RNA–Protein interactions for RNA: ENST00000636143.1

MEF2C-238, Transcript of myocyte enhancer factor 2C, human

TSL 5

Gene MEF2C, Length 2,247 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MEF2C-238	ENST00000636143	SLC20A2	Q08357	652 aa		13.56	□□□□□ -0.24
MEF2C-238	ENST00000636143	SECISBP2L	Q93073	1101 aa	Known RBP	13.56	□□□□□ -0.24
MEF2C-238	ENST00000636143	PRX	Q9BXM0	1461 aa		13.56	□□□□□ -0.24
MEF2C-238	ENST00000636143	SMARCA4	P51532	1647 aa		13.56	□□□□□ -0.24
MEF2C-238	ENST00000636143	KIF7	Q2M1P5	1343 aa		13.55	□□□□□ -0.24
MEF2C-238	ENST00000636143	CCDC18	Q5T9S5	1454 aa		13.55	□□□□□ -0.24
MEF2C-238	ENST00000636143	NLRP1	Q9C000	1473 aa		13.55	□□□□□ -0.24
MEF2C-238	ENST00000636143	DDX11L8	A8MPP1	907 aa		13.55	□□□□□ -0.24
MEF2C-238	ENST00000636143	LRRC9	Q6ZRR7	1453 aa		13.54	□□□□□ -0.24
MEF2C-238	ENST00000636143	CDK11B	P21127	795 aa	Known RBP	13.54	□□□□□ -0.24
MEF2C-238	ENST00000636143	CSPP1	Q1MSJ5	1256 aa		13.54	□□□□□ -0.24
MEF2C-238	ENST00000636143	RGS22	Q8NE09	1264 aa		13.54	□□□□□ -0.24
MEF2C-238	ENST00000636143	IRX3	P78415	501 aa	Predicted RBP	13.52	□□□□□ -0.25
MEF2C-238	ENST00000636143	SASS6	Q6UVJ0	657 aa		13.52	□□□□□ -0.25
MEF2C-238	ENST00000636143	CC2D2A	Q9P2K1	1620 aa		13.52	□□□□□ -0.25
MEF2C-238	ENST00000636143	SPATA31E1	Q6ZUB1	1445 aa		13.52	□□□□□ -0.25
MEF2C-238	ENST00000636143	ARHGAP35	Q9NRY4	1499 aa		13.51	□□□□□ -0.25
MEF2C-238	ENST00000636143	DNTTIP2	Q5QJE6	756 aa	Known RBP	13.51	□□□□□ -0.25
MEF2C-238	ENST00000636143	CHMP4A	Q9BY43	222 aa		13.51	□□□□□ -0.25
MEF2C-238	ENST00000636143	FAM50A	Q14320	339 aa	Known RBP	13.51	□□□□□ -0.25
MEF2C-238	ENST00000636143	CHMP5	Q9NZZ3	219 aa		13.51	□□□□□ -0.25
MEF2C-238	ENST00000636143	DHX37	Q8IY37	1157 aa	Known RBP	13.5	□□□□□ -0.25
MEF2C-238	ENST00000636143	SCAPER	Q9BY12	1400 aa		13.5	□□□□□ -0.25
MEF2C-238	ENST00000636143	GAS2L3	Q86XJ1	694 aa		13.49	□□□□□ -0.25
MEF2C-238	ENST00000636143	RNF216	Q9NWF9	866 aa	Predicted RBP	13.49	□□□□□ -0.25
MEF2C-238	ENST00000636143	NOL7	Q9UMY1	257 aa	Known RBP	13.49	□□□□□ -0.25
MEF2C-238	ENST00000636143	HFM1	A2PYH4	1435 aa		13.49	□□□□□ -0.25
MEF2C-238	ENST00000636143	BRD4	O60885	1362 aa	Predicted RBP	13.49	□□□□□ -0.25
MEF2C-238	ENST00000636143	CCDC144A	A2RUR9	1427 aa		13.48	□□□□□ -0.25
MEF2C-238	ENST00000636143	TMC1	Q8TDI8	760 aa		13.48	□□□□□ -0.25
MEF2C-238	ENST00000636143	ARID3A	Q99856	593 aa		13.48	□□□□□ -0.25
MEF2C-238	ENST00000636143	TBC1D2	Q9BYX2	928 aa		13.48	□□□□□ -0.25
MEF2C-238	ENST00000636143	ROCK2	O75116	1388 aa	Known RBP	13.48	□□□□□ -0.25
MEF2C-238	ENST00000636143	PTPN23	Q9H3S7	1636 aa		13.47	□□□□□ -0.25
MEF2C-238	ENST00000636143	MCM5	P33992	734 aa		13.47	□□□□□ -0.25
MEF2C-238	ENST00000636143	BCCIP	Q9P287	314 aa	Known RBP eCLIP	13.47	□□□□□ -0.25
MEF2C-238	ENST00000636143	PLIN1	O60240	522 aa		13.47	□□□□□ -0.25
MEF2C-238	ENST00000636143	SKOR2	Q2VWA4	1001 aa	Predicted RBP	13.47	□□□□□ -0.25
MEF2C-238	ENST00000636143	DNAJC2	Q99543	621 aa	Known RBP	13.46	□□□□□ -0.25
MEF2C-238	ENST00000636143	CFAP43	Q8NDM7	1665 aa		13.46	□□□□□ -0.26
MEF2C-238	ENST00000636143	PTMS	P20962	102 aa		13.45	□□□□□ -0.26
MEF2C-238	ENST00000636143	MMP14	P50281	582 aa		13.45	□□□□□ -0.26
MEF2C-238	ENST00000636143	NASP	P49321	788 aa	Predicted RBP	13.44	□□□□□ -0.26
MEF2C-238	ENST00000636143	IRX5	P78411	483 aa	Predicted RBP	13.44	□□□□□ -0.26
MEF2C-238	ENST00000636143	IBTK	Q9P2D0	1353 aa	Predicted RBP	13.44	□□□□□ -0.26
MEF2C-238	ENST00000636143	CGN	Q9P2M7	1197 aa	Known RBP	13.44	□□□□□ -0.26
MEF2C-238	ENST00000636143	MIA2	Q96PC5	1412 aa		13.44	□□□□□ -0.26
MEF2C-238	ENST00000636143	INSR	P06213	1382 aa		13.44	□□□□□ -0.26
MEF2C-238	ENST00000636143	CBX1	P83916	185 aa		13.44	□□□□□ -0.26
MEF2C-238	ENST00000636143	TBC1D32	Q96NH3	1257 aa		13.43	□□□□□ -0.26
MEF2C-238	ENST00000636143	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	13.43	□□□□□ -0.26
MEF2C-238	ENST00000636143	ZBTB22	O15209	634 aa		13.42	□□□□□ -0.26
MEF2C-238	ENST00000636143	MYRIP	Q8NFW9	859 aa		13.42	□□□□□ -0.26
MEF2C-238	ENST00000636143	ZMYM4	Q5VZL5	1548 aa		13.42	□□□□□ -0.26
MEF2C-238	ENST00000636143	ZMYM3	Q14202	1370 aa		13.42	□□□□□ -0.26
MEF2C-238	ENST00000636143	SEC24B	O95487	1268 aa		13.41	□□□□□ -0.26
MEF2C-238	ENST00000636143	ATAD2B	Q9ULI0	1458 aa		13.41	□□□□□ -0.26
MEF2C-238	ENST00000636143	XPC	Q01831	940 aa	Predicted RBP	13.41	□□□□□ -0.26
MEF2C-238	ENST00000636143	AQR	O60306	1485 aa	Known RBP eCLIP	13.41	□□□□□ -0.26	4e-6	■■■■■ 31
MEF2C-238	ENST00000636143	MAPK8IP3	Q9UPT6	1336 aa		13.4	□□□□□ -0.26
MEF2C-238	ENST00000636143	CTTNBP2	Q8WZ74	1663 aa		13.4	□□□□□ -0.26
MEF2C-238	ENST00000636143	SENP3-EIF4A1	A0A087X0R7	540 aa		13.4	□□□□□ -0.26
MEF2C-238	ENST00000636143	GTF2F1	P35269	517 aa	Known RBP eCLIP	13.4	□□□□□ -0.26
MEF2C-238	ENST00000636143	ATP2B3	Q16720	1220 aa		13.4	□□□□□ -0.26
MEF2C-238	ENST00000636143	PDLIM2	Q96JY6	352 aa		13.4	□□□□□ -0.26
MEF2C-238	ENST00000636143	ZKSCAN5	Q9Y2L8	839 aa		13.4	□□□□□ -0.26
MEF2C-238	ENST00000636143	NBPF1	Q3BBV0	1214 aa		13.4	□□□□□ -0.26
MEF2C-238	ENST00000636143	C20orf194	Q5TEA3	1177 aa		13.4	□□□□□ -0.26
MEF2C-238	ENST00000636143	UPF2	Q9HAU5	1272 aa	Known RBP	13.4	□□□□□ -0.26
MEF2C-238	ENST00000636143	FMN1	Q68DA7	1419 aa		13.4	□□□□□ -0.26
MEF2C-238	ENST00000636143	HECW1	Q76N89	1606 aa		13.39	□□□□□ -0.27
MEF2C-238	ENST00000636143	PLEKHH2	Q8IVE3	1493 aa		13.39	□□□□□ -0.27
MEF2C-238	ENST00000636143	ZNF710	Q8N1W2	664 aa		13.39	□□□□□ -0.27
MEF2C-238	ENST00000636143	SAMD1	Q6SPF0	538 aa	Predicted RBP	13.39	□□□□□ -0.27
MEF2C-238	ENST00000636143	ZNF692	Q9BU19	519 aa	Predicted RBP	13.39	□□□□□ -0.27
MEF2C-238	ENST00000636143	MYBBP1A	Q9BQG0	1328 aa	Known RBP	13.38	□□□□□ -0.27
MEF2C-238	ENST00000636143	RBM25	P49756	843 aa	Known RBP	13.38	□□□□□ -0.27
MEF2C-238	ENST00000636143	PRIMPOL	Q96LW4	560 aa		13.37	□□□□□ -0.27
MEF2C-238	ENST00000636143	NAIP	Q13075	1403 aa		13.37	□□□□□ -0.27
MEF2C-238	ENST00000636143	NCOA3	Q9Y6Q9	1424 aa		13.37	□□□□□ -0.27
MEF2C-238	ENST00000636143	CDCA7L	Q96GN5	454 aa		13.37	□□□□□ -0.27
MEF2C-238	ENST00000636143	KIF15	Q9NS87	1388 aa		13.36	□□□□□ -0.27
MEF2C-238	ENST00000636143	NINL	Q9Y2I6	1382 aa		13.36	□□□□□ -0.27
MEF2C-238	ENST00000636143	YY1AP1	Q9H869	796 aa		13.36	□□□□□ -0.27
MEF2C-238	ENST00000636143	EIF3A	Q14152	1382 aa	Known RBP	13.36	□□□□□ -0.27
MEF2C-238	ENST00000636143	DDIT3	P35638	169 aa		13.36	□□□□□ -0.27
MEF2C-238	ENST00000636143	PANK3	Q9H999	370 aa		13.36	□□□□□ -0.27
MEF2C-238	ENST00000636143	CLGN	O14967	610 aa		13.35	□□□□□ -0.27
MEF2C-238	ENST00000636143	HSP90AB1	P08238	724 aa	Known RBP	13.35	□□□□□ -0.27
MEF2C-238	ENST00000636143	HMGN5	P82970	282 aa	Known RBP	13.35	□□□□□ -0.27
MEF2C-238	ENST00000636143	RALBP1	Q15311	655 aa		13.35	□□□□□ -0.27
MEF2C-238	ENST00000636143	TOP2B	Q02880	1626 aa		13.35	□□□□□ -0.27
MEF2C-238	ENST00000636143	KCNJ4	P48050	445 aa		13.35	□□□□□ -0.27
MEF2C-238	ENST00000636143	GABPB1	Q06547	395 aa	Predicted RBP	13.35	□□□□□ -0.27
MEF2C-238	ENST00000636143	L3MBTL2	Q969R5	705 aa		13.35	□□□□□ -0.27
MEF2C-238	ENST00000636143	GBP4	Q96PP9	640 aa		13.35	□□□□□ -0.27
MEF2C-238	ENST00000636143	CIZ1	Q9ULV3	898 aa	Predicted RBP	13.34	□□□□□ -0.27
MEF2C-238	ENST00000636143	DENND4B	O75064	1496 aa	Predicted RBP	13.34	□□□□□ -0.27
MEF2C-238	ENST00000636143	CCDC66	A2RUB6	948 aa		13.33	□□□□□ -0.27
MEF2C-238	ENST00000636143	TSPYL1	Q9H0U9	437 aa		13.33	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms