RNA–Protein interactions for RNA: ENST00000635991.1

CRNDE-213, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 5 BASIC

Gene CRNDE, Length 546 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-213ENST00000635991 RBM33Q96EV2 1170 aaKnown RBP10.18□□□□□ -0.78
CRNDE-213ENST00000635991 NPDC1Q9NQX5 325 aaPredicted RBP10.18□□□□□ -0.78
CRNDE-213ENST00000635991 GTF3C3Q9Y5Q9 886 aa10.18□□□□□ -0.78
CRNDE-213ENST00000635991 ARSIQ5FYB1 569 aa10.17□□□□□ -0.78
CRNDE-213ENST00000635991 ZNF454Q8N9F8 522 aa10.17□□□□□ -0.78
CRNDE-213ENST00000635991 KDM4CQ9H3R0 1056 aa10.17□□□□□ -0.78
CRNDE-213ENST00000635991 CDHR5Q9HBB8 845 aa10.17□□□□□ -0.78
CRNDE-213ENST00000635991 PSDA5PKW4 1024 aaPredicted RBP10.16□□□□□ -0.78
CRNDE-213ENST00000635991 FECHP22830 423 aa10.16□□□□□ -0.78
CRNDE-213ENST00000635991 GPBP1L1Q9HC44 474 aaPredicted RBP10.16□□□□□ -0.78
CRNDE-213ENST00000635991 TSR1Q2NL82 804 aaKnown RBP10.15□□□□□ -0.78
CRNDE-213ENST00000635991 ERICH6Q7L0X2 663 aa10.15□□□□□ -0.78
CRNDE-213ENST00000635991 RBM27Q9P2N5 1060 aaKnown RBP10.14□□□□□ -0.79
CRNDE-213ENST00000635991 C6orf132Q5T0Z8 1188 aa10.13□□□□□ -0.79
CRNDE-213ENST00000635991 KHSRPQ92945 711 aaKnown RBP eCLIP10.12□□□□□ -0.79
CRNDE-213ENST00000635991 PPP4R3BQ5MIZ7 849 aa10.11□□□□□ -0.79
CRNDE-213ENST00000635991 PARP9Q8IXQ6 854 aa10.1□□□□□ -0.79
CRNDE-213ENST00000635991 LHX6Q9UPM6 363 aa10.1□□□□□ -0.79
CRNDE-213ENST00000635991 HOXB1P14653 301 aaPredicted RBP10.09□□□□□ -0.79
CRNDE-213ENST00000635991 DDRGK1Q96HY6 314 aa10.09□□□□□ -0.79
CRNDE-213ENST00000635991 ADAM33Q9BZ11 813 aa10.09□□□□□ -0.79
CRNDE-213ENST00000635991 TTLL12Q14166 644 aaPredicted RBP10.08□□□□□ -0.8
CRNDE-213ENST00000635991 TTC13Q8NBP0 860 aa10.07□□□□□ -0.8
CRNDE-213ENST00000635991 BCL2L12Q9HB09 334 aa10.07□□□□□ -0.8
CRNDE-213ENST00000635991 OATP04181 439 aa10.06□□□□□ -0.8
CRNDE-213ENST00000635991 CLCN1P35523 988 aa10.05□□□□□ -0.8
CRNDE-213ENST00000635991 PADI6Q6TGC4 694 aa10.05□□□□□ -0.8
CRNDE-213ENST00000635991 IL27Q8NEV9 243 aa10.04□□□□□ -0.8
CRNDE-213ENST00000635991 PPP1R3GB7ZBB8 358 aa10.03□□□□□ -0.8
CRNDE-213ENST00000635991 PRSS12P56730 875 aa10.03□□□□□ -0.8
CRNDE-213ENST00000635991 GIGYF2Q6Y7W6 1299 aaKnown RBP10.03□□□□□ -0.8
CRNDE-213ENST00000635991 METTL3Q86U44 580 aaKnown RBP10.03□□□□□ -0.8
CRNDE-213ENST00000635991 OTUD5Q96G74 571 aa10.03□□□□□ -0.8
CRNDE-213ENST00000635991 ADGRG1Q9Y653 693 aa10.03□□□□□ -0.8
CRNDE-213ENST00000635991 PTPREP23469 700 aa10.02□□□□□ -0.81
CRNDE-213ENST00000635991 CDCA7LQ96GN5 454 aa10.02□□□□□ -0.81
CRNDE-213ENST00000635991 TMUB1Q9BVT8 246 aa10.02□□□□□ -0.81
CRNDE-213ENST00000635991 FAM117AQ9C073 453 aa10.02□□□□□ -0.81
CRNDE-213ENST00000635991 GPCPD1Q9NPB8 672 aa10.02□□□□□ -0.81
CRNDE-213ENST00000635991 PXYLP1Q8TE99 480 aa10□□□□□ -0.81
CRNDE-213ENST00000635991 RBM46Q8TBY0 533 aaKnown RBP9.99□□□□□ -0.81
CRNDE-213ENST00000635991 PHOX2BQ99453 314 aa9.99□□□□□ -0.81
CRNDE-213ENST00000635991 GOPCQ9HD26 462 aa9.99□□□□□ -0.81
CRNDE-213ENST00000635991 PLEKHG3A1L390 1219 aa9.98□□□□□ -0.81
CRNDE-213ENST00000635991 MDM2Q00987 491 aaPredicted RBP9.98□□□□□ -0.81
CRNDE-213ENST00000635991 LHX8Q68G74 356 aa9.98□□□□□ -0.81
CRNDE-213ENST00000635991 KCNH8Q96L42 1107 aa9.98□□□□□ -0.81
CRNDE-213ENST00000635991 TIMELESSQ9UNS1 1208 aa9.98□□□□□ -0.81
CRNDE-213ENST00000635991 COL9A1P20849 921 aa9.97□□□□□ -0.81
CRNDE-213ENST00000635991 REPIN1Q9BWE0 567 aaKnown RBP9.97□□□□□ -0.81
CRNDE-213ENST00000635991 MS4A1P11836 297 aa9.96□□□□□ -0.82
CRNDE-213ENST00000635991 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.95□□□□□ -0.82
CRNDE-213ENST00000635991 ONECUT3O60422 494 aaPredicted RBP9.95□□□□□ -0.82
CRNDE-213ENST00000635991 NBPF26B4DH59 902 aa9.94□□□□□ -0.82
CRNDE-213ENST00000635991 FAM161AQ3B820 660 aa9.94□□□□□ -0.82
CRNDE-213ENST00000635991 FAM217BQ9NTX9 383 aaPredicted RBP9.94□□□□□ -0.82
CRNDE-213ENST00000635991 TRIM6-TRIM34B2RNG4 842 aa9.93□□□□□ -0.82
CRNDE-213ENST00000635991 SSTR3P32745 418 aaPredicted RBP9.92□□□□□ -0.82
CRNDE-213ENST00000635991 PACS2Q86VP3 889 aa9.92□□□□□ -0.82
CRNDE-213ENST00000635991 TSKSQ9UJT2 592 aa9.92□□□□□ -0.82
CRNDE-213ENST00000635991 C14orf37Q86TY3 774 aa9.91□□□□□ -0.82
CRNDE-213ENST00000635991 KCNK17Q96T54 332 aa9.91□□□□□ -0.82
CRNDE-213ENST00000635991 EYA1Q99502 592 aa9.91□□□□□ -0.82
CRNDE-213ENST00000635991 FAM198AQ9UFP1 575 aa9.91□□□□□ -0.82
CRNDE-213ENST00000635991 RSPH6AQ9H0K4 717 aa9.9□□□□□ -0.82
CRNDE-213ENST00000635991 DNAJB2P25686 324 aa9.89□□□□□ -0.83
CRNDE-213ENST00000635991 SH3D19Q5HYK7 790 aa9.89□□□□□ -0.83
CRNDE-213ENST00000635991 ERBB3P21860 1342 aa9.88□□□□□ -0.83
CRNDE-213ENST00000635991 RCCD1A6NED2 376 aa9.88□□□□□ -0.83
CRNDE-213ENST00000635991 PBX2P40425 430 aa9.88□□□□□ -0.83
CRNDE-213ENST00000635991 NUDT18Q6ZVK8 323 aa9.88□□□□□ -0.83
CRNDE-213ENST00000635991 TATDN2Q93075 761 aa9.88□□□□□ -0.83
CRNDE-213ENST00000635991 BEGAINQ9BUH8 593 aa9.88□□□□□ -0.83
CRNDE-213ENST00000635991 SULF1Q8IWU6 871 aa9.87□□□□□ -0.83
CRNDE-213ENST00000635991 NLRP7Q8WX94 980 aa9.87□□□□□ -0.83
CRNDE-213ENST00000635991 ZBED2Q9BTP6 218 aa9.87□□□□□ -0.83
CRNDE-213ENST00000635991 SLC4A5Q9BY07 1137 aa9.87□□□□□ -0.83
CRNDE-213ENST00000635991 PNMA3Q9UL41 463 aa9.87□□□□□ -0.83
CRNDE-213ENST00000635991 ARHGAP33O14559 1287 aa9.86□□□□□ -0.83
CRNDE-213ENST00000635991 DIXDC1Q155Q3 683 aa9.86□□□□□ -0.83
CRNDE-213ENST00000635991 VARS2Q5ST30 1063 aaKnown RBP9.86□□□□□ -0.83
CRNDE-213ENST00000635991 PCMTD1Q96MG8 357 aaPredicted RBP9.86□□□□□ -0.83
CRNDE-213ENST00000635991 ST18O60284 1047 aa9.85□□□□□ -0.83
CRNDE-213ENST00000635991 EMP3P54852 163 aa9.85□□□□□ -0.83
CRNDE-213ENST00000635991 TMEM134Q9H6X4 195 aa9.85□□□□□ -0.83
CRNDE-213ENST00000635991 SKIV2LQ15477 1246 aaKnown RBP9.84□□□□□ -0.83
CRNDE-213ENST00000635991 PROX2Q3B8N5 592 aa9.84□□□□□ -0.83
CRNDE-213ENST00000635991 C3orf80F5H4A9 247 aa9.82□□□□□ -0.84
CRNDE-213ENST00000635991 RABGEF1Q9UJ41 708 aa9.82□□□□□ -0.84
CRNDE-213ENST00000635991 PSEN2P49810 448 aa9.81□□□□□ -0.84
CRNDE-213ENST00000635991 ZNF687Q8N1G0 1237 aa9.81□□□□□ -0.84
CRNDE-213ENST00000635991 KIAA1468Q9P260 1216 aa9.81□□□□□ -0.84
CRNDE-213ENST00000635991 CD46P15529 392 aa9.8□□□□□ -0.84
CRNDE-213ENST00000635991 MYSM1Q5VVJ2 828 aa9.79□□□□□ -0.84
CRNDE-213ENST00000635991 FLIIQ13045 1269 aa9.78□□□□□ -0.84
CRNDE-213ENST00000635991 POTEEQ6S8J3 1075 aa9.78□□□□□ -0.84
CRNDE-213ENST00000635991 SMAPO00193 183 aa9.77□□□□□ -0.85
CRNDE-213ENST00000635991 TBC1D2Q9BYX2 928 aa9.77□□□□□ -0.85
CRNDE-213ENST00000635991 DDX11L8A8MPP1 907 aa9.76□□□□□ -0.85
CRNDE-213ENST00000635991 CLK2P49760 499 aaKnown RBP9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms