RNA–Protein interactions for RNA: ENST00000636420.1

PCCA-212, Transcript of propionyl-CoA carboxylase subunit alpha, humanhuman

TSL 5

Gene PCCA, Length 1,418 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCA-212ENST00000636420 TROQ12816 1431 aaPredicted RBP11.78□□□□□ -0.52
PCCA-212ENST00000636420 CCER1Q8TC90 406 aaPredicted RBP11.78□□□□□ -0.52
PCCA-212ENST00000636420 ITSN2Q9NZM3 1697 aa11.78□□□□□ -0.52
PCCA-212ENST00000636420 MYT1LQ9UL68 1186 aa11.77□□□□□ -0.52
PCCA-212ENST00000636420 VWDEQ8N2E2 1590 aa11.77□□□□□ -0.53
PCCA-212ENST00000636420 CLTCQ00610 1675 aaKnown RBP11.76□□□□□ -0.53
PCCA-212ENST00000636420 DNMT1P26358 1616 aaKnown RBP11.76□□□□□ -0.53
PCCA-212ENST00000636420 SUPT6HQ7KZ85 1726 aaKnown RBP11.75□□□□□ -0.53
PCCA-212ENST00000636420 SAMD9LQ8IVG5 1584 aa11.75□□□□□ -0.53
PCCA-212ENST00000636420 A2ML1A8K2U0 1454 aa11.75□□□□□ -0.53
PCCA-212ENST00000636420 PREX2Q70Z35 1606 aa11.74□□□□□ -0.53
PCCA-212ENST00000636420 PLXNC1O60486 1568 aa11.74□□□□□ -0.53
PCCA-212ENST00000636420 ZNF316A6NFI3 1004 aaPredicted RBP11.74□□□□□ -0.53
PCCA-212ENST00000636420 EEA1Q15075 1411 aa11.74□□□□□ -0.53
PCCA-212ENST00000636420 ZBTB22O15209 634 aa11.73□□□□□ -0.53
PCCA-212ENST00000636420 POLR1AO95602 1720 aaPredicted RBP11.72□□□□□ -0.53
PCCA-212ENST00000636420 POTEAQ6S8J7 498 aa11.71□□□□□ -0.53
PCCA-212ENST00000636420 LRRIQ1Q96JM4 1722 aa11.71□□□□□ -0.54
PCCA-212ENST00000636420 CDK11AQ9UQ88 783 aaPredicted RBP11.7□□□□□ -0.54
PCCA-212ENST00000636420 U3KPZ7 1027 aaPredicted RBP11.69□□□□□ -0.54
PCCA-212ENST00000636420 CLIP1P30622 1438 aa11.69□□□□□ -0.54
PCCA-212ENST00000636420 LRRC7Q96NW7 1537 aa11.68□□□□□ -0.54
PCCA-212ENST00000636420 STRCP1A6NGW2 1772 aa11.68□□□□□ -0.54
PCCA-212ENST00000636420 FMN1Q68DA7 1419 aa11.68□□□□□ -0.54
PCCA-212ENST00000636420 MED14O60244 1454 aa11.68□□□□□ -0.54
PCCA-212ENST00000636420 INO80Q9ULG1 1556 aaPredicted RBP11.68□□□□□ -0.54
PCCA-212ENST00000636420 A2MP01023 1474 aa11.67□□□□□ -0.54
PCCA-212ENST00000636420 ARHGAP35Q9NRY4 1499 aa11.67□□□□□ -0.54
PCCA-212ENST00000636420 ATP7AQ04656 1500 aa11.67□□□□□ -0.54
PCCA-212ENST00000636420 SYCP2Q9BX26 1530 aa11.66□□□□□ -0.54
PCCA-212ENST00000636420 RNF17Q9BXT8 1623 aaKnown RBP11.66□□□□□ -0.54
PCCA-212ENST00000636420 CDC42BPAQ5VT25 1732 aa11.66□□□□□ -0.54
PCCA-212ENST00000636420 ATP1B4Q9UN42 357 aaPredicted RBP11.66□□□□□ -0.54
PCCA-212ENST00000636420 SPAG9O60271 1321 aaKnown RBP11.65□□□□□ -0.54
PCCA-212ENST00000636420 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.65□□□□□ -0.54
PCCA-212ENST00000636420 NPHP4O75161 1426 aaPredicted RBP11.65□□□□□ -0.54
PCCA-212ENST00000636420 FBXO31Q5XUX0 539 aaPredicted RBP11.64□□□□□ -0.55
PCCA-212ENST00000636420 GGT6Q6P531 493 aa11.64□□□□□ -0.55
PCCA-212ENST00000636420 DEPDC5O75140 1603 aa11.64□□□□□ -0.55
PCCA-212ENST00000636420 SETD1AO15047 1707 aaKnown RBP11.64□□□□□ -0.55
PCCA-212ENST00000636420 TNRQ92752 1358 aa11.63□□□□□ -0.55
PCCA-212ENST00000636420 SYNMO15061 1565 aa11.63□□□□□ -0.55
PCCA-212ENST00000636420 CEP162Q5TB80 1403 aa11.62□□□□□ -0.55
PCCA-212ENST00000636420 HNRNPMP52272 730 aaKnown RBP eCLIP11.61□□□□□ -0.552e-6■■■■□ 22
PCCA-212ENST00000636420 ANKLE2Q86XL3 938 aa11.61□□□□□ -0.55
PCCA-212ENST00000636420 PZPP20742 1482 aa11.61□□□□□ -0.55
PCCA-212ENST00000636420 GPATCH8Q9UKJ3 1502 aaKnown RBP11.6□□□□□ -0.55
PCCA-212ENST00000636420 KIAA1107Q9UPP5 1409 aa11.6□□□□□ -0.55
PCCA-212ENST00000636420 IQGAP1P46940 1657 aa11.6□□□□□ -0.55
PCCA-212ENST00000636420 SPINK5Q9NQ38 1064 aaPredicted RBP11.6□□□□□ -0.55
PCCA-212ENST00000636420 ZC3H13Q5T200 1668 aaKnown RBP11.58□□□□□ -0.56
PCCA-212ENST00000636420 ZNF777Q9ULD5 760 aaPredicted RBP11.58□□□□□ -0.56
PCCA-212ENST00000636420 XIRP1Q702N8 1843 aaKnown RBP11.58□□□□□ -0.56
PCCA-212ENST00000636420 UGGT1Q9NYU2 1555 aa11.57□□□□□ -0.56
PCCA-212ENST00000636420 NLRP1Q9C000 1473 aa11.57□□□□□ -0.56
PCCA-212ENST00000636420 THEMISQ8N1K5 641 aaPredicted RBP11.57□□□□□ -0.56
PCCA-212ENST00000636420 FAM135BQ49AJ0 1406 aa11.57□□□□□ -0.56
PCCA-212ENST00000636420 MIA2Q96PC5 1412 aa11.57□□□□□ -0.56
PCCA-212ENST00000636420 ADGBQ8N7X0 1667 aa11.56□□□□□ -0.56
PCCA-212ENST00000636420 UPF1Q92900 1129 aaKnown RBP eCLIP11.55□□□□□ -0.56
PCCA-212ENST00000636420 KDM5DQ9BY66 1539 aa11.55□□□□□ -0.56
PCCA-212ENST00000636420 CCDC18Q5T9S5 1454 aa11.55□□□□□ -0.56
PCCA-212ENST00000636420 CASKIN1Q8WXD9 1431 aa11.54□□□□□ -0.56
PCCA-212ENST00000636420 FAM135AQ9P2D6 1515 aa11.54□□□□□ -0.56
PCCA-212ENST00000636420 SLC4A2P04920 1241 aa11.54□□□□□ -0.56
PCCA-212ENST00000636420 FOXD4L1Q9NU39 408 aa11.54□□□□□ -0.56
PCCA-212ENST00000636420 PLEKHH2Q8IVE3 1493 aa11.54□□□□□ -0.56
PCCA-212ENST00000636420 DHX29Q7Z478 1369 aaKnown RBP11.53□□□□□ -0.56
PCCA-212ENST00000636420 MBD5Q9P267 1494 aa11.53□□□□□ -0.56
PCCA-212ENST00000636420 ANP32EQ9BTT0 268 aa11.52□□□□□ -0.56
PCCA-212ENST00000636420 DSG3P32926 999 aa11.52□□□□□ -0.57
PCCA-212ENST00000636420 RTEL1-TNFRSF6BF6WH68 1400 aa11.5□□□□□ -0.57
PCCA-212ENST00000636420 ZNF644Q9H582 1327 aaPredicted RBP11.49□□□□□ -0.57
PCCA-212ENST00000636420 ROBO1Q9Y6N7 1651 aa11.49□□□□□ -0.57
PCCA-212ENST00000636420 MIER1Q8N108 512 aa11.49□□□□□ -0.57
PCCA-212ENST00000636420 NCOA2Q15596 1464 aa11.49□□□□□ -0.57
PCCA-212ENST00000636420 MAP3K1Q13233 1512 aa11.48□□□□□ -0.57
PCCA-212ENST00000636420 KIF3BO15066 747 aa11.48□□□□□ -0.57
PCCA-212ENST00000636420 CFDP1Q9UEE9 299 aaPredicted RBP11.48□□□□□ -0.57
PCCA-212ENST00000636420 ARHGAP23Q9P227 1491 aa11.48□□□□□ -0.57
PCCA-212ENST00000636420 CAPN15O75808 1086 aa11.47□□□□□ -0.57
PCCA-212ENST00000636420 LTKP29376 864 aa11.47□□□□□ -0.57
PCCA-212ENST00000636420 SCAF11Q99590 1463 aaKnown RBP11.47□□□□□ -0.57
PCCA-212ENST00000636420 LRP6O75581 1613 aa11.46□□□□□ -0.57
PCCA-212ENST00000636420 UBTFP17480 764 aaKnown RBP11.46□□□□□ -0.57
PCCA-212ENST00000636420 WASHC2CQ9Y4E1 1318 aa11.46□□□□□ -0.57
PCCA-212ENST00000636420 SRCAPQ6ZRS2 3230 aa11.46□□□□□ -0.58
PCCA-212ENST00000636420 ERVK-7P63135 1459 aa11.45□□□□□ -0.58
PCCA-212ENST00000636420 UBR1Q8IWV7 1749 aa11.45□□□□□ -0.58
PCCA-212ENST00000636420 TMEM94Q12767 1356 aa11.45□□□□□ -0.58
PCCA-212ENST00000636420 FYCO1Q9BQS8 1478 aa11.45□□□□□ -0.58
PCCA-212ENST00000636420 SLIT1O75093 1534 aa11.45□□□□□ -0.58
PCCA-212ENST00000636420 SUPT16HQ9Y5B9 1047 aaKnown RBP11.44□□□□□ -0.58
PCCA-212ENST00000636420 CCNB3Q8WWL7 1395 aa11.44□□□□□ -0.58
PCCA-212ENST00000636420 ABCC3O15438 1527 aa11.44□□□□□ -0.58
PCCA-212ENST00000636420 TIAM1Q13009 1591 aa11.43□□□□□ -0.58
PCCA-212ENST00000636420 JCADQ9P266 1359 aa11.42□□□□□ -0.58
PCCA-212ENST00000636420 LRRC9Q6ZRR7 1453 aa11.42□□□□□ -0.58
PCCA-212ENST00000636420 COL16A1Q07092 1604 aaPredicted RBP11.41□□□□□ -0.58
PCCA-212ENST00000636420 TRIM52Q96A61 297 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms