RNA–Protein interactions for RNA: ENST00000636792.1

UPF3B-205, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3B, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-205ENST00000636792 ABCC10Q5T3U5 1492 aa10.52□□□□□ -0.73
UPF3B-205ENST00000636792 TTBK1Q5TCY1 1321 aaPredicted RBP10.52□□□□□ -0.73
UPF3B-205ENST00000636792 MTUS2Q5JR59 1369 aa10.52□□□□□ -0.73
UPF3B-205ENST00000636792 MAP3K4Q9Y6R4 1608 aa10.51□□□□□ -0.73
UPF3B-205ENST00000636792 MYO5CQ9NQX4 1742 aa10.51□□□□□ -0.73
UPF3B-205ENST00000636792 CDAN1Q8IWY9 1227 aa10.51□□□□□ -0.73
UPF3B-205ENST00000636792 MAGI3Q5TCQ9 1506 aa10.51□□□□□ -0.73
UPF3B-205ENST00000636792 CFAP74Q9C0B2 1584 aa10.51□□□□□ -0.73
UPF3B-205ENST00000636792 PLEKHD1A6NEE1 506 aa10.5□□□□□ -0.73
UPF3B-205ENST00000636792 PREX2Q70Z35 1606 aa10.49□□□□□ -0.73
UPF3B-205ENST00000636792 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.48□□□□□ -0.73
UPF3B-205ENST00000636792 TTC37Q6PGP7 1564 aa10.48□□□□□ -0.73
UPF3B-205ENST00000636792 CDC42BPAQ5VT25 1732 aa10.47□□□□□ -0.73
UPF3B-205ENST00000636792 ATP1B4Q9UN42 357 aaPredicted RBP10.46□□□□□ -0.73
UPF3B-205ENST00000636792 NCOA2Q15596 1464 aa10.45□□□□□ -0.74
UPF3B-205ENST00000636792 TEX14Q8IWB6 1497 aa10.45□□□□□ -0.74
UPF3B-205ENST00000636792 ST18O60284 1047 aa10.44□□□□□ -0.74
UPF3B-205ENST00000636792 CDC42BPBQ9Y5S2 1711 aa10.44□□□□□ -0.74
UPF3B-205ENST00000636792 MIA2Q96PC5 1412 aa10.43□□□□□ -0.74
UPF3B-205ENST00000636792 PHLDB1Q86UU1 1377 aa10.43□□□□□ -0.74
UPF3B-205ENST00000636792 PPRC1Q5VV67 1664 aaKnown RBP10.43□□□□□ -0.74
UPF3B-205ENST00000636792 NEO1Q92859 1461 aa10.42□□□□□ -0.74
UPF3B-205ENST00000636792 IRX5P78411 483 aaPredicted RBP10.42□□□□□ -0.74
UPF3B-205ENST00000636792 PLCH2O75038 1416 aa10.41□□□□□ -0.74
UPF3B-205ENST00000636792 MYOM3Q5VTT5 1437 aa10.41□□□□□ -0.74
UPF3B-205ENST00000636792 OCEL1Q9H607 264 aa10.41□□□□□ -0.74
UPF3B-205ENST00000636792 PLEKHH2Q8IVE3 1493 aa10.41□□□□□ -0.74
UPF3B-205ENST00000636792 CCNB3Q8WWL7 1395 aa10.4□□□□□ -0.74
UPF3B-205ENST00000636792 DCAF8Q5TAQ9 597 aa10.4□□□□□ -0.74
UPF3B-205ENST00000636792 CD109Q6YHK3 1445 aa10.4□□□□□ -0.75
UPF3B-205ENST00000636792 GPATCH8Q9UKJ3 1502 aaKnown RBP10.39□□□□□ -0.75
UPF3B-205ENST00000636792 ARID3CA6NKF2 412 aa10.39□□□□□ -0.75
UPF3B-205ENST00000636792 SNPHO15079 494 aa10.39□□□□□ -0.75
UPF3B-205ENST00000636792 ARHGAP5Q13017 1502 aa10.38□□□□□ -0.75
UPF3B-205ENST00000636792 TCOF1Q13428 1488 aaKnown RBP10.38□□□□□ -0.75
UPF3B-205ENST00000636792 TMEM121BQ9BXQ6 578 aaPredicted RBP10.38□□□□□ -0.75
UPF3B-205ENST00000636792 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.38□□□□□ -0.75
UPF3B-205ENST00000636792 ABCC1P33527 1531 aa10.38□□□□□ -0.75
UPF3B-205ENST00000636792 FANCAO15360 1455 aa10.37□□□□□ -0.75
UPF3B-205ENST00000636792 TSPOAP1O95153 1857 aa10.37□□□□□ -0.75
UPF3B-205ENST00000636792 KANK4Q5T7N3 995 aaPredicted RBP10.37□□□□□ -0.75
UPF3B-205ENST00000636792 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.37□□□□□ -0.75
UPF3B-205ENST00000636792 PTPN23Q9H3S7 1636 aa10.36□□□□□ -0.75
UPF3B-205ENST00000636792 ARHGEF5Q12774 1597 aa10.36□□□□□ -0.75
UPF3B-205ENST00000636792 SAMD9LQ8IVG5 1584 aa10.36□□□□□ -0.75
UPF3B-205ENST00000636792 FGD6Q6ZV73 1430 aa10.36□□□□□ -0.75
UPF3B-205ENST00000636792 KIAA1107Q9UPP5 1409 aa10.36□□□□□ -0.75
UPF3B-205ENST00000636792 PYGBP11216 843 aa10.36□□□□□ -0.75
UPF3B-205ENST00000636792 FAM69CQ0P6D2 419 aa10.36□□□□□ -0.75
UPF3B-205ENST00000636792 FKBP8Q14318 412 aa10.36□□□□□ -0.75
UPF3B-205ENST00000636792 RRBP1Q9P2E9 1410 aaKnown RBP10.35□□□□□ -0.75
UPF3B-205ENST00000636792 CAMSAP2Q08AD1 1489 aa10.35□□□□□ -0.75
UPF3B-205ENST00000636792 CROCC2H7BZ55 1655 aa10.34□□□□□ -0.75
UPF3B-205ENST00000636792 KCNH8Q96L42 1107 aa10.34□□□□□ -0.75
UPF3B-205ENST00000636792 RICTORQ6R327 1708 aa10.33□□□□□ -0.76
UPF3B-205ENST00000636792 EFCAB2Q5VUJ9 269 aa10.33□□□□□ -0.76
UPF3B-205ENST00000636792 KDM5CP41229 1560 aa10.33□□□□□ -0.76
UPF3B-205ENST00000636792 DNMT1P26358 1616 aaKnown RBP10.33□□□□□ -0.76
UPF3B-205ENST00000636792 ZMYM4Q5VZL5 1548 aa10.33□□□□□ -0.76
UPF3B-205ENST00000636792 MAST1Q9Y2H9 1570 aa10.32□□□□□ -0.76
UPF3B-205ENST00000636792 ADGRL1O94910 1474 aa10.32□□□□□ -0.76
UPF3B-205ENST00000636792 ZNF518AQ6AHZ1 1483 aa10.32□□□□□ -0.76
UPF3B-205ENST00000636792 SHANK2Q9UPX8 1470 aa10.32□□□□□ -0.76
UPF3B-205ENST00000636792 PCDHB8Q9UN66 801 aa10.32□□□□□ -0.76
UPF3B-205ENST00000636792 AKNAQ7Z591 1439 aa10.32□□□□□ -0.76
UPF3B-205ENST00000636792 RSPH4AQ5TD94 716 aa10.31□□□□□ -0.76
UPF3B-205ENST00000636792 CFDP1Q9UEE9 299 aaPredicted RBP10.31□□□□□ -0.76
UPF3B-205ENST00000636792 FBXO3Q9UK99 471 aa10.31□□□□□ -0.76
UPF3B-205ENST00000636792 SYCP2Q9BX26 1530 aa10.31□□□□□ -0.76
UPF3B-205ENST00000636792 CCDC141Q6ZP82 1450 aa10.3□□□□□ -0.76
UPF3B-205ENST00000636792 KDM6BO15054 1643 aa10.3□□□□□ -0.76
UPF3B-205ENST00000636792 ADGBQ8N7X0 1667 aa10.3□□□□□ -0.76
UPF3B-205ENST00000636792 POGZQ7Z3K3 1410 aa10.3□□□□□ -0.76
UPF3B-205ENST00000636792 DENND4BO75064 1496 aaPredicted RBP10.3□□□□□ -0.76
UPF3B-205ENST00000636792 MAGI2Q86UL8 1455 aa10.3□□□□□ -0.76
UPF3B-205ENST00000636792 GOLGA2Q08379 1002 aa10.29□□□□□ -0.76
UPF3B-205ENST00000636792 FRMPD1Q5SYB0 1578 aa10.29□□□□□ -0.76
UPF3B-205ENST00000636792 HECW2Q9P2P5 1572 aa10.29□□□□□ -0.76
UPF3B-205ENST00000636792 INO80Q9ULG1 1556 aaPredicted RBP10.29□□□□□ -0.76
UPF3B-205ENST00000636792 PLXNC1O60486 1568 aa10.28□□□□□ -0.76
UPF3B-205ENST00000636792 MBD5Q9P267 1494 aa10.28□□□□□ -0.76
UPF3B-205ENST00000636792 C3orf67Q6ZVT6 689 aa10.27□□□□□ -0.77
UPF3B-205ENST00000636792 RTEL1-TNFRSF6BF6WH68 1400 aa10.26□□□□□ -0.77
UPF3B-205ENST00000636792 SCAPERQ9BY12 1400 aa10.26□□□□□ -0.77
UPF3B-205ENST00000636792 MLH3Q9UHC1 1453 aa10.26□□□□□ -0.77
UPF3B-205ENST00000636792 MMRN1Q13201 1228 aa10.26□□□□□ -0.77
UPF3B-205ENST00000636792 GSE1Q14687 1217 aa10.26□□□□□ -0.77
UPF3B-205ENST00000636792 ZNF467Q7Z7K2 595 aaPredicted RBP10.26□□□□□ -0.77
UPF3B-205ENST00000636792 ZFYVE16Q7Z3T8 1539 aa10.26□□□□□ -0.77
UPF3B-205ENST00000636792 REREQ9P2R6 1566 aa10.26□□□□□ -0.77
UPF3B-205ENST00000636792 ADGRL2O95490 1459 aa10.25□□□□□ -0.77
UPF3B-205ENST00000636792 ARHGEF40Q8TER5 1519 aa10.25□□□□□ -0.77
UPF3B-205ENST00000636792 MKRN3Q13064 507 aaKnown RBP10.25□□□□□ -0.77
UPF3B-205ENST00000636792 SPNS2Q8IVW8 549 aa10.25□□□□□ -0.77
UPF3B-205ENST00000636792 MARVELD3Q96A59 401 aa10.25□□□□□ -0.77
UPF3B-205ENST00000636792 L3MBTL3Q96JM7 780 aaPredicted RBP10.25□□□□□ -0.77
UPF3B-205ENST00000636792 DAPK1P53355 1430 aa10.24□□□□□ -0.77
UPF3B-205ENST00000636792 ATP7AQ04656 1500 aa10.24□□□□□ -0.77
UPF3B-205ENST00000636792 ARHGEF12Q9NZN5 1544 aa10.24□□□□□ -0.77
UPF3B-205ENST00000636792 KIDINS220Q9ULH0 1771 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms