf23Q9BZE7 217 aa8.04□□□□□ -1.12
SCN2A-216ENST00000637367 NBPF1Q3BBV0 1214 aa8.04□□□□□ -1.12
SCN2A-216ENST00000637367 NPHP1O15259 732 aa8.03□□□□□ -1.12
SCN2A-216ENST00000637367 BCAR3O75815 825 aa8.03□□□□□ -1.12
SCN2A-216ENST00000637367 RIPK4P57078 832 aa8.03□□□□□ -1.12
SCN2A-216ENST00000637367 RNF214Q8ND24 703 aa8.03□□□□□ -1.12
SCN2A-216ENST00000637367 BACH2Q9BYV9 841 aa8.03□□□□□ -1.12
SCN2A-216ENST00000637367 PNISRQ8TF01 805 aaKnown RBP8.02□□□□□ -1.13
SCN2A-216ENST00000637367 LRRC9Q6ZRR7 1453 aa8.02□□□□□ -1.13
SCN2A-216ENST00000637367 DDX19BQ9UMR2 479 aa8.02□□□□□ -1.13
SCN2A-216ENST00000637367 HMOX1P09601 288 aa8.01□□□□□ -1.13
SCN2A-216ENST00000637367 AMPHP49418 695 aa8.01□□□□□ -1.13
SCN2A-216ENST00000637367 MCTP1Q6DN14 999 aa8.01□□□□□ -1.13
SCN2A-216ENST00000637367 CREBRFQ8IUR6 639 aa8.01□□□□□ -1.13
SCN2A-216ENST00000637367 GGNBP2Q9H3C7 697 aa8.01□□□□□ -1.13
SCN2A-216ENST00000637367 ISY1Q9ULR0 285 aaKnown RBP8.01□□□□□ -1.13
SCN2A-216ENST00000637367 KIF16BQ96L93 1317 aa8.01□□□□□ -1.13
SCN2A-216ENST00000637367 FAM43AQ8N2R8 423 aa8.01□□□□□ -1.13
SCN2A-216ENST00000637367 WDR97A6NE52 1622 aa8.01□□□□□ -1.13
SCN2A-216ENST00000637367 SMARCA4P51532 1647 aa8.01□□□□□ -1.13
SCN2A-216ENST00000637367 MPNDQ8N594 471 aa8.01□□□□□ -1.13
SCN2A-216ENST00000637367 NGDNQ8NEJ9 315 aaKnown RBP8.01□□□□□ -1.13
SCN2A-216ENST00000637367 ANO2Q9NQ90 1003 aa8.01□□□□□ -1.13
SCN2A-216ENST00000637367 MYOM3Q5VTT5 1437 aa8□□□□□ -1.13
SCN2A-216ENST00000637367 TRAK2O60296 914 aa8□□□□□ -1.13
SCN2A-216ENST00000637367 CSB-PGBD3P0DP91 1061 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms