RNA–Protein interactions for RNA: ENST00000636816.1

CACNA1A-231, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,978 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-231ENST00000636816 NEO1Q92859 1461 aa22.53■■□□□ 1.2
CACNA1A-231ENST00000636816 KIF3BO15066 747 aa22.53■■□□□ 1.2
CACNA1A-231ENST00000636816 RAPGEF3O95398 923 aa22.53■■□□□ 1.2
CACNA1A-231ENST00000636816 FAM69CQ0P6D2 419 aa22.53■■□□□ 1.2
CACNA1A-231ENST00000636816 GLI2P10070 1586 aa22.53■■□□□ 1.2
CACNA1A-231ENST00000636816 KDM5CP41229 1560 aa22.52■■□□□ 1.2
CACNA1A-231ENST00000636816 DEPDC5O75140 1603 aa22.51■■□□□ 1.19
CACNA1A-231ENST00000636816 HSPA5P11021 654 aaKnown RBP22.5■■□□□ 1.19
CACNA1A-231ENST00000636816 DDX10Q13206 875 aaKnown RBP22.5■■□□□ 1.19
CACNA1A-231ENST00000636816 DIP2BQ9P265 1576 aa22.49■■□□□ 1.19
CACNA1A-231ENST00000636816 ZNF326Q5BKZ1 582 aaKnown RBP22.48■■□□□ 1.19
CACNA1A-231ENST00000636816 MLH3Q9UHC1 1453 aa22.48■■□□□ 1.19
CACNA1A-231ENST00000636816 CCDC144AA2RUR9 1427 aa22.48■■□□□ 1.19
CACNA1A-231ENST00000636816 E9PCH4 1651 aa22.47■■□□□ 1.19
CACNA1A-231ENST00000636816 HECW2Q9P2P5 1572 aa22.47■■□□□ 1.19
CACNA1A-231ENST00000636816 EIF2AK4Q9P2K8 1649 aaKnown RBP22.46■■□□□ 1.19
CACNA1A-231ENST00000636816 A2MP01023 1474 aa22.46■■□□□ 1.19
CACNA1A-231ENST00000636816 MROH1Q8NDA8 1641 aa22.45■■□□□ 1.19
CACNA1A-231ENST00000636816 KDM2AQ9Y2K7 1162 aa22.45■■□□□ 1.18
CACNA1A-231ENST00000636816 TSPOAP1O95153 1857 aa22.45■■□□□ 1.18
CACNA1A-231ENST00000636816 EIF4G2P78344 907 aaKnown RBP eCLIP22.45■■□□□ 1.18
CACNA1A-231ENST00000636816 VWDEQ8N2E2 1590 aa22.44■■□□□ 1.18
CACNA1A-231ENST00000636816 DCAF11Q8TEB1 546 aa22.43■■□□□ 1.18
CACNA1A-231ENST00000636816 ABCA6Q8N139 1617 aa22.43■■□□□ 1.18
CACNA1A-231ENST00000636816 RICTORQ6R327 1708 aa22.43■■□□□ 1.18
CACNA1A-231ENST00000636816 RGL3Q3MIN7 710 aa22.42■■□□□ 1.18
CACNA1A-231ENST00000636816 FRMPD1Q5SYB0 1578 aa22.42■■□□□ 1.18
CACNA1A-231ENST00000636816 ATP10AO60312 1499 aa22.42■■□□□ 1.18
CACNA1A-231ENST00000636816 KANK1Q14678 1352 aa22.41■■□□□ 1.18
CACNA1A-231ENST00000636816 PRDM15P57071 1507 aaPredicted RBP22.4■■□□□ 1.18
CACNA1A-231ENST00000636816 TET3O43151 1660 aa22.4■■□□□ 1.18
CACNA1A-231ENST00000636816 UHRF1BP1Q6BDS2 1440 aa22.39■■□□□ 1.18
CACNA1A-231ENST00000636816 PPRC1Q5VV67 1664 aaKnown RBP22.39■■□□□ 1.18
CACNA1A-231ENST00000636816 SPATA31E1Q6ZUB1 1445 aa22.35■■□□□ 1.17
CACNA1A-231ENST00000636816 SPHKAPQ2M3C7 1700 aa22.35■■□□□ 1.17
CACNA1A-231ENST00000636816 C11orf95C9JLR9 678 aaPredicted RBP22.35■■□□□ 1.17
CACNA1A-231ENST00000636816 DIP2CQ9Y2E4 1556 aa22.35■■□□□ 1.17
CACNA1A-231ENST00000636816 WASHC2AQ641Q2 1341 aa22.34■■□□□ 1.17
CACNA1A-231ENST00000636816 GGT6Q6P531 493 aa22.34■■□□□ 1.17
CACNA1A-231ENST00000636816 RNF17Q9BXT8 1623 aaKnown RBP22.34■■□□□ 1.17
CACNA1A-231ENST00000636816 YEATS2Q9ULM3 1422 aa22.34■■□□□ 1.17
CACNA1A-231ENST00000636816 PTPRTO14522 1441 aa22.34■■□□□ 1.17
CACNA1A-231ENST00000636816 CEP152O94986 1710 aa22.34■■□□□ 1.17
CACNA1A-231ENST00000636816 KIF13AQ9H1H9 1805 aa22.33■■□□□ 1.17
CACNA1A-231ENST00000636816 TRPM2O94759 1503 aa22.32■■□□□ 1.16
CACNA1A-231ENST00000636816 RALGAPBQ86X10 1494 aa22.31■■□□□ 1.16
CACNA1A-231ENST00000636816 YTHDC1Q96MU7 727 aaKnown RBP22.3■■□□□ 1.16
CACNA1A-231ENST00000636816 CLTCL1P53675 1640 aa22.3■■□□□ 1.16
CACNA1A-231ENST00000636816 BCORL1Q5H9F3 1711 aa22.29■■□□□ 1.16
CACNA1A-231ENST00000636816 EFCAB6Q5THR3 1501 aa22.28■■□□□ 1.16
CACNA1A-231ENST00000636816 PRAG1Q86YV5 1406 aa22.28■■□□□ 1.16
CACNA1A-231ENST00000636816 USP47Q96K76 1375 aa22.27■■□□□ 1.16
CACNA1A-231ENST00000636816 LMTK2Q8IWU2 1503 aa22.27■■□□□ 1.16
CACNA1A-231ENST00000636816 CARD11Q9BXL7 1154 aa22.27■■□□□ 1.15
CACNA1A-231ENST00000636816 CFAP65Q6ZU64 1925 aaKnown RBP22.26■■□□□ 1.15
CACNA1A-231ENST00000636816 UGGT1Q9NYU2 1555 aa22.25■■□□□ 1.15
CACNA1A-231ENST00000636816 TRPM1Q7Z4N2 1603 aa22.24■■□□□ 1.15
CACNA1A-231ENST00000636816 NBPF1Q3BBV0 1214 aa22.23■■□□□ 1.15
CACNA1A-231ENST00000636816 WASHC2CQ9Y4E1 1318 aa22.23■■□□□ 1.15
CACNA1A-231ENST00000636816 CCDC7Q96M83 1385 aa22.23■■□□□ 1.15
CACNA1A-231ENST00000636816 ZMYM4Q5VZL5 1548 aa22.23■■□□□ 1.15
CACNA1A-231ENST00000636816 ROCK2O75116 1388 aaKnown RBP22.21■■□□□ 1.15
CACNA1A-231ENST00000636816 ABCC3O15438 1527 aa22.21■■□□□ 1.15
CACNA1A-231ENST00000636816 COL17A1Q9UMD9 1497 aaPredicted RBP22.2■■□□□ 1.14
CACNA1A-231ENST00000636816 NPATQ14207 1427 aa22.2■■□□□ 1.14
CACNA1A-231ENST00000636816 KIF7Q2M1P5 1343 aa22.2■■□□□ 1.14
CACNA1A-231ENST00000636816 POLR1AO95602 1720 aaPredicted RBP22.18■■□□□ 1.14
CACNA1A-231ENST00000636816 ST20-MTHFSA0A0A6YYL1 179 aa22.16■■□□□ 1.14
CACNA1A-231ENST00000636816 CAMSAP1Q5T5Y3 1602 aa22.16■■□□□ 1.14
CACNA1A-231ENST00000636816 ANP32CO43423 234 aa22.15■■□□□ 1.14
CACNA1A-231ENST00000636816 KIF1BO60333 1816 aa22.14■■□□□ 1.14
CACNA1A-231ENST00000636816 SIGLEC1Q9BZZ2 1709 aa22.14■■□□□ 1.13
CACNA1A-231ENST00000636816 MADDQ8WXG6 1647 aa22.12■■□□□ 1.13
CACNA1A-231ENST00000636816 GPRASP1Q5JY77 1395 aa22.12■■□□□ 1.13
CACNA1A-231ENST00000636816 MROH2AA6NES4 1674 aa22.12■■□□□ 1.13
CACNA1A-231ENST00000636816 CNTLNQ9NXG0 1405 aa22.11■■□□□ 1.13
CACNA1A-231ENST00000636816 CENPBP07199 599 aaPredicted RBP22.11■■□□□ 1.13
CACNA1A-231ENST00000636816 POLR3GLQ9BT43 218 aa22.1■■□□□ 1.13
CACNA1A-231ENST00000636816 NEURL4Q96JN8 1562 aa22.09■■□□□ 1.13
CACNA1A-231ENST00000636816 CHGAP10645 457 aaKnown RBP22.08■■□□□ 1.13
CACNA1A-231ENST00000636816 LAMC1P11047 1609 aa22.07■■□□□ 1.12
CACNA1A-231ENST00000636816 ZC3H13Q5T200 1668 aaKnown RBP22.07■■□□□ 1.12
CACNA1A-231ENST00000636816 NOS1P29475 1434 aa22.06■■□□□ 1.12
CACNA1A-231ENST00000636816 REREQ9P2R6 1566 aa22.05■■□□□ 1.12
CACNA1A-231ENST00000636816 STAC3Q96MF2 364 aa22.05■■□□□ 1.12
CACNA1A-231ENST00000636816 SYNMO15061 1565 aa22.04■■□□□ 1.12
CACNA1A-231ENST00000636816 ARHGAP31Q2M1Z3 1444 aa22.04■■□□□ 1.12
CACNA1A-231ENST00000636816 ADGRF5Q8IZF2 1346 aa22.04■■□□□ 1.12
CACNA1A-231ENST00000636816 IFT172Q9UG01 1749 aa22.04■■□□□ 1.12
CACNA1A-231ENST00000636816 ADGRB3O60242 1522 aa22.04■■□□□ 1.12
CACNA1A-231ENST00000636816 CCER2I3L3R5 266 aa22.03■■□□□ 1.12
CACNA1A-231ENST00000636816 AGLP35573 1532 aa22.02■■□□□ 1.12
CACNA1A-231ENST00000636816 ARID4BQ4LE39 1312 aaPredicted RBP22.01■■□□□ 1.11
CACNA1A-231ENST00000636816 MLECQ14165 292 aa22.01■■□□□ 1.11
CACNA1A-231ENST00000636816 PIK3C2BO00750 1634 aa22■■□□□ 1.11
CACNA1A-231ENST00000636816 FBXO31Q5XUX0 539 aaPredicted RBP21.99■■□□□ 1.11
CACNA1A-231ENST00000636816 ARHGEF40Q8TER5 1519 aa21.99■■□□□ 1.11
CACNA1A-231ENST00000636816 MYOM2P54296 1465 aa21.99■■□□□ 1.11
CACNA1A-231ENST00000636816 CFAP70Q5T0N1 1121 aa21.99■■□□□ 1.11
CACNA1A-231ENST00000636816 TESK2Q96S53 571 aa21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms