RNA–Protein interactions for RNA: ENST00000637278.1

CLN5-217, Transcript of CLN5, intracellular trafficking protein, humanhuman

TSL 2

Gene CLN5, Length 2,863 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-217ENST00000637278 KIF21BO75037 1637 aa10.89□□□□□ -0.67
CLN5-217ENST00000637278 MKRN4PQ13434 485 aaPredicted RBP10.89□□□□□ -0.67
CLN5-217ENST00000637278 EFCAB5A4FU69 1503 aa10.88□□□□□ -0.67
CLN5-217ENST00000637278 RAPGEF6Q8TEU7 1601 aa10.87□□□□□ -0.67
CLN5-217ENST00000637278 PHLDB1Q86UU1 1377 aa10.87□□□□□ -0.67
CLN5-217ENST00000637278 IRF5Q13568 498 aa10.87□□□□□ -0.67
CLN5-217ENST00000637278 HS6ST3Q8IZP7 471 aa10.87□□□□□ -0.67
CLN5-217ENST00000637278 WDR70Q9NW82 654 aa10.87□□□□□ -0.67
CLN5-217ENST00000637278 CIZ1Q9ULV3 898 aaPredicted RBP10.86□□□□□ -0.67
CLN5-217ENST00000637278 ABCA9Q8IUA7 1624 aa10.85□□□□□ -0.67
CLN5-217ENST00000637278 SPOCK2Q92563 424 aa10.85□□□□□ -0.67
CLN5-217ENST00000637278 ZNF592Q92610 1267 aa10.85□□□□□ -0.67
CLN5-217ENST00000637278 CARNS1A5YM72 827 aa10.84□□□□□ -0.67
CLN5-217ENST00000637278 CD109Q6YHK3 1445 aa10.84□□□□□ -0.67
CLN5-217ENST00000637278 ZNF316A6NFI3 1004 aaPredicted RBP10.84□□□□□ -0.67
CLN5-217ENST00000637278 SEMA3EO15041 775 aa10.83□□□□□ -0.68
CLN5-217ENST00000637278 PROM2Q8N271 834 aa10.83□□□□□ -0.68
CLN5-217ENST00000637278 CFAP74Q9C0B2 1584 aa10.83□□□□□ -0.68
CLN5-217ENST00000637278 ARAP3Q8WWN8 1544 aa10.83□□□□□ -0.68
CLN5-217ENST00000637278 HMGB1P09429 215 aaKnown RBP10.83□□□□□ -0.68
CLN5-217ENST00000637278 RETREG2Q8NC44 543 aa10.83□□□□□ -0.68
CLN5-217ENST00000637278 ZNF326Q5BKZ1 582 aaKnown RBP10.82□□□□□ -0.68
CLN5-217ENST00000637278 FAM117AQ9C073 453 aa10.82□□□□□ -0.68
CLN5-217ENST00000637278 ZNF777Q9ULD5 760 aaPredicted RBP10.82□□□□□ -0.68
CLN5-217ENST00000637278 CADPS2Q86UW7 1296 aa10.81□□□□□ -0.68
CLN5-217ENST00000637278 ADGRL1O94910 1474 aa10.81□□□□□ -0.68
CLN5-217ENST00000637278 NEO1Q92859 1461 aa10.81□□□□□ -0.68
CLN5-217ENST00000637278 ATP10BO94823 1461 aa10.8□□□□□ -0.68
CLN5-217ENST00000637278 GLIPR1L2Q4G1C9 344 aa10.79□□□□□ -0.68
CLN5-217ENST00000637278 BCCIPQ9P287 314 aaKnown RBP eCLIP10.79□□□□□ -0.68
CLN5-217ENST00000637278 MYT1LQ9UL68 1186 aa10.79□□□□□ -0.68
CLN5-217ENST00000637278 CERS3Q8IU89 383 aa10.79□□□□□ -0.68
CLN5-217ENST00000637278 KDM4AO75164 1064 aa10.79□□□□□ -0.68
CLN5-217ENST00000637278 COL17A1Q9UMD9 1497 aaPredicted RBP10.78□□□□□ -0.68
CLN5-217ENST00000637278 NUP153P49790 1475 aaKnown RBP10.76□□□□□ -0.69
CLN5-217ENST00000637278 KDM4FA0A1W2PPD8 638 aa10.76□□□□□ -0.69
CLN5-217ENST00000637278 RNF216Q9NWF9 866 aaPredicted RBP10.75□□□□□ -0.69
CLN5-217ENST00000637278 HECW1Q76N89 1606 aa10.75□□□□□ -0.69
CLN5-217ENST00000637278 E9PSI1 815 aa10.74□□□□□ -0.69
CLN5-217ENST00000637278 NAP1L2Q9ULW6 460 aaPredicted RBP10.74□□□□□ -0.69
CLN5-217ENST00000637278 FBXW7Q969H0 707 aa10.73□□□□□ -0.69
CLN5-217ENST00000637278 KDM4CQ9H3R0 1056 aa10.73□□□□□ -0.69
CLN5-217ENST00000637278 FMN1Q68DA7 1419 aa10.73□□□□□ -0.69
CLN5-217ENST00000637278 FHOD3Q2V2M9 1422 aa10.72□□□□□ -0.69
CLN5-217ENST00000637278 PRDM10Q9NQV6 1147 aa10.72□□□□□ -0.69
CLN5-217ENST00000637278 KCNH8Q96L42 1107 aa10.71□□□□□ -0.69
CLN5-217ENST00000637278 ARHGEF40Q8TER5 1519 aa10.7□□□□□ -0.7
CLN5-217ENST00000637278 ZMYM4Q5VZL5 1548 aa10.7□□□□□ -0.7
CLN5-217ENST00000637278 FRMPD1Q5SYB0 1578 aa10.69□□□□□ -0.7
CLN5-217ENST00000637278 POLA2Q14181 598 aa10.69□□□□□ -0.7
CLN5-217ENST00000637278 RICTORQ6R327 1708 aa10.69□□□□□ -0.7
CLN5-217ENST00000637278 PLEKHD1A6NEE1 506 aa10.68□□□□□ -0.7
CLN5-217ENST00000637278 SMARCA5O60264 1052 aaPredicted RBP10.68□□□□□ -0.7
CLN5-217ENST00000637278 P3H3Q8IVL6 736 aa10.68□□□□□ -0.7
CLN5-217ENST00000637278 CHMP4BQ9H444 224 aaKnown RBP10.68□□□□□ -0.7
CLN5-217ENST00000637278 UNCXA6NJT0 531 aa10.68□□□□□ -0.7
CLN5-217ENST00000637278 ADAMTSL3P82987 1691 aa10.68□□□□□ -0.7
CLN5-217ENST00000637278 MAGI2Q86UL8 1455 aa10.68□□□□□ -0.7
CLN5-217ENST00000637278 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.67□□□□□ -0.7
CLN5-217ENST00000637278 ARID4BQ4LE39 1312 aaPredicted RBP10.67□□□□□ -0.7
CLN5-217ENST00000637278 DENND4BO75064 1496 aaPredicted RBP10.67□□□□□ -0.7
CLN5-217ENST00000637278 MYO5CQ9NQX4 1742 aa10.67□□□□□ -0.7
CLN5-217ENST00000637278 BCORL1Q5H9F3 1711 aa10.66□□□□□ -0.7
CLN5-217ENST00000637278 KIF14Q15058 1648 aa10.66□□□□□ -0.7
CLN5-217ENST00000637278 FANCAO15360 1455 aa10.66□□□□□ -0.7
CLN5-217ENST00000637278 TTC37Q6PGP7 1564 aa10.66□□□□□ -0.7
CLN5-217ENST00000637278 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.66□□□□□ -0.7
CLN5-217ENST00000637278 HNRNPUL2Q1KMD3 747 aaKnown RBP10.66□□□□□ -0.7
CLN5-217ENST00000637278 CNPY4Q8N129 248 aa10.66□□□□□ -0.7
CLN5-217ENST00000637278 POM121Q96HA1 1249 aa10.66□□□□□ -0.7
CLN5-217ENST00000637278 HECW2Q9P2P5 1572 aa10.66□□□□□ -0.7
CLN5-217ENST00000637278 CCDC18Q5T9S5 1454 aa10.65□□□□□ -0.71
CLN5-217ENST00000637278 CLIP1P30622 1438 aa10.64□□□□□ -0.71
CLN5-217ENST00000637278 AKNAQ7Z591 1439 aa10.64□□□□□ -0.71
CLN5-217ENST00000637278 POGZQ7Z3K3 1410 aa10.63□□□□□ -0.71
CLN5-217ENST00000637278 ARHGAP35Q9NRY4 1499 aa10.63□□□□□ -0.71
CLN5-217ENST00000637278 ZFYVE16Q7Z3T8 1539 aa10.63□□□□□ -0.71
CLN5-217ENST00000637278 ZMYND10O75800 440 aa10.63□□□□□ -0.71
CLN5-217ENST00000637278 PRDM16Q9HAZ2 1276 aa10.62□□□□□ -0.71
CLN5-217ENST00000637278 CDK13Q14004 1512 aaKnown RBP10.62□□□□□ -0.71
CLN5-217ENST00000637278 PLCH2O75038 1416 aa10.62□□□□□ -0.71
CLN5-217ENST00000637278 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.61□□□□□ -0.71
CLN5-217ENST00000637278 TRAK2O60296 914 aa10.6□□□□□ -0.71
CLN5-217ENST00000637278 TRAIPQ9BWF2 469 aa10.6□□□□□ -0.71
CLN5-217ENST00000637278 TROQ12816 1431 aaPredicted RBP10.6□□□□□ -0.71
CLN5-217ENST00000637278 SECISBP2LQ93073 1101 aaKnown RBP10.6□□□□□ -0.71
CLN5-217ENST00000637278 PTPRMP28827 1452 aa10.6□□□□□ -0.71
CLN5-217ENST00000637278 STK25O00506 426 aa10.59□□□□□ -0.71
CLN5-217ENST00000637278 MADDQ8WXG6 1647 aa10.59□□□□□ -0.71
CLN5-217ENST00000637278 FYCO1Q9BQS8 1478 aa10.59□□□□□ -0.71
CLN5-217ENST00000637278 CASKIN1Q8WXD9 1431 aa10.59□□□□□ -0.71
CLN5-217ENST00000637278 PCGF6Q9BYE7 350 aa10.59□□□□□ -0.71
CLN5-217ENST00000637278 REREQ9P2R6 1566 aa10.58□□□□□ -0.72
CLN5-217ENST00000637278 PREX2Q70Z35 1606 aa10.58□□□□□ -0.72
CLN5-217ENST00000637278 ZNF518AQ6AHZ1 1483 aa10.57□□□□□ -0.72
CLN5-217ENST00000637278 PCF11O94913 1555 aaKnown RBP10.57□□□□□ -0.72
CLN5-217ENST00000637278 KDM5CP41229 1560 aa10.57□□□□□ -0.72
CLN5-217ENST00000637278 NCLP19338 710 aaKnown RBP10.56□□□□□ -0.72
CLN5-217ENST00000637278 PLCD3Q8N3E9 789 aa10.56□□□□□ -0.72
CLN5-217ENST00000637278 RIMS1Q86UR5 1692 aaKnown RBP10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms