RNA–Protein interactions for RNA: ENST00000636233.1

SMARCA2-249, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 100 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-249ENST00000636233 ZDHHC16Q969W1 377 aa2.63□□□□□ -1.99
SMARCA2-249ENST00000636233 KCNH8Q96L42 1107 aa2.63□□□□□ -1.99
SMARCA2-249ENST00000636233 PCDHGA10Q9Y5H3 936 aa2.63□□□□□ -1.99
SMARCA2-249ENST00000636233 KDM4FA0A1W2PPD8 638 aa2.62□□□□□ -1.99
SMARCA2-249ENST00000636233 MAP3K7O43318 606 aa2.62□□□□□ -1.99
SMARCA2-249ENST00000636233 ZMYND10O75800 440 aa2.62□□□□□ -1.99
SMARCA2-249ENST00000636233 PRKCSHP14314 528 aaPredicted RBP2.62□□□□□ -1.99
SMARCA2-249ENST00000636233 FOSBP53539 338 aa2.62□□□□□ -1.99
SMARCA2-249ENST00000636233 HIC1Q14526 733 aa2.62□□□□□ -1.99
SMARCA2-249ENST00000636233 KRI1Q8N9T8 703 aaKnown RBP2.62□□□□□ -1.99
SMARCA2-249ENST00000636233 LHX6Q9UPM6 363 aa2.62□□□□□ -1.99
SMARCA2-249ENST00000636233 GNPATO15228 680 aa2.61□□□□□ -1.99
SMARCA2-249ENST00000636233 PTPREP23469 700 aa2.61□□□□□ -1.99
SMARCA2-249ENST00000636233 PTGDRQ13258 359 aa2.61□□□□□ -1.99
SMARCA2-249ENST00000636233 C6orf132Q5T0Z8 1188 aa2.61□□□□□ -1.99
SMARCA2-249ENST00000636233 BARGINQ6ZT62 677 aa2.61□□□□□ -1.99
SMARCA2-249ENST00000636233 KHSRPQ92945 711 aaKnown RBP eCLIP2.61□□□□□ -1.99
SMARCA2-249ENST00000636233 RBM33Q96EV2 1170 aaKnown RBP2.61□□□□□ -1.99
SMARCA2-249ENST00000636233 PLA2G2EQ9NZK7 142 aa2.61□□□□□ -1.99
SMARCA2-249ENST00000636233 ERBB3P21860 1342 aa2.61□□□□□ -1.99
SMARCA2-249ENST00000636233 MINK1Q8N4C8 1332 aaPredicted RBP2.61□□□□□ -1.99
SMARCA2-249ENST00000636233 AK7Q96M32 723 aa2.6□□□□□ -1.99
SMARCA2-249ENST00000636233 BCL2L12Q9HB09 334 aa2.6□□□□□ -1.99
SMARCA2-249ENST00000636233 RBM27Q9P2N5 1060 aaKnown RBP2.6□□□□□ -1.99
SMARCA2-249ENST00000636233 DAXXQ9UER7 740 aaPredicted RBP2.6□□□□□ -1.99
SMARCA2-249ENST00000636233 PPP1R3GB7ZBB8 358 aa2.59□□□□□ -1.99
SMARCA2-249ENST00000636233 PBX2P40425 430 aa2.59□□□□□ -1.99
SMARCA2-249ENST00000636233 MAP2K5Q13163 448 aa2.59□□□□□ -1.99
SMARCA2-249ENST00000636233 ADAM33Q9BZ11 813 aa2.59□□□□□ -1.99
SMARCA2-249ENST00000636233 SLC24A3Q9HC58 644 aa2.59□□□□□ -1.99
SMARCA2-249ENST00000636233 ARHGAP33O14559 1287 aa2.58□□□□□ -2
SMARCA2-249ENST00000636233 IRF6O14896 467 aa2.58□□□□□ -2
SMARCA2-249ENST00000636233 GPR37O15354 613 aa2.58□□□□□ -2
SMARCA2-249ENST00000636233 ONECUT3O60422 494 aaPredicted RBP2.58□□□□□ -2
SMARCA2-249ENST00000636233 OATP04181 439 aa2.58□□□□□ -2
SMARCA2-249ENST00000636233 TSR1Q2NL82 804 aaKnown RBP2.58□□□□□ -2
SMARCA2-249ENST00000636233 VARS2Q5ST30 1063 aaKnown RBP2.58□□□□□ -2
SMARCA2-249ENST00000636233 ZNF687Q8N1G0 1237 aa2.58□□□□□ -2
SMARCA2-249ENST00000636233 CDHR5Q9HBB8 845 aa2.58□□□□□ -2
SMARCA2-249ENST00000636233 PRIM1P49642 420 aaKnown RBP2.57□□□□□ -2
SMARCA2-249ENST00000636233 PRSS12P56730 875 aa2.57□□□□□ -2
SMARCA2-249ENST00000636233 PACS2Q86VP3 889 aa2.57□□□□□ -2
SMARCA2-249ENST00000636233 RBM46Q8TBY0 533 aaKnown RBP2.57□□□□□ -2
SMARCA2-249ENST00000636233 CDCA7LQ96GN5 454 aa2.57□□□□□ -2
SMARCA2-249ENST00000636233 KCNK17Q96T54 332 aa2.57□□□□□ -2
SMARCA2-249ENST00000636233 SLC4A5Q9BY07 1137 aa2.57□□□□□ -2
SMARCA2-249ENST00000636233 NPDC1Q9NQX5 325 aaPredicted RBP2.57□□□□□ -2
SMARCA2-249ENST00000636233 TRIM6-TRIM34B2RNG4 842 aa2.56□□□□□ -2
SMARCA2-249ENST00000636233 NBPF26B4DH59 902 aa2.56□□□□□ -2
SMARCA2-249ENST00000636233 TRIM66O15016 1216 aa2.56□□□□□ -2
SMARCA2-249ENST00000636233 PDE4DQ08499 809 aa2.56□□□□□ -2
SMARCA2-249ENST00000636233 NEUROD2Q15784 382 aa2.56□□□□□ -2
SMARCA2-249ENST00000636233 PADI6Q6TGC4 694 aa2.56□□□□□ -2
SMARCA2-249ENST00000636233 TTC13Q8NBP0 860 aa2.56□□□□□ -2
SMARCA2-249ENST00000636233 CCDC102AQ96A19 550 aa2.56□□□□□ -2
SMARCA2-249ENST00000636233 IRX2Q9BZI1 471 aaPredicted RBP2.56□□□□□ -2
SMARCA2-249ENST00000636233 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP2.55□□□□□ -2
SMARCA2-249ENST00000636233 LOC100996750A0A140TA64 210 aa2.55□□□□□ -2
SMARCA2-249ENST00000636233 TK2O00142 265 aa2.55□□□□□ -2
SMARCA2-249ENST00000636233 COL9A1P20849 921 aa2.55□□□□□ -2
SMARCA2-249ENST00000636233 FECHP22830 423 aa2.55□□□□□ -2
SMARCA2-249ENST00000636233 CLCN1P35523 988 aa2.55□□□□□ -2
SMARCA2-249ENST00000636233 SLC4A3P48751 1232 aa2.55□□□□□ -2
SMARCA2-249ENST00000636233 HDGFP51858 240 aaKnown RBP2.55□□□□□ -2
SMARCA2-249ENST00000636233 TTLL12Q14166 644 aaPredicted RBP2.55□□□□□ -2
SMARCA2-249ENST00000636233 AMHR2Q16671 573 aa2.55□□□□□ -2
SMARCA2-249ENST00000636233 STAC3Q96MF2 364 aa2.55□□□□□ -2
SMARCA2-249ENST00000636233 ZBED2Q9BTP6 218 aa2.55□□□□□ -2
SMARCA2-249ENST00000636233 KRTAP4-6Q9BYQ5 205 aa2.55□□□□□ -2
SMARCA2-249ENST00000636233 NBPF3Q9H094 633 aa2.55□□□□□ -2
SMARCA2-249ENST00000636233 RABGEF1Q9UJ41 708 aa2.55□□□□□ -2
SMARCA2-249ENST00000636233 ADGRG1Q9Y653 693 aa2.55□□□□□ -2
SMARCA2-249ENST00000636233 RGS20O76081 388 aa2.54□□□□□ -2
SMARCA2-249ENST00000636233 DNAJB2P25686 324 aa2.54□□□□□ -2
SMARCA2-249ENST00000636233 PSEN2P49810 448 aa2.54□□□□□ -2
SMARCA2-249ENST00000636233 BRPF1P55201 1214 aaPredicted RBP2.54□□□□□ -2
SMARCA2-249ENST00000636233 RSPH4AQ5TD94 716 aa2.54□□□□□ -2
SMARCA2-249ENST00000636233 NUDT18Q6ZVK8 323 aa2.54□□□□□ -2
SMARCA2-249ENST00000636233 METTL3Q86U44 580 aaKnown RBP2.54□□□□□ -2
SMARCA2-249ENST00000636233 SULF1Q8IWU6 871 aa2.54□□□□□ -2
SMARCA2-249ENST00000636233 PXYLP1Q8TE99 480 aa2.54□□□□□ -2
SMARCA2-249ENST00000636233 TATDN2Q93075 761 aa2.54□□□□□ -2
SMARCA2-249ENST00000636233 GPCPD1Q9NPB8 672 aa2.54□□□□□ -2
SMARCA2-249ENST00000636233 TSKSQ9UJT2 592 aa2.54□□□□□ -2
SMARCA2-249ENST00000636233 PNMA3Q9UL41 463 aa2.54□□□□□ -2
SMARCA2-249ENST00000636233 LSM11P83369 360 aaKnown RBP eCLIP2.53□□□□□ -2
SMARCA2-249ENST00000636233 DIXDC1Q155Q3 683 aa2.53□□□□□ -2
SMARCA2-249ENST00000636233 TMEM132AQ24JP5 1023 aa2.53□□□□□ -2
SMARCA2-249ENST00000636233 PROX2Q3B8N5 592 aa2.53□□□□□ -2
SMARCA2-249ENST00000636233 DMRTA1Q5VZB9 504 aa2.53□□□□□ -2
SMARCA2-249ENST00000636233 LAPTM4BQ86VI4 370 aa2.53□□□□□ -2
SMARCA2-249ENST00000636233 MRPL50Q8N5N7 158 aaKnown RBP2.53□□□□□ -2
SMARCA2-249ENST00000636233 NECTIN2Q92692 538 aa2.53□□□□□ -2
SMARCA2-249ENST00000636233 DDRGK1Q96HY6 314 aa2.53□□□□□ -2
SMARCA2-249ENST00000636233 EYA1Q99502 592 aa2.53□□□□□ -2
SMARCA2-249ENST00000636233 KDM4CQ9H3R0 1056 aa2.53□□□□□ -2
SMARCA2-249ENST00000636233 KIAA1468Q9P260 1216 aa2.53□□□□□ -2
SMARCA2-249ENST00000636233 VPS9D1Q9Y2B5 631 aa2.53□□□□□ -2
SMARCA2-249ENST00000636233 AXIN2Q9Y2T1 843 aa2.53□□□□□ -2
SMARCA2-249ENST00000636233 RCCD1A6NED2 376 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms