RNA–Protein interactions for RNA: ENST00000637239.2

TCF4-285, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 7,771 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-285ENST00000637239 CNKSR2Q8WXI2 1034 aa8.34□□□□□ -1.08
TCF4-285ENST00000637239 IPO8O15397 1037 aaKnown RBP8.33□□□□□ -1.08
TCF4-285ENST00000637239 L1TD1Q5T7N2 865 aaKnown RBP8.33□□□□□ -1.08
TCF4-285ENST00000637239 FRAT1Q92837 279 aaPredicted RBP8.33□□□□□ -1.08
TCF4-285ENST00000637239 NUP155O75694 1391 aa8.33□□□□□ -1.08
TCF4-285ENST00000637239 VGFO15240 615 aaPredicted RBP8.33□□□□□ -1.08
TCF4-285ENST00000637239 PEG3Q9GZU2 1588 aa8.33□□□□□ -1.08
TCF4-285ENST00000637239 PIP4K2BP78356 416 aa8.33□□□□□ -1.08
TCF4-285ENST00000637239 KIAA1211Q6ZU35 1233 aa8.33□□□□□ -1.08
TCF4-285ENST00000637239 MAGI1Q96QZ7 1491 aaPredicted RBP8.33□□□□□ -1.08
TCF4-285ENST00000637239 HSP90AB1P08238 724 aaKnown RBP8.33□□□□□ -1.08
TCF4-285ENST00000637239 PPP1R1BQ9UD71 204 aaPredicted RBP8.32□□□□□ -1.08
TCF4-285ENST00000637239 PKD2Q13563 968 aa8.32□□□□□ -1.08
TCF4-285ENST00000637239 NUTM2DQ5VT03 806 aaPredicted RBP8.32□□□□□ -1.08
TCF4-285ENST00000637239 NRDCO43847 1150 aa8.31□□□□□ -1.08
TCF4-285ENST00000637239 ERICH6BQ5W0A0 696 aa8.31□□□□□ -1.08
TCF4-285ENST00000637239 NESP48681 1621 aa8.31□□□□□ -1.08
TCF4-285ENST00000637239 RGS3P49796 1198 aa8.31□□□□□ -1.08
TCF4-285ENST00000637239 RBM33Q96EV2 1170 aaKnown RBP8.31□□□□□ -1.08
TCF4-285ENST00000637239 AQRO60306 1485 aaKnown RBP eCLIP8.31□□□□□ -1.08
TCF4-285ENST00000637239 CHAF1AQ13111 956 aaPredicted RBP8.31□□□□□ -1.08
TCF4-285ENST00000637239 NUTM2FA1L443 756 aa8.31□□□□□ -1.08
TCF4-285ENST00000637239 MARCH6O60337 910 aa8.3□□□□□ -1.08
TCF4-285ENST00000637239 COG3Q96JB2 828 aa8.3□□□□□ -1.08
TCF4-285ENST00000637239 NAP1L5Q96NT1 182 aaPredicted RBP8.3□□□□□ -1.08
TCF4-285ENST00000637239 GOLGA6L4A6NEF3 574 aa8.3□□□□□ -1.08
TCF4-285ENST00000637239 SYNJ1O43426 1573 aa8.3□□□□□ -1.08
TCF4-285ENST00000637239 DMRT2Q9Y5R5 561 aa8.3□□□□□ -1.08
TCF4-285ENST00000637239 SYNJ2O15056 1496 aa8.29□□□□□ -1.08
TCF4-285ENST00000637239 CCAR1Q8IX12 1150 aaKnown RBP8.29□□□□□ -1.08
TCF4-285ENST00000637239 UNC13AQ9UPW8 1703 aa8.29□□□□□ -1.08
TCF4-285ENST00000637239 NUTM2BA6NNL0 878 aaPredicted RBP8.29□□□□□ -1.08
TCF4-285ENST00000637239 NUTM2EB1AL46 878 aaPredicted RBP8.29□□□□□ -1.08
TCF4-285ENST00000637239 NUTM2AQ8IVF1 878 aaPredicted RBP8.29□□□□□ -1.08
TCF4-285ENST00000637239 VPS37DQ86XT2 251 aa8.29□□□□□ -1.08
TCF4-285ENST00000637239 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.28□□□□□ -1.08
TCF4-285ENST00000637239 PRG4Q92954 1404 aaPredicted RBP8.28□□□□□ -1.08
TCF4-285ENST00000637239 KTN1Q86UP2 1357 aaKnown RBP8.28□□□□□ -1.08
TCF4-285ENST00000637239 CCDC34Q96HJ3 373 aa8.28□□□□□ -1.08
TCF4-285ENST00000637239 RAD54L2Q9Y4B4 1467 aa8.28□□□□□ -1.08
TCF4-285ENST00000637239 GPRASP1Q5JY77 1395 aa8.28□□□□□ -1.08
TCF4-285ENST00000637239 PROSER2Q86WR7 435 aaPredicted RBP8.28□□□□□ -1.08
TCF4-285ENST00000637239 U2AF1L5P0DN76 240 aaPredicted RBP8.27□□□□□ -1.09
TCF4-285ENST00000637239 U2AF1Q01081 240 aaKnown RBP eCLIP8.27□□□□□ -1.09
TCF4-285ENST00000637239 HSP90B1P14625 803 aaKnown RBP8.27□□□□□ -1.09
TCF4-285ENST00000637239 LRRFIP1Q32MZ4 808 aaKnown RBP8.27□□□□□ -1.09
TCF4-285ENST00000637239 POLA1P09884 1462 aaPredicted RBP8.27□□□□□ -1.09
TCF4-285ENST00000637239 EVC2Q86UK5 1308 aa8.27□□□□□ -1.09
TCF4-285ENST00000637239 VPS8Q8N3P4 1428 aa8.26□□□□□ -1.09
TCF4-285ENST00000637239 IGF1RP08069 1367 aa8.26□□□□□ -1.09
TCF4-285ENST00000637239 TEFQ10587 303 aa8.26□□□□□ -1.09
TCF4-285ENST00000637239 THEMISQ8N1K5 641 aaPredicted RBP8.26□□□□□ -1.09
TCF4-285ENST00000637239 HTATSF1O43719 755 aaKnown RBP8.26□□□□□ -1.09
TCF4-285ENST00000637239 SMC4Q9NTJ3 1288 aa8.25□□□□□ -1.09
TCF4-285ENST00000637239 HMMRO75330 724 aa8.25□□□□□ -1.09
TCF4-285ENST00000637239 NEXNQ0ZGT2 675 aa8.25□□□□□ -1.09
TCF4-285ENST00000637239 RAPGEF4Q8WZA2 1011 aa8.25□□□□□ -1.09
TCF4-285ENST00000637239 SETD5Q9C0A6 1442 aa8.24□□□□□ -1.09
TCF4-285ENST00000637239 SNAPC4Q5SXM2 1469 aa8.24□□□□□ -1.09
TCF4-285ENST00000637239 DEKP35659 375 aaKnown RBP8.24□□□□□ -1.09
TCF4-285ENST00000637239 RASSF8Q8NHQ8 419 aa8.24□□□□□ -1.09
TCF4-285ENST00000637239 RAD21O60216 631 aa8.24□□□□□ -1.09
TCF4-285ENST00000637239 TOMM22Q9NS69 142 aa8.24□□□□□ -1.09
TCF4-285ENST00000637239 WDHD1O75717 1129 aaPredicted RBP8.24□□□□□ -1.09
TCF4-285ENST00000637239 PLEKHH2Q8IVE3 1493 aa8.24□□□□□ -1.09
TCF4-285ENST00000637239 SPRYD3Q8NCJ5 442 aa8.24□□□□□ -1.09
TCF4-285ENST00000637239 SMG6Q86US8 1419 aaKnown RBP8.23□□□□□ -1.09
TCF4-285ENST00000637239 HSCBQ8IWL3 235 aa8.23□□□□□ -1.09
TCF4-285ENST00000637239 KIAA0586Q9BVV6 1533 aa8.23□□□□□ -1.09
TCF4-285ENST00000637239 ANKLE2Q86XL3 938 aa8.23□□□□□ -1.09
TCF4-285ENST00000637239 SIN3AQ96ST3 1273 aa8.23□□□□□ -1.09
TCF4-285ENST00000637239 ARHGAP5Q13017 1502 aa8.23□□□□□ -1.09
TCF4-285ENST00000637239 DRC7Q8IY82 874 aa8.23□□□□□ -1.09
TCF4-285ENST00000637239 B4GALNT3Q6L9W6 998 aa8.23□□□□□ -1.09
TCF4-285ENST00000637239 PPP4R2Q9NY27 417 aa8.22□□□□□ -1.09
TCF4-285ENST00000637239 NOP58Q9Y2X3 529 aaKnown RBP8.22□□□□□ -1.09
TCF4-285ENST00000637239 ABCA10Q8WWZ4 1543 aa8.22□□□□□ -1.09
TCF4-285ENST00000637239 DDX58O95786 925 aaKnown RBP8.22□□□□□ -1.09
TCF4-285ENST00000637239 CCDC144AA2RUR9 1427 aa8.22□□□□□ -1.09
TCF4-285ENST00000637239 PDE3BQ13370 1112 aa8.22□□□□□ -1.09
TCF4-285ENST00000637239 TRAK1Q9UPV9 953 aa8.22□□□□□ -1.09
TCF4-285ENST00000637239 WWC2Q6AWC2 1192 aa8.22□□□□□ -1.09
TCF4-285ENST00000637239 WWC1Q8IX03 1113 aa8.21□□□□□ -1.09
TCF4-285ENST00000637239 CEP89Q96ST8 783 aa8.21□□□□□ -1.09
TCF4-285ENST00000637239 AKAP17AQ02040 695 aaKnown RBP8.21□□□□□ -1.1
TCF4-285ENST00000637239 CHMP4CQ96CF2 233 aa8.21□□□□□ -1.1
TCF4-285ENST00000637239 KIF6Q6ZMV9 814 aa8.2□□□□□ -1.1
TCF4-285ENST00000637239 DHX57Q6P158 1386 aaKnown RBP8.2□□□□□ -1.1
TCF4-285ENST00000637239 TOP2BQ02880 1626 aa8.2□□□□□ -1.1
TCF4-285ENST00000637239 FHOD3Q2V2M9 1422 aa8.2□□□□□ -1.1
TCF4-285ENST00000637239 MIA2Q96PC5 1412 aa8.2□□□□□ -1.1
TCF4-285ENST00000637239 ERICH3Q5RHP9 1530 aa8.2□□□□□ -1.1
TCF4-285ENST00000637239 ESCO1Q5FWF5 840 aa8.2□□□□□ -1.1
TCF4-285ENST00000637239 EFCAB5A4FU69 1503 aa8.2□□□□□ -1.1
TCF4-285ENST00000637239 APBB1O00213 710 aa8.2□□□□□ -1.1
TCF4-285ENST00000637239 TPM4P67936 248 aa8.2□□□□□ -1.1
TCF4-285ENST00000637239 SLC4A10Q6U841 1118 aa8.2□□□□□ -1.1
TCF4-285ENST00000637239 TXNDC2Q86VQ3 553 aa8.2□□□□□ -1.1
TCF4-285ENST00000637239 CCDC43Q96MW1 224 aaKnown RBP8.19□□□□□ -1.1
TCF4-285ENST00000637239 SYNE3Q6ZMZ3 975 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms