RNA–Protein interactions for RNA: ENST00000636966.1

CACNA1A-232, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,938 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-232ENST00000636966 SETD5Q9C0A6 1442 aa12.18□□□□□ -0.46
CACNA1A-232ENST00000636966 DENND4BO75064 1496 aaPredicted RBP12.18□□□□□ -0.46
CACNA1A-232ENST00000636966 IFT172Q9UG01 1749 aa12.18□□□□□ -0.46
CACNA1A-232ENST00000636966 ARHGEF40Q8TER5 1519 aa12.18□□□□□ -0.46
CACNA1A-232ENST00000636966 DIP2CQ9Y2E4 1556 aa12.17□□□□□ -0.46
CACNA1A-232ENST00000636966 POGZQ7Z3K3 1410 aa12.16□□□□□ -0.46
CACNA1A-232ENST00000636966 PIK3C2BO00750 1634 aa12.16□□□□□ -0.46
CACNA1A-232ENST00000636966 KIF15Q9NS87 1388 aa12.13□□□□□ -0.47
CACNA1A-232ENST00000636966 TSPY4P0CV99 314 aa12.13□□□□□ -0.47
CACNA1A-232ENST00000636966 TSPY10P0CW01 314 aa12.13□□□□□ -0.47
CACNA1A-232ENST00000636966 DHX57Q6P158 1386 aaKnown RBP12.13□□□□□ -0.47
CACNA1A-232ENST00000636966 ATP10AO60312 1499 aa12.12□□□□□ -0.47
CACNA1A-232ENST00000636966 ZNF518AQ6AHZ1 1483 aa12.12□□□□□ -0.47
CACNA1A-232ENST00000636966 TRHP20396 242 aaPredicted RBP12.12□□□□□ -0.47
CACNA1A-232ENST00000636966 RSPH4AQ5TD94 716 aa12.12□□□□□ -0.47
CACNA1A-232ENST00000636966 ATP7AQ04656 1500 aa12.12□□□□□ -0.47
CACNA1A-232ENST00000636966 ANKRD30AQ9BXX3 1397 aa12.11□□□□□ -0.47
CACNA1A-232ENST00000636966 SPAG9O60271 1321 aaKnown RBP12.11□□□□□ -0.47
CACNA1A-232ENST00000636966 TET3O43151 1660 aa12.11□□□□□ -0.47
CACNA1A-232ENST00000636966 YEATS2Q9ULM3 1422 aa12.11□□□□□ -0.47
CACNA1A-232ENST00000636966 MSH5O43196 834 aa12.1□□□□□ -0.47
CACNA1A-232ENST00000636966 ANKRD50Q9ULJ7 1429 aa12.1□□□□□ -0.47
CACNA1A-232ENST00000636966 DUOX2Q9NRD8 1548 aa12.09□□□□□ -0.47
CACNA1A-232ENST00000636966 TEX14Q8IWB6 1497 aa12.09□□□□□ -0.47
CACNA1A-232ENST00000636966 CEP152O94986 1710 aa12.08□□□□□ -0.47
CACNA1A-232ENST00000636966 ERBINQ96RT1 1412 aa12.08□□□□□ -0.48
CACNA1A-232ENST00000636966 PZPP20742 1482 aa12.05□□□□□ -0.48
CACNA1A-232ENST00000636966 ADAMTSL3P82987 1691 aa12.04□□□□□ -0.48
CACNA1A-232ENST00000636966 E9PCH4 1651 aa12.04□□□□□ -0.48
CACNA1A-232ENST00000636966 PRKCSHP14314 528 aaPredicted RBP12.04□□□□□ -0.48
CACNA1A-232ENST00000636966 ZNF142P52746 1687 aaPredicted RBP12.03□□□□□ -0.48
CACNA1A-232ENST00000636966 LAMC1P11047 1609 aa12.03□□□□□ -0.48
CACNA1A-232ENST00000636966 SPHKAPQ2M3C7 1700 aa12.02□□□□□ -0.48
CACNA1A-232ENST00000636966 DHX29Q7Z478 1369 aaKnown RBP12.02□□□□□ -0.48
CACNA1A-232ENST00000636966 CAMSAP1Q5T5Y3 1602 aa12.02□□□□□ -0.49
CACNA1A-232ENST00000636966 A2MP01023 1474 aa12.01□□□□□ -0.49
CACNA1A-232ENST00000636966 MPHOSPH9Q99550 1183 aa12.01□□□□□ -0.49
CACNA1A-232ENST00000636966 ACIN1Q9UKV3 1341 aaKnown RBP12□□□□□ -0.49
CACNA1A-232ENST00000636966 TRIM52Q96A61 297 aa12□□□□□ -0.49
CACNA1A-232ENST00000636966 KIAA1210Q9ULL0 1709 aa12□□□□□ -0.49
CACNA1A-232ENST00000636966 MYT1LQ9UL68 1186 aa12□□□□□ -0.49
CACNA1A-232ENST00000636966 MAPK8IP2Q13387 824 aaPredicted RBP11.99□□□□□ -0.49
CACNA1A-232ENST00000636966 POLR1AO95602 1720 aaPredicted RBP11.99□□□□□ -0.49
CACNA1A-232ENST00000636966 PELP1Q8IZL8 1130 aaKnown RBP11.99□□□□□ -0.49
CACNA1A-232ENST00000636966 NUP155O75694 1391 aa11.99□□□□□ -0.49
CACNA1A-232ENST00000636966 SETD1AO15047 1707 aaKnown RBP11.99□□□□□ -0.49
CACNA1A-232ENST00000636966 SIN3AQ96ST3 1273 aa11.98□□□□□ -0.49
CACNA1A-232ENST00000636966 EFCAB6Q5THR3 1501 aa11.98□□□□□ -0.49
CACNA1A-232ENST00000636966 KIF3BO15066 747 aa11.98□□□□□ -0.49
CACNA1A-232ENST00000636966 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.98□□□□□ -0.49
CACNA1A-232ENST00000636966 MADDQ8WXG6 1647 aa11.97□□□□□ -0.49
CACNA1A-232ENST00000636966 SLC4A1APQ9BWU0 796 aaKnown RBP11.95□□□□□ -0.5
CACNA1A-232ENST00000636966 ARHGAP31Q2M1Z3 1444 aa11.95□□□□□ -0.5
CACNA1A-232ENST00000636966 RPRD2Q5VT52 1461 aaKnown RBP11.94□□□□□ -0.5
CACNA1A-232ENST00000636966 NPM3O75607 178 aaKnown RBP11.94□□□□□ -0.5
CACNA1A-232ENST00000636966 PREX1Q8TCU6 1659 aa11.94□□□□□ -0.5
CACNA1A-232ENST00000636966 PLA2R1Q13018 1463 aa11.94□□□□□ -0.5
CACNA1A-232ENST00000636966 PKD2Q13563 968 aa11.94□□□□□ -0.5
CACNA1A-232ENST00000636966 TRPM2O94759 1503 aa11.94□□□□□ -0.5
CACNA1A-232ENST00000636966 SPATA31D1Q6ZQQ2 1576 aa11.94□□□□□ -0.5
CACNA1A-232ENST00000636966 DIEXFQ68CQ4 756 aaKnown RBP11.93□□□□□ -0.5
CACNA1A-232ENST00000636966 ANKRD30BQ9BXX2 1392 aa11.93□□□□□ -0.5
CACNA1A-232ENST00000636966 PTPRTO14522 1441 aa11.93□□□□□ -0.5
CACNA1A-232ENST00000636966 FER1L4A9Z1Z3 1794 aa11.93□□□□□ -0.5
CACNA1A-232ENST00000636966 GGT6Q6P531 493 aa11.92□□□□□ -0.5
CACNA1A-232ENST00000636966 SLC24A1O60721 1099 aa11.92□□□□□ -0.5
CACNA1A-232ENST00000636966 PPLO60437 1756 aa11.91□□□□□ -0.5
CACNA1A-232ENST00000636966 ABCC3O15438 1527 aa11.89□□□□□ -0.51
CACNA1A-232ENST00000636966 NEUROD1Q13562 356 aa11.89□□□□□ -0.51
CACNA1A-232ENST00000636966 NCBP3Q53F19 620 aaKnown RBP11.89□□□□□ -0.51
CACNA1A-232ENST00000636966 NRXN1Q9ULB1 1477 aa11.89□□□□□ -0.51
CACNA1A-232ENST00000636966 SYNMO15061 1565 aa11.88□□□□□ -0.51
CACNA1A-232ENST00000636966 CLSPNQ9HAW4 1339 aa11.88□□□□□ -0.51
CACNA1A-232ENST00000636966 PRAG1Q86YV5 1406 aa11.88□□□□□ -0.51
CACNA1A-232ENST00000636966 MYO3AQ8NEV4 1616 aa11.87□□□□□ -0.51
CACNA1A-232ENST00000636966 C3P01024 1663 aa11.87□□□□□ -0.51
CACNA1A-232ENST00000636966 ZNF316A6NFI3 1004 aaPredicted RBP11.87□□□□□ -0.51
CACNA1A-232ENST00000636966 NPATQ14207 1427 aa11.86□□□□□ -0.51
CACNA1A-232ENST00000636966 MLECQ14165 292 aa11.86□□□□□ -0.51
CACNA1A-232ENST00000636966 UGGT1Q9NYU2 1555 aa11.86□□□□□ -0.51
CACNA1A-232ENST00000636966 ADGRB3O60242 1522 aa11.85□□□□□ -0.51
CACNA1A-232ENST00000636966 KNDC1Q76NI1 1749 aa11.84□□□□□ -0.51
CACNA1A-232ENST00000636966 WASHC2CQ9Y4E1 1318 aa11.84□□□□□ -0.51
CACNA1A-232ENST00000636966 TMEM131LA2VDJ0 1609 aa11.84□□□□□ -0.51
CACNA1A-232ENST00000636966 CFAP65Q6ZU64 1925 aaKnown RBP11.83□□□□□ -0.52
CACNA1A-232ENST00000636966 CLTCL1P53675 1640 aa11.83□□□□□ -0.52
CACNA1A-232ENST00000636966 CENPBP07199 599 aaPredicted RBP11.83□□□□□ -0.52
CACNA1A-232ENST00000636966 CLTCQ00610 1675 aaKnown RBP11.83□□□□□ -0.52
CACNA1A-232ENST00000636966 CNKSR2Q8WXI2 1034 aa11.82□□□□□ -0.52
CACNA1A-232ENST00000636966 UBR1Q8IWV7 1749 aa11.82□□□□□ -0.52
CACNA1A-232ENST00000636966 FBXO31Q5XUX0 539 aaPredicted RBP11.81□□□□□ -0.52
CACNA1A-232ENST00000636966 SCAF1Q9H7N4 1312 aaKnown RBP11.81□□□□□ -0.52
CACNA1A-232ENST00000636966 NOS1P29475 1434 aa11.81□□□□□ -0.52
CACNA1A-232ENST00000636966 KANK1Q14678 1352 aa11.8□□□□□ -0.52
CACNA1A-232ENST00000636966 IQGAP1P46940 1657 aa11.8□□□□□ -0.52
CACNA1A-232ENST00000636966 KIF1BO60333 1816 aa11.8□□□□□ -0.52
CACNA1A-232ENST00000636966 TRPM1Q7Z4N2 1603 aa11.8□□□□□ -0.52
CACNA1A-232ENST00000636966 RIMS1Q86UR5 1692 aaKnown RBP11.8□□□□□ -0.52
CACNA1A-232ENST00000636966 MYT1Q01538 1121 aa11.8□□□□□ -0.52
CACNA1A-232ENST00000636966 ARID4BQ4LE39 1312 aaPredicted RBP11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms