RNA–Protein interactions for RNA: ENST00000636405.1

CLN5-209, Transcript of CLN5, intracellular trafficking protein, humanhuman

Gene CLN5, Length 2,511 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-209ENST00000636405 MYT1LQ9UL68 1186 aa20.69■□□□□ 0.9
CLN5-209ENST00000636405 UHRF1BP1Q6BDS2 1440 aa20.69■□□□□ 0.9
CLN5-209ENST00000636405 SPAG9O60271 1321 aaKnown RBP20.69■□□□□ 0.9
CLN5-209ENST00000636405 MRS2Q9HD23 443 aa20.69■□□□□ 0.9
CLN5-209ENST00000636405 NBPF1Q3BBV0 1214 aa20.68■□□□□ 0.9
CLN5-209ENST00000636405 RALGAPBQ86X10 1494 aa20.66■□□□□ 0.9
CLN5-209ENST00000636405 ABCC1P33527 1531 aa20.66■□□□□ 0.9
CLN5-209ENST00000636405 KDM5CP41229 1560 aa20.66■□□□□ 0.9
CLN5-209ENST00000636405 ROCK2O75116 1388 aaKnown RBP20.65■□□□□ 0.9
CLN5-209ENST00000636405 DUOX2Q9NRD8 1548 aa20.65■□□□□ 0.9
CLN5-209ENST00000636405 UNC13BO14795 1591 aa20.64■□□□□ 0.89
CLN5-209ENST00000636405 PLXNC1O60486 1568 aa20.64■□□□□ 0.89
CLN5-209ENST00000636405 WDR7Q9Y4E6 1490 aa20.63■□□□□ 0.89
CLN5-209ENST00000636405 PELP1Q8IZL8 1130 aaKnown RBP20.62■□□□□ 0.89
CLN5-209ENST00000636405 SENP3-EIF4A1A0A087X0R7 540 aa20.61■□□□□ 0.89
CLN5-209ENST00000636405 DHX29Q7Z478 1369 aaKnown RBP20.61■□□□□ 0.89
CLN5-209ENST00000636405 OSCARQ8IYS5 282 aa20.61■□□□□ 0.89
CLN5-209ENST00000636405 ERBINQ96RT1 1412 aa20.6■□□□□ 0.89
CLN5-209ENST00000636405 FANCAO15360 1455 aa20.58■□□□□ 0.89
CLN5-209ENST00000636405 A2MP01023 1474 aa20.58■□□□□ 0.89
CLN5-209ENST00000636405 ASXL2Q76L83 1435 aa20.58■□□□□ 0.89
CLN5-209ENST00000636405 PRAG1Q86YV5 1406 aa20.58■□□□□ 0.88
CLN5-209ENST00000636405 IQGAP3Q86VI3 1631 aa20.57■□□□□ 0.88
CLN5-209ENST00000636405 SCAPERQ9BY12 1400 aa20.57■□□□□ 0.88
CLN5-209ENST00000636405 POLR1AO95602 1720 aaPredicted RBP20.56■□□□□ 0.88
CLN5-209ENST00000636405 KIF3BO15066 747 aa20.56■□□□□ 0.88
CLN5-209ENST00000636405 IRX6P78412 446 aaPredicted RBP20.55■□□□□ 0.88
CLN5-209ENST00000636405 NEFLP07196 543 aa20.54■□□□□ 0.88
CLN5-209ENST00000636405 ZFYVE16Q7Z3T8 1539 aa20.53■□□□□ 0.88
CLN5-209ENST00000636405 MAGI2Q86UL8 1455 aa20.53■□□□□ 0.88
CLN5-209ENST00000636405 NPM1P06748 294 aaKnown RBP eCLIP20.52■□□□□ 0.88
CLN5-209ENST00000636405 ADGRL1O94910 1474 aa20.51■□□□□ 0.87
CLN5-209ENST00000636405 ARID4BQ4LE39 1312 aaPredicted RBP20.5■□□□□ 0.87
CLN5-209ENST00000636405 RTEL1-TNFRSF6BF6WH68 1400 aa20.49■□□□□ 0.87
CLN5-209ENST00000636405 TRPM1Q7Z4N2 1603 aa20.48■□□□□ 0.87
CLN5-209ENST00000636405 ABCA9Q8IUA7 1624 aa20.47■□□□□ 0.87
CLN5-209ENST00000636405 ARAP3Q8WWN8 1544 aa20.47■□□□□ 0.87
CLN5-209ENST00000636405 ATP7AQ04656 1500 aa20.46■□□□□ 0.87
CLN5-209ENST00000636405 ATP10AO60312 1499 aa20.45■□□□□ 0.86
CLN5-209ENST00000636405 E9PCH4 1651 aa20.44■□□□□ 0.86
CLN5-209ENST00000636405 TESK2Q96S53 571 aa20.44■□□□□ 0.86
CLN5-209ENST00000636405 DISP3Q9P2K9 1392 aa20.43■□□□□ 0.86
CLN5-209ENST00000636405 TMC1Q8TDI8 760 aa20.42■□□□□ 0.86
CLN5-209ENST00000636405 GPRASP1Q5JY77 1395 aa20.41■□□□□ 0.86
CLN5-209ENST00000636405 INO80Q9ULG1 1556 aaPredicted RBP20.4■□□□□ 0.86
CLN5-209ENST00000636405 KANK1Q14678 1352 aa20.4■□□□□ 0.86
CLN5-209ENST00000636405 ZBED9Q6R2W3 1325 aa20.39■□□□□ 0.86
CLN5-209ENST00000636405 CD109Q6YHK3 1445 aa20.38■□□□□ 0.85
CLN5-209ENST00000636405 PNISRQ8TF01 805 aaKnown RBP20.37■□□□□ 0.85
CLN5-209ENST00000636405 TSHZ2Q9NRE2 1034 aa20.37■□□□□ 0.85
CLN5-209ENST00000636405 CC2D1BQ5T0F9 858 aaKnown RBP20.36■□□□□ 0.85
CLN5-209ENST00000636405 GGT6Q6P531 493 aa20.36■□□□□ 0.85
CLN5-209ENST00000636405 UGGT1Q9NYU2 1555 aa20.36■□□□□ 0.85
CLN5-209ENST00000636405 RAPGEF3O95398 923 aa20.35■□□□□ 0.85
CLN5-209ENST00000636405 PANK3Q9H999 370 aa20.35■□□□□ 0.85
CLN5-209ENST00000636405 PTPRTO14522 1441 aa20.35■□□□□ 0.85
CLN5-209ENST00000636405 PRDM15P57071 1507 aaPredicted RBP20.35■□□□□ 0.85
CLN5-209ENST00000636405 CLTCL1P53675 1640 aa20.35■□□□□ 0.85
CLN5-209ENST00000636405 PER1O15534 1290 aaPredicted RBP20.34■□□□□ 0.85
CLN5-209ENST00000636405 TRPM2O94759 1503 aa20.34■□□□□ 0.85
CLN5-209ENST00000636405 TMF1P82094 1093 aa20.33■□□□□ 0.84
CLN5-209ENST00000636405 DEPDC5O75140 1603 aa20.33■□□□□ 0.84
CLN5-209ENST00000636405 CHGAP10645 457 aaKnown RBP20.32■□□□□ 0.84
CLN5-209ENST00000636405 MYBBP1AQ9BQG0 1328 aaKnown RBP20.32■□□□□ 0.84
CLN5-209ENST00000636405 KIDINS220Q9ULH0 1771 aa20.32■□□□□ 0.84
CLN5-209ENST00000636405 COL17A1Q9UMD9 1497 aaPredicted RBP20.31■□□□□ 0.84
CLN5-209ENST00000636405 SPHKAPQ2M3C7 1700 aa20.31■□□□□ 0.84
CLN5-209ENST00000636405 RALBP1Q15311 655 aa20.3■□□□□ 0.84
CLN5-209ENST00000636405 SALL2Q9Y467 1007 aaPredicted RBP20.3■□□□□ 0.84
CLN5-209ENST00000636405 MROH1Q8NDA8 1641 aa20.3■□□□□ 0.84
CLN5-209ENST00000636405 ZNF518AQ6AHZ1 1483 aa20.3■□□□□ 0.84
CLN5-209ENST00000636405 CFAP70Q5T0N1 1121 aa20.3■□□□□ 0.84
CLN5-209ENST00000636405 CYB5RLQ6IPT4 315 aa20.3■□□□□ 0.84
CLN5-209ENST00000636405 TET3O43151 1660 aa20.3■□□□□ 0.84
CLN5-209ENST00000636405 EIF2AK4Q9P2K8 1649 aaKnown RBP20.29■□□□□ 0.84
CLN5-209ENST00000636405 VWDEQ8N2E2 1590 aa20.29■□□□□ 0.84
CLN5-209ENST00000636405 ADGRF5Q8IZF2 1346 aa20.29■□□□□ 0.84
CLN5-209ENST00000636405 KTN1Q86UP2 1357 aaKnown RBP20.28■□□□□ 0.84
CLN5-209ENST00000636405 MADDQ8WXG6 1647 aa20.28■□□□□ 0.84
CLN5-209ENST00000636405 POGZQ7Z3K3 1410 aa20.25■□□□□ 0.83
CLN5-209ENST00000636405 LAMC1P11047 1609 aa20.25■□□□□ 0.83
CLN5-209ENST00000636405 CEP152O94986 1710 aa20.24■□□□□ 0.83
CLN5-209ENST00000636405 BRD4O60885 1362 aaPredicted RBP20.24■□□□□ 0.83
CLN5-209ENST00000636405 PARD3Q8TEW0 1356 aa20.24■□□□□ 0.83
CLN5-209ENST00000636405 SENP3Q9H4L4 574 aaPredicted RBP20.23■□□□□ 0.83
CLN5-209ENST00000636405 CFAP65Q6ZU64 1925 aaKnown RBP20.22■□□□□ 0.83
CLN5-209ENST00000636405 NLRP13Q86W25 1043 aa20.22■□□□□ 0.83
CLN5-209ENST00000636405 RNF17Q9BXT8 1623 aaKnown RBP20.22■□□□□ 0.83
CLN5-209ENST00000636405 WASHC2CQ9Y4E1 1318 aa20.21■□□□□ 0.83
CLN5-209ENST00000636405 NUTM2DQ5VT03 806 aaPredicted RBP20.21■□□□□ 0.83
CLN5-209ENST00000636405 PPRC1Q5VV67 1664 aaKnown RBP20.21■□□□□ 0.83
CLN5-209ENST00000636405 LRPPRCP42704 1394 aaKnown RBP20.2■□□□□ 0.82
CLN5-209ENST00000636405 EFCAB6Q5THR3 1501 aa20.2■□□□□ 0.82
CLN5-209ENST00000636405 FRMPD1Q5SYB0 1578 aa20.19■□□□□ 0.82
CLN5-209ENST00000636405 SCAF11Q99590 1463 aaKnown RBP20.19■□□□□ 0.82
CLN5-209ENST00000636405 NUDCQ9Y266 331 aa20.19■□□□□ 0.82
CLN5-209ENST00000636405 NPATQ14207 1427 aa20.18■□□□□ 0.82
CLN5-209ENST00000636405 MLH3Q9UHC1 1453 aa20.17■□□□□ 0.82
CLN5-209ENST00000636405 B4GALNT3Q6L9W6 998 aa20.16■□□□□ 0.82
CLN5-209ENST00000636405 SMG6Q86US8 1419 aaKnown RBP20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms