RNA–Protein interactions for RNA: ENST00000637350.1

CHRNA7-227, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 2,241 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-227ENST00000637350 MAGI2Q86UL8 1455 aa23.91■■□□□ 1.42
CHRNA7-227ENST00000637350 IQGAP3Q86VI3 1631 aa23.9■■□□□ 1.42
CHRNA7-227ENST00000637350 MYT1LQ9UL68 1186 aa23.9■■□□□ 1.42
CHRNA7-227ENST00000637350 POGZQ7Z3K3 1410 aa23.89■■□□□ 1.42
CHRNA7-227ENST00000637350 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.89■■□□□ 1.41
CHRNA7-227ENST00000637350 WASHC2AQ641Q2 1341 aa23.88■■□□□ 1.41
CHRNA7-227ENST00000637350 POLR1AO95602 1720 aaPredicted RBP23.88■■□□□ 1.41
CHRNA7-227ENST00000637350 NBPF8Q3BBV2 869 aa23.87■■□□□ 1.41
CHRNA7-227ENST00000637350 KDM5CP41229 1560 aa23.87■■□□□ 1.41
CHRNA7-227ENST00000637350 KIDINS220Q9ULH0 1771 aa23.87■■□□□ 1.41
CHRNA7-227ENST00000637350 ANP32CO43423 234 aa23.86■■□□□ 1.41
CHRNA7-227ENST00000637350 DIP2BQ9P265 1576 aa23.86■■□□□ 1.41
CHRNA7-227ENST00000637350 FAM69CQ0P6D2 419 aa23.84■■□□□ 1.41
CHRNA7-227ENST00000637350 DHX29Q7Z478 1369 aaKnown RBP23.84■■□□□ 1.41
CHRNA7-227ENST00000637350 CCER2I3L3R5 266 aa23.83■■□□□ 1.41
CHRNA7-227ENST00000637350 MLH3Q9UHC1 1453 aa23.82■■□□□ 1.4
CHRNA7-227ENST00000637350 EIF4G2P78344 907 aaKnown RBP eCLIP23.82■■□□□ 1.4
CHRNA7-227ENST00000637350 DEPDC5O75140 1603 aa23.81■■□□□ 1.4
CHRNA7-227ENST00000637350 EIF2AK4Q9P2K8 1649 aaKnown RBP23.81■■□□□ 1.4
CHRNA7-227ENST00000637350 HECW2Q9P2P5 1572 aa23.8■■□□□ 1.4
CHRNA7-227ENST00000637350 PELP1Q8IZL8 1130 aaKnown RBP23.78■■□□□ 1.4
CHRNA7-227ENST00000637350 C11orf95C9JLR9 678 aaPredicted RBP23.77■■□□□ 1.4
CHRNA7-227ENST00000637350 SUPT16HQ9Y5B9 1047 aaKnown RBP23.77■■□□□ 1.4
CHRNA7-227ENST00000637350 KIF3BO15066 747 aa23.76■■□□□ 1.39
CHRNA7-227ENST00000637350 SPATA31E1Q6ZUB1 1445 aa23.75■■□□□ 1.39
CHRNA7-227ENST00000637350 RAPGEF3O95398 923 aa23.75■■□□□ 1.39
CHRNA7-227ENST00000637350 A2MP01023 1474 aa23.75■■□□□ 1.39
CHRNA7-227ENST00000637350 RICTORQ6R327 1708 aa23.74■■□□□ 1.39
CHRNA7-227ENST00000637350 CNTLNQ9NXG0 1405 aa23.74■■□□□ 1.39
CHRNA7-227ENST00000637350 KANK1Q14678 1352 aa23.73■■□□□ 1.39
CHRNA7-227ENST00000637350 CCDC144AA2RUR9 1427 aa23.72■■□□□ 1.39
CHRNA7-227ENST00000637350 CCDC7Q96M83 1385 aa23.72■■□□□ 1.39
CHRNA7-227ENST00000637350 ATP10AO60312 1499 aa23.72■■□□□ 1.39
CHRNA7-227ENST00000637350 PLA2R1Q13018 1463 aa23.72■■□□□ 1.39
CHRNA7-227ENST00000637350 PRDM15P57071 1507 aaPredicted RBP23.72■■□□□ 1.39
CHRNA7-227ENST00000637350 VWDEQ8N2E2 1590 aa23.71■■□□□ 1.39
CHRNA7-227ENST00000637350 TSPOAP1O95153 1857 aa23.71■■□□□ 1.39
CHRNA7-227ENST00000637350 BCORL1Q5H9F3 1711 aa23.71■■□□□ 1.39
CHRNA7-227ENST00000637350 ABCA6Q8N139 1617 aa23.7■■□□□ 1.38
CHRNA7-227ENST00000637350 MROH1Q8NDA8 1641 aa23.69■■□□□ 1.38
CHRNA7-227ENST00000637350 PPRC1Q5VV67 1664 aaKnown RBP23.69■■□□□ 1.38
CHRNA7-227ENST00000637350 FRMPD1Q5SYB0 1578 aa23.68■■□□□ 1.38
CHRNA7-227ENST00000637350 E9PCH4 1651 aa23.68■■□□□ 1.38
CHRNA7-227ENST00000637350 TET3O43151 1660 aa23.68■■□□□ 1.38
CHRNA7-227ENST00000637350 KIF13AQ9H1H9 1805 aa23.66■■□□□ 1.38
CHRNA7-227ENST00000637350 RNF17Q9BXT8 1623 aaKnown RBP23.66■■□□□ 1.38
CHRNA7-227ENST00000637350 DIP2CQ9Y2E4 1556 aa23.64■■□□□ 1.37
CHRNA7-227ENST00000637350 KIF7Q2M1P5 1343 aa23.62■■□□□ 1.37
CHRNA7-227ENST00000637350 UHRF1BP1Q6BDS2 1440 aa23.61■■□□□ 1.37
CHRNA7-227ENST00000637350 ZMYM4Q5VZL5 1548 aa23.6■■□□□ 1.37
CHRNA7-227ENST00000637350 ZNF326Q5BKZ1 582 aaKnown RBP23.6■■□□□ 1.37
CHRNA7-227ENST00000637350 SPHKAPQ2M3C7 1700 aa23.6■■□□□ 1.37
CHRNA7-227ENST00000637350 PTPRTO14522 1441 aa23.59■■□□□ 1.37
CHRNA7-227ENST00000637350 RALGAPBQ86X10 1494 aa23.59■■□□□ 1.37
CHRNA7-227ENST00000637350 TRPM2O94759 1503 aa23.59■■□□□ 1.37
CHRNA7-227ENST00000637350 LMTK2Q8IWU2 1503 aa23.59■■□□□ 1.37
CHRNA7-227ENST00000637350 USP47Q96K76 1375 aa23.58■■□□□ 1.37
CHRNA7-227ENST00000637350 DCAF11Q8TEB1 546 aa23.57■■□□□ 1.36
CHRNA7-227ENST00000637350 YEATS2Q9ULM3 1422 aa23.57■■□□□ 1.36
CHRNA7-227ENST00000637350 EFCAB6Q5THR3 1501 aa23.57■■□□□ 1.36
CHRNA7-227ENST00000637350 GGT6Q6P531 493 aa23.56■■□□□ 1.36
CHRNA7-227ENST00000637350 CEP152O94986 1710 aa23.55■■□□□ 1.36
CHRNA7-227ENST00000637350 CCDC184Q52MB2 194 aa23.55■■□□□ 1.36
CHRNA7-227ENST00000637350 KDM2AQ9Y2K7 1162 aa23.55■■□□□ 1.36
CHRNA7-227ENST00000637350 RGL3Q3MIN7 710 aa23.54■■□□□ 1.36
CHRNA7-227ENST00000637350 PRKRIP1Q9H875 184 aaPredicted RBP23.51■■□□□ 1.35
CHRNA7-227ENST00000637350 CLTCL1P53675 1640 aa23.5■■□□□ 1.35
CHRNA7-227ENST00000637350 TRPM1Q7Z4N2 1603 aa23.49■■□□□ 1.35
CHRNA7-227ENST00000637350 WASHC2CQ9Y4E1 1318 aa23.49■■□□□ 1.35
CHRNA7-227ENST00000637350 ABCC3O15438 1527 aa23.48■■□□□ 1.35
CHRNA7-227ENST00000637350 PRAG1Q86YV5 1406 aa23.47■■□□□ 1.35
CHRNA7-227ENST00000637350 HNRNPUQ00839 825 aaKnown RBP eCLIP23.46■■□□□ 1.35
CHRNA7-227ENST00000637350 FKBP8Q14318 412 aa23.45■■□□□ 1.34
CHRNA7-227ENST00000637350 NPATQ14207 1427 aa23.44■■□□□ 1.34
CHRNA7-227ENST00000637350 COL17A1Q9UMD9 1497 aaPredicted RBP23.44■■□□□ 1.34
CHRNA7-227ENST00000637350 REREQ9P2R6 1566 aa23.43■■□□□ 1.34
CHRNA7-227ENST00000637350 BCANQ96GW7 911 aa23.43■■□□□ 1.34
CHRNA7-227ENST00000637350 CAMSAP1Q5T5Y3 1602 aa23.42■■□□□ 1.34
CHRNA7-227ENST00000637350 ZC3H13Q5T200 1668 aaKnown RBP23.42■■□□□ 1.34
CHRNA7-227ENST00000637350 NEURL4Q96JN8 1562 aa23.42■■□□□ 1.34
CHRNA7-227ENST00000637350 CARD11Q9BXL7 1154 aa23.41■■□□□ 1.34
CHRNA7-227ENST00000637350 TRHP20396 242 aaPredicted RBP23.4■■□□□ 1.34
CHRNA7-227ENST00000637350 CFAP65Q6ZU64 1925 aaKnown RBP23.39■■□□□ 1.34
CHRNA7-227ENST00000637350 ROCK2O75116 1388 aaKnown RBP23.39■■□□□ 1.33
CHRNA7-227ENST00000637350 UGGT1Q9NYU2 1555 aa23.39■■□□□ 1.33
CHRNA7-227ENST00000637350 KIF1BO60333 1816 aa23.39■■□□□ 1.33
CHRNA7-227ENST00000637350 STAC3Q96MF2 364 aa23.39■■□□□ 1.33
CHRNA7-227ENST00000637350 AGLP35573 1532 aa23.38■■□□□ 1.33
CHRNA7-227ENST00000637350 POLR3GLQ9BT43 218 aa23.37■■□□□ 1.33
CHRNA7-227ENST00000637350 ARHGAP31Q2M1Z3 1444 aa23.36■■□□□ 1.33
CHRNA7-227ENST00000637350 MRS2Q9HD23 443 aa23.36■■□□□ 1.33
CHRNA7-227ENST00000637350 ARHGEF40Q8TER5 1519 aa23.35■■□□□ 1.33
CHRNA7-227ENST00000637350 GPRASP1Q5JY77 1395 aa23.33■■□□□ 1.33
CHRNA7-227ENST00000637350 NOS1P29475 1434 aa23.32■■□□□ 1.32
CHRNA7-227ENST00000637350 ST20-MTHFSA0A0A6YYL1 179 aa23.32■■□□□ 1.32
CHRNA7-227ENST00000637350 FAM9BQ8IZU0 186 aa23.32■■□□□ 1.32
CHRNA7-227ENST00000637350 LAMC1P11047 1609 aa23.32■■□□□ 1.32
CHRNA7-227ENST00000637350 SIGLEC1Q9BZZ2 1709 aa23.32■■□□□ 1.32
CHRNA7-227ENST00000637350 ARID4BQ4LE39 1312 aaPredicted RBP23.31■■□□□ 1.32
CHRNA7-227ENST00000637350 MADDQ8WXG6 1647 aa23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms