RNA–Protein interactions for RNA: ENST00000636602.1

CLN5-212, Transcript of CLN5, intracellular trafficking protein, humanhuman

TSL 3

Gene CLN5, Length 661 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-212ENST00000636602 DNAJC5Q9H3Z4 198 aa11.11□□□□□ -0.63
CLN5-212ENST00000636602 RYDENQ9NUL5 291 aaKnown RBP11.11□□□□□ -0.63
CLN5-212ENST00000636602 ZFRQ96KR1 1074 aaKnown RBP11.1□□□□□ -0.63
CLN5-212ENST00000636602 WBP1LQ9NX94 342 aa11.1□□□□□ -0.63
CLN5-212ENST00000636602 LCE2BO14633 110 aa11.09□□□□□ -0.63
CLN5-212ENST00000636602 KIAA1468Q9P260 1216 aa11.08□□□□□ -0.64
CLN5-212ENST00000636602 TRAF7Q6Q0C0 670 aa11.05□□□□□ -0.64
CLN5-212ENST00000636602 FBXW7Q969H0 707 aa11.05□□□□□ -0.64
CLN5-212ENST00000636602 DDX27Q96GQ7 796 aaKnown RBP11.05□□□□□ -0.64
CLN5-212ENST00000636602 LARP6Q9BRS8 491 aaKnown RBP11.05□□□□□ -0.64
CLN5-212ENST00000636602 ONECUT3O60422 494 aaPredicted RBP11.04□□□□□ -0.64
CLN5-212ENST00000636602 GFRA3O60609 400 aa11.04□□□□□ -0.64
CLN5-212ENST00000636602 TYW1BQ6NUM6 668 aa11.04□□□□□ -0.64
CLN5-212ENST00000636602 EMILIN3Q9NT22 766 aa11.03□□□□□ -0.64
CLN5-212ENST00000636602 PHF14O94880 888 aa11.02□□□□□ -0.65
CLN5-212ENST00000636602 SEPT9Q9UHD8 586 aaPredicted RBP11.02□□□□□ -0.65
CLN5-212ENST00000636602 MFSD10Q14728 455 aa11□□□□□ -0.65
CLN5-212ENST00000636602 TSR3Q9UJK0 312 aaKnown RBP11□□□□□ -0.65
CLN5-212ENST00000636602 AMER1Q5JTC6 1135 aaPredicted RBP10.99□□□□□ -0.65
CLN5-212ENST00000636602 RTN4Q9NQC3 1192 aaKnown RBP10.99□□□□□ -0.65
CLN5-212ENST00000636602 FAM98CQ17RN3 349 aaKnown RBP10.98□□□□□ -0.65
CLN5-212ENST00000636602 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.98□□□□□ -0.65
CLN5-212ENST00000636602 HPS5Q9UPZ3 1129 aa10.98□□□□□ -0.65
CLN5-212ENST00000636602 C6orf132Q5T0Z8 1188 aa10.97□□□□□ -0.65
CLN5-212ENST00000636602 TRIM6-TRIM34B2RNG4 842 aa10.96□□□□□ -0.65
CLN5-212ENST00000636602 LRCH3Q96II8 777 aa10.96□□□□□ -0.65
CLN5-212ENST00000636602 NRG2O14511 850 aaPredicted RBP10.93□□□□□ -0.66
CLN5-212ENST00000636602 EPAS1Q99814 870 aa10.93□□□□□ -0.66
CLN5-212ENST00000636602 PRKD2Q9BZL6 878 aa10.92□□□□□ -0.66
CLN5-212ENST00000636602 GTPBP6O43824 516 aaPredicted RBP10.9□□□□□ -0.66
CLN5-212ENST00000636602 TJAP1Q5JTD0 557 aa10.89□□□□□ -0.67
CLN5-212ENST00000636602 PPP4CP60510 307 aa10.88□□□□□ -0.67
CLN5-212ENST00000636602 V9GY48 417 aaPredicted RBP10.86□□□□□ -0.67
CLN5-212ENST00000636602 ZNF787Q6DD87 383 aa10.85□□□□□ -0.67
CLN5-212ENST00000636602 RBM33Q96EV2 1170 aaKnown RBP10.85□□□□□ -0.67
CLN5-212ENST00000636602 PPP1R18Q6NYC8 613 aa10.84□□□□□ -0.67
CLN5-212ENST00000636602 PACS2Q86VP3 889 aa10.83□□□□□ -0.68
CLN5-212ENST00000636602 TSKSQ9UJT2 592 aa10.83□□□□□ -0.68
CLN5-212ENST00000636602 MTRQ99707 1265 aa10.81□□□□□ -0.68
CLN5-212ENST00000636602 IL21Q9HBE4 155 aa10.81□□□□□ -0.68
CLN5-212ENST00000636602 DPYSL4O14531 572 aa10.8□□□□□ -0.68
CLN5-212ENST00000636602 CAMK2BQ13554 666 aa10.8□□□□□ -0.68
CLN5-212ENST00000636602 SAMD7Q7Z3H4 446 aa10.79□□□□□ -0.68
CLN5-212ENST00000636602 CADPS2Q86UW7 1296 aa10.79□□□□□ -0.68
CLN5-212ENST00000636602 DDX12PQ92771 950 aa10.78□□□□□ -0.68
CLN5-212ENST00000636602 ZNF775Q96BV0 537 aaPredicted RBP10.78□□□□□ -0.68
CLN5-212ENST00000636602 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.78□□□□□ -0.68
CLN5-212ENST00000636602 PDZRN3Q9UPQ7 1066 aa10.78□□□□□ -0.68
CLN5-212ENST00000636602 SLC24A1O60721 1099 aa10.77□□□□□ -0.69
CLN5-212ENST00000636602 EN1Q05925 392 aaPredicted RBP10.76□□□□□ -0.69
CLN5-212ENST00000636602 TSR1Q2NL82 804 aaKnown RBP10.76□□□□□ -0.69
CLN5-212ENST00000636602 SMAPO00193 183 aa10.75□□□□□ -0.69
CLN5-212ENST00000636602 ZNF516Q92618 1163 aa10.75□□□□□ -0.69
CLN5-212ENST00000636602 MAP3K7O43318 606 aa10.72□□□□□ -0.69
CLN5-212ENST00000636602 NBR1Q14596 966 aa10.72□□□□□ -0.69
CLN5-212ENST00000636602 CDCA7LQ96GN5 454 aa10.72□□□□□ -0.69
CLN5-212ENST00000636602 PRSS12P56730 875 aa10.7□□□□□ -0.7
CLN5-212ENST00000636602 FAM198AQ9UFP1 575 aa10.7□□□□□ -0.7
CLN5-212ENST00000636602 NKX2-3Q8TAU0 364 aa10.69□□□□□ -0.7
CLN5-212ENST00000636602 C3orf80F5H4A9 247 aa10.68□□□□□ -0.7
CLN5-212ENST00000636602 TATDN2Q93075 761 aa10.68□□□□□ -0.7
CLN5-212ENST00000636602 APLP1P51693 650 aa10.67□□□□□ -0.7
CLN5-212ENST00000636602 GGCXP38435 758 aa10.66□□□□□ -0.7
CLN5-212ENST00000636602 PNMA3Q9UL41 463 aa10.66□□□□□ -0.7
CLN5-212ENST00000636602 NBPF26B4DH59 902 aa10.65□□□□□ -0.7
CLN5-212ENST00000636602 RNF40O75150 1001 aa10.64□□□□□ -0.71
CLN5-212ENST00000636602 CERKQ8TCT0 537 aa10.64□□□□□ -0.71
CLN5-212ENST00000636602 HDGFP51858 240 aaKnown RBP10.63□□□□□ -0.71
CLN5-212ENST00000636602 PDIA6Q15084 440 aa10.63□□□□□ -0.71
CLN5-212ENST00000636602 TMUB1Q9BVT8 246 aa10.63□□□□□ -0.71
CLN5-212ENST00000636602 TRIM67Q6ZTA4 783 aa10.61□□□□□ -0.71
CLN5-212ENST00000636602 COPS2P61201 443 aa10.6□□□□□ -0.71
CLN5-212ENST00000636602 NUDT18Q6ZVK8 323 aa10.59□□□□□ -0.71
CLN5-212ENST00000636602 SPDYE16A6NNV3 312 aaPredicted RBP10.58□□□□□ -0.72
CLN5-212ENST00000636602 PRIM1P49642 420 aaKnown RBP10.58□□□□□ -0.72
CLN5-212ENST00000636602 MYT1Q01538 1121 aa10.58□□□□□ -0.72
CLN5-212ENST00000636602 NECTIN2Q92692 538 aa10.58□□□□□ -0.72
CLN5-212ENST00000636602 PKDCCQ504Y2 493 aa10.57□□□□□ -0.72
CLN5-212ENST00000636602 POTECB2RU33 542 aa10.56□□□□□ -0.72
CLN5-212ENST00000636602 ZPR1O75312 459 aa10.56□□□□□ -0.72
CLN5-212ENST00000636602 DGAT1O75907 488 aa10.56□□□□□ -0.72
CLN5-212ENST00000636602 SLC19A1P41440 591 aa10.55□□□□□ -0.72
CLN5-212ENST00000636602 EMID1Q96A84 441 aaPredicted RBP10.54□□□□□ -0.72
CLN5-212ENST00000636602 RBM27Q9P2N5 1060 aaKnown RBP10.54□□□□□ -0.72
CLN5-212ENST00000636602 SWT1Q5T5J6 900 aaKnown RBP10.53□□□□□ -0.72
CLN5-212ENST00000636602 SLF2Q8IX21 1173 aa10.53□□□□□ -0.72
CLN5-212ENST00000636602 RNF223E7ERA6 249 aa10.52□□□□□ -0.73
CLN5-212ENST00000636602 PRR20EP86478 221 aa10.51□□□□□ -0.73
CLN5-212ENST00000636602 PRR20CP86479 221 aa10.51□□□□□ -0.73
CLN5-212ENST00000636602 PRR20DP86480 221 aa10.51□□□□□ -0.73
CLN5-212ENST00000636602 PRR20BP86481 221 aa10.51□□□□□ -0.73
CLN5-212ENST00000636602 PRR20AP86496 221 aa10.51□□□□□ -0.73
CLN5-212ENST00000636602 SPRYD7Q5W111 196 aa10.51□□□□□ -0.73
CLN5-212ENST00000636602 CDHR5Q9HBB8 845 aa10.51□□□□□ -0.73
CLN5-212ENST00000636602 GRXCR2A6NFK2 248 aa10.5□□□□□ -0.73
CLN5-212ENST00000636602 ZNF598Q86UK7 904 aaKnown RBP10.5□□□□□ -0.73
CLN5-212ENST00000636602 TREML4Q6UXN2 200 aa10.48□□□□□ -0.73
CLN5-212ENST00000636602 TTC13Q8NBP0 860 aa10.48□□□□□ -0.73
CLN5-212ENST00000636602 DCAF8L2P0C7V8 631 aa10.47□□□□□ -0.73
CLN5-212ENST00000636602 LCE2AQ5TA79 106 aaPredicted RBP10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms