RNA–Protein interactions for RNA: ENST00000636758.1

SMARCA2-253, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 100 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-253ENST00000636758 HOXB1P14653 301 aaPredicted RBP4.82□□□□□ -1.64
SMARCA2-253ENST00000636758 FECHP22830 423 aa4.82□□□□□ -1.64
SMARCA2-253ENST00000636758 BARGINQ6ZT62 677 aa4.82□□□□□ -1.64
SMARCA2-253ENST00000636758 FBXW7Q969H0 707 aa4.82□□□□□ -1.64
SMARCA2-253ENST00000636758 ADAM33Q9BZ11 813 aa4.82□□□□□ -1.64
SMARCA2-253ENST00000636758 POTEB3A0JP26 581 aa4.81□□□□□ -1.64
SMARCA2-253ENST00000636758 EMP3P54852 163 aa4.81□□□□□ -1.64
SMARCA2-253ENST00000636758 PTGDRQ13258 359 aa4.81□□□□□ -1.64
SMARCA2-253ENST00000636758 PPP4R3BQ5MIZ7 849 aa4.81□□□□□ -1.64
SMARCA2-253ENST00000636758 C6orf132Q5T0Z8 1188 aa4.81□□□□□ -1.64
SMARCA2-253ENST00000636758 POTEBQ6S5H4 581 aa4.81□□□□□ -1.64
SMARCA2-253ENST00000636758 ERBB3P21860 1342 aa4.8□□□□□ -1.64
SMARCA2-253ENST00000636758 GNPATO15228 680 aa4.8□□□□□ -1.64
SMARCA2-253ENST00000636758 HIC1Q14526 733 aa4.8□□□□□ -1.64
SMARCA2-253ENST00000636758 NEUROD2Q15784 382 aa4.79□□□□□ -1.64
SMARCA2-253ENST00000636758 VARS2Q5ST30 1063 aaKnown RBP4.79□□□□□ -1.64
SMARCA2-253ENST00000636758 NPDC1Q9NQX5 325 aaPredicted RBP4.79□□□□□ -1.64
SMARCA2-253ENST00000636758 PSDA5PKW4 1024 aaPredicted RBP4.78□□□□□ -1.64
SMARCA2-253ENST00000636758 FAM205CA6NFA0 338 aa4.78□□□□□ -1.64
SMARCA2-253ENST00000636758 FAM161AQ3B820 660 aa4.78□□□□□ -1.64
SMARCA2-253ENST00000636758 CCDC102AQ96A19 550 aa4.78□□□□□ -1.64
SMARCA2-253ENST00000636758 AK7Q96M32 723 aa4.78□□□□□ -1.64
SMARCA2-253ENST00000636758 HS3ST6Q96QI5 342 aa4.78□□□□□ -1.64
SMARCA2-253ENST00000636758 IRF6O14896 467 aa4.77□□□□□ -1.65
SMARCA2-253ENST00000636758 COL9A1P20849 921 aa4.77□□□□□ -1.65
SMARCA2-253ENST00000636758 PTPREP23469 700 aa4.77□□□□□ -1.65
SMARCA2-253ENST00000636758 MAP2K5Q13163 448 aa4.77□□□□□ -1.65
SMARCA2-253ENST00000636758 PADI6Q6TGC4 694 aa4.77□□□□□ -1.65
SMARCA2-253ENST00000636758 KCNK17Q96T54 332 aa4.77□□□□□ -1.65
SMARCA2-253ENST00000636758 BCL2L12Q9HB09 334 aa4.77□□□□□ -1.65
SMARCA2-253ENST00000636758 MINK1Q8N4C8 1332 aaPredicted RBP4.76□□□□□ -1.65
SMARCA2-253ENST00000636758 TRIM66O15016 1216 aa4.76□□□□□ -1.65
SMARCA2-253ENST00000636758 BRPF1P55201 1214 aaPredicted RBP4.76□□□□□ -1.65
SMARCA2-253ENST00000636758 AXIN2Q9Y2T1 843 aa4.76□□□□□ -1.65
SMARCA2-253ENST00000636758 PSEN2P49810 448 aa4.75□□□□□ -1.65
SMARCA2-253ENST00000636758 CERKQ8TCT0 537 aa4.75□□□□□ -1.65
SMARCA2-253ENST00000636758 CDCA7LQ96GN5 454 aa4.75□□□□□ -1.65
SMARCA2-253ENST00000636758 KCNH8Q96L42 1107 aa4.75□□□□□ -1.65
SMARCA2-253ENST00000636758 KRTAP3-3Q9BYR6 98 aa4.75□□□□□ -1.65
SMARCA2-253ENST00000636758 KRTAP3-2Q9BYR7 98 aa4.75□□□□□ -1.65
SMARCA2-253ENST00000636758 GPBP1L1Q9HC44 474 aaPredicted RBP4.75□□□□□ -1.65
SMARCA2-253ENST00000636758 PPP1R3GB7ZBB8 358 aa4.74□□□□□ -1.65
SMARCA2-253ENST00000636758 PRSS12P56730 875 aa4.74□□□□□ -1.65
SMARCA2-253ENST00000636758 PDE4DQ08499 809 aa4.74□□□□□ -1.65
SMARCA2-253ENST00000636758 TTLL12Q14166 644 aaPredicted RBP4.74□□□□□ -1.65
SMARCA2-253ENST00000636758 PROX2Q3B8N5 592 aa4.74□□□□□ -1.65
SMARCA2-253ENST00000636758 SPNS2Q8IVW8 549 aa4.74□□□□□ -1.65
SMARCA2-253ENST00000636758 NLRP7Q8WX94 980 aa4.74□□□□□ -1.65
SMARCA2-253ENST00000636758 MMRN1Q13201 1228 aa4.72□□□□□ -1.65
SMARCA2-253ENST00000636758 POTEEQ6S8J3 1075 aa4.72□□□□□ -1.65
SMARCA2-253ENST00000636758 PHOX2BQ99453 314 aa4.72□□□□□ -1.65
SMARCA2-253ENST00000636758 FAM198AQ9UFP1 575 aa4.72□□□□□ -1.65
SMARCA2-253ENST00000636758 TSKSQ9UJT2 592 aa4.72□□□□□ -1.65
SMARCA2-253ENST00000636758 ADGRG1Q9Y653 693 aa4.72□□□□□ -1.65
SMARCA2-253ENST00000636758 TRIM6-TRIM34B2RNG4 842 aa4.71□□□□□ -1.66
SMARCA2-253ENST00000636758 SMAPO00193 183 aa4.71□□□□□ -1.66
SMARCA2-253ENST00000636758 ARHGAP33O14559 1287 aa4.71□□□□□ -1.66
SMARCA2-253ENST00000636758 MDM2Q00987 491 aaPredicted RBP4.71□□□□□ -1.66
SMARCA2-253ENST00000636758 DMRTA1Q5VZB9 504 aa4.71□□□□□ -1.66
SMARCA2-253ENST00000636758 NUDT18Q6ZVK8 323 aa4.71□□□□□ -1.66
SMARCA2-253ENST00000636758 METTL3Q86U44 580 aaKnown RBP4.71□□□□□ -1.66
SMARCA2-253ENST00000636758 ZNF687Q8N1G0 1237 aa4.71□□□□□ -1.66
SMARCA2-253ENST00000636758 KDM4CQ9H3R0 1056 aa4.71□□□□□ -1.66
SMARCA2-253ENST00000636758 C3orf80F5H4A9 247 aa4.7□□□□□ -1.66
SMARCA2-253ENST00000636758 OATP04181 439 aa4.7□□□□□ -1.66
SMARCA2-253ENST00000636758 PACS2Q86VP3 889 aa4.7□□□□□ -1.66
SMARCA2-253ENST00000636758 PARP9Q8IXQ6 854 aa4.7□□□□□ -1.66
SMARCA2-253ENST00000636758 TTC13Q8NBP0 860 aa4.7□□□□□ -1.66
SMARCA2-253ENST00000636758 IL27Q8NEV9 243 aa4.7□□□□□ -1.66
SMARCA2-253ENST00000636758 RBM46Q8TBY0 533 aaKnown RBP4.7□□□□□ -1.66
SMARCA2-253ENST00000636758 REPIN1Q9BWE0 567 aaKnown RBP4.7□□□□□ -1.66
SMARCA2-253ENST00000636758 KIAA1468Q9P260 1216 aa4.7□□□□□ -1.66
SMARCA2-253ENST00000636758 RBM27Q9P2N5 1060 aaKnown RBP4.7□□□□□ -1.66
SMARCA2-253ENST00000636758 PNMA3Q9UL41 463 aa4.7□□□□□ -1.66
SMARCA2-253ENST00000636758 AMHR2Q16671 573 aa4.69□□□□□ -1.66
SMARCA2-253ENST00000636758 GIGYF2Q6Y7W6 1299 aaKnown RBP4.69□□□□□ -1.66
SMARCA2-253ENST00000636758 PXYLP1Q8TE99 480 aa4.69□□□□□ -1.66
SMARCA2-253ENST00000636758 TATDN2Q93075 761 aa4.69□□□□□ -1.66
SMARCA2-253ENST00000636758 ZBED2Q9BTP6 218 aa4.69□□□□□ -1.66
SMARCA2-253ENST00000636758 NBPF26B4DH59 902 aa4.68□□□□□ -1.66
SMARCA2-253ENST00000636758 FAM117AQ9C073 453 aa4.68□□□□□ -1.66
SMARCA2-253ENST00000636758 SEPT9Q9UHD8 586 aaPredicted RBP4.68□□□□□ -1.66
SMARCA2-253ENST00000636758 RCCD1A6NED2 376 aa4.67□□□□□ -1.66
SMARCA2-253ENST00000636758 MS4A1P11836 297 aa4.67□□□□□ -1.66
SMARCA2-253ENST00000636758 CLCN1P35523 988 aa4.67□□□□□ -1.66
SMARCA2-253ENST00000636758 PBX2P40425 430 aa4.67□□□□□ -1.66
SMARCA2-253ENST00000636758 ANKRD13DQ6ZTN6 518 aa4.67□□□□□ -1.66
SMARCA2-253ENST00000636758 GPCPD1Q9NPB8 672 aa4.67□□□□□ -1.66
SMARCA2-253ENST00000636758 VPS9D1Q9Y2B5 631 aa4.67□□□□□ -1.66
SMARCA2-253ENST00000636758 TMEM132AQ24JP5 1023 aa4.66□□□□□ -1.66
SMARCA2-253ENST00000636758 EYA1Q99502 592 aa4.66□□□□□ -1.66
SMARCA2-253ENST00000636758 RABGEF1Q9UJ41 708 aa4.66□□□□□ -1.66
SMARCA2-253ENST00000636758 SSTR3P32745 418 aaPredicted RBP4.65□□□□□ -1.67
SMARCA2-253ENST00000636758 LSM11P83369 360 aaKnown RBP eCLIP4.65□□□□□ -1.67
SMARCA2-253ENST00000636758 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP4.64□□□□□ -1.67
SMARCA2-253ENST00000636758 DDX11L8A8MPP1 907 aa4.64□□□□□ -1.67
SMARCA2-253ENST00000636758 ONECUT3O60422 494 aaPredicted RBP4.64□□□□□ -1.67
SMARCA2-253ENST00000636758 RNF40O75150 1001 aa4.64□□□□□ -1.67
SMARCA2-253ENST00000636758 DNAJB2P25686 324 aa4.64□□□□□ -1.67
SMARCA2-253ENST00000636758 ADGRD1Q6QNK2 874 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms