RNA–Protein interactions for RNA: ENST00000635991.1

CRNDE-213, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 5 BASIC

Gene CRNDE, Length 546 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-213ENST00000635991 RBM33Q96EV2 1170 aaKnown RBP10.18□□□□□ -0.78
CRNDE-213ENST00000635991 NPDC1Q9NQX5 325 aaPredicted RBP10.18□□□□□ -0.78
CRNDE-213ENST00000635991 GTF3C3Q9Y5Q9 886 aa10.18□□□□□ -0.78
CRNDE-213ENST00000635991 ARSIQ5FYB1 569 aa10.17□□□□□ -0.78
CRNDE-213ENST00000635991 ZNF454Q8N9F8 522 aa10.17□□□□□ -0.78
CRNDE-213ENST00000635991 KDM4CQ9H3R0 1056 aa10.17□□□□□ -0.78
CRNDE-213ENST00000635991 CDHR5Q9HBB8 845 aa10.17□□□□□ -0.78
CRNDE-213ENST00000635991 PSDA5PKW4 1024 aaPredicted RBP10.16□□□□□ -0.78
CRNDE-213ENST00000635991 FECHP22830 423 aa10.16□□□□□ -0.78
CRNDE-213ENST00000635991 GPBP1L1Q9HC44 474 aaPredicted RBP10.16□□□□□ -0.78
CRNDE-213ENST00000635991 TSR1Q2NL82 804 aaKnown RBP10.15□□□□□ -0.78
CRNDE-213ENST00000635991 ERICH6Q7L0X2 663 aa10.15□□□□□ -0.78
CRNDE-213ENST00000635991 RBM27Q9P2N5 1060 aaKnown RBP10.14□□□□□ -0.79
CRNDE-213ENST00000635991 C6orf132Q5T0Z8 1188 aa10.13□□□□□ -0.79
CRNDE-213ENST00000635991 KHSRPQ92945 711 aaKnown RBP eCLIP10.12□□□□□ -0.79
CRNDE-213ENST00000635991 PPP4R3BQ5MIZ7 849 aa10.11□□□□□ -0.79
CRNDE-213ENST00000635991 PARP9Q8IXQ6 854 aa10.1□□□□□ -0.79
CRNDE-213ENST00000635991 LHX6Q9UPM6 363 aa10.1□□□□□ -0.79
CRNDE-213ENST00000635991 HOXB1P14653 301 aaPredicted RBP10.09□□□□□ -0.79
CRNDE-213ENST00000635991 DDRGK1Q96HY6 314 aa10.09□□□□□ -0.79
CRNDE-213ENST00000635991 ADAM33Q9BZ11 813 aa10.09□□□□□ -0.79
CRNDE-213ENST00000635991 TTLL12Q14166 644 aaPredicted RBP10.08□□□□□ -0.8
CRNDE-213ENST00000635991 TTC13Q8NBP0 860 aa10.07□□□□□ -0.8
CRNDE-213ENST00000635991 BCL2L12Q9HB09 334 aa10.07□□□□□ -0.8
CRNDE-213ENST00000635991 OATP04181 439 aa10.06□□□□□ -0.8
CRNDE-213ENST00000635991 CLCN1P35523 988 aa10.05□□□□□ -0.8
CRNDE-213ENST00000635991 PADI6Q6TGC4 694 aa10.05□□□□□ -0.8
CRNDE-213ENST00000635991 IL27Q8NEV9 243 aa10.04□□□□□ -0.8
CRNDE-213ENST00000635991 PPP1R3GB7ZBB8 358 aa10.03□□□□□ -0.8
CRNDE-213ENST00000635991 PRSS12P56730 875 aa10.03□□□□□ -0.8
CRNDE-213ENST00000635991 GIGYF2Q6Y7W6 1299 aaKnown RBP10.03□□□□□ -0.8
CRNDE-213ENST00000635991 METTL3Q86U44 580 aaKnown RBP10.03□□□□□ -0.8
CRNDE-213ENST00000635991 OTUD5Q96G74 571 aa10.03□□□□□ -0.8
CRNDE-213ENST00000635991 ADGRG1Q9Y653 693 aa10.03□□□□□ -0.8
CRNDE-213ENST00000635991 PTPREP23469 700 aa10.02□□□□□ -0.81
CRNDE-213ENST00000635991 CDCA7LQ96GN5 454 aa10.02□□□□□ -0.81
CRNDE-213ENST00000635991 TMUB1Q9BVT8 246 aa10.02□□□□□ -0.81
CRNDE-213ENST00000635991 FAM117AQ9C073 453 aa10.02□□□□□ -0.81
CRNDE-213ENST00000635991 GPCPD1Q9NPB8 672 aa10.02□□□□□ -0.81
CRNDE-213ENST00000635991 PXYLP1Q8TE99 480 aa10□□□□□ -0.81
CRNDE-213ENST00000635991 RBM46Q8TBY0 533 aaKnown RBP9.99□□□□□ -0.81
CRNDE-213ENST00000635991 PHOX2BQ99453 314 aa9.99□□□□□ -0.81
CRNDE-213ENST00000635991 GOPCQ9HD26 462 aa9.99□□□□□ -0.81
CRNDE-213ENST00000635991 PLEKHG3A1L390 1219 aa9.98□□□□□ -0.81
CRNDE-213ENST00000635991 MDM2Q00987 491 aaPredicted RBP9.98□□□□□ -0.81
CRNDE-213ENST00000635991 LHX8Q68G74 356 aa9.98□□□□□ -0.81
CRNDE-213ENST00000635991 KCNH8Q96L42 1107 aa9.98□□□□□ -0.81
CRNDE-213ENST00000635991 TIMELESSQ9UNS1 1208 aa9.98□□□□□ -0.81
CRNDE-213ENST00000635991 COL9A1P20849 921 aa9.97□□□□□ -0.81
CRNDE-213ENST00000635991 REPIN1Q9BWE0 567 aaKnown RBP9.97□□□□□ -0.81
CRNDE-213ENST00000635991 MS4A1P11836 297 aa9.96□□□□□ -0.82
CRNDE-213ENST00000635991 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.95□□□□□ -0.82
CRNDE-213ENST00000635991 ONECUT3O60422 494 aaPredicted RBP9.95□□□□□ -0.82
CRNDE-213ENST00000635991 NBPF26B4DH59 902 aa9.94□□□□□ -0.82
CRNDE-213ENST00000635991 FAM161AQ3B820 660 aa9.94□□□□□ -0.82
CRNDE-213ENST00000635991 FAM217BQ9NTX9 383 aaPredicted RBP9.94□□□□□ -0.82
CRNDE-213ENST00000635991 TRIM6-TRIM34B2RNG4 842 aa9.93□□□□□ -0.82
CRNDE-213ENST00000635991 SSTR3P32745 418 aaPredicted RBP9.92□□□□□ -0.82
CRNDE-213ENST00000635991 PACS2Q86VP3 889 aa9.92□□□□□ -0.82
CRNDE-213ENST00000635991 TSKSQ9UJT2 592 aa9.92□□□□□ -0.82
CRNDE-213ENST00000635991 C14orf37Q86TY3 774 aa9.91□□□□□ -0.82
CRNDE-213ENST00000635991 KCNK17Q96T54 332 aa9.91□□□□□ -0.82
CRNDE-213ENST00000635991 EYA1Q99502 592 aa9.91□□□□□ -0.82
CRNDE-213ENST00000635991 FAM198AQ9UFP1 575 aa9.91□□□□□ -0.82
CRNDE-213ENST00000635991 RSPH6AQ9H0K4 717 aa9.9□□□□□ -0.82
CRNDE-213ENST00000635991 DNAJB2P25686 324 aa9.89□□□□□ -0.83
CRNDE-213ENST00000635991 SH3D19Q5HYK7 790 aa9.89□□□□□ -0.83
CRNDE-213ENST00000635991 ERBB3P21860 1342 aa9.88□□□□□ -0.83
CRNDE-213ENST00000635991 RCCD1A6NED2 376 aa9.88□□□□□ -0.83
CRNDE-213ENST00000635991 PBX2P40425 430 aa9.88□□□□□ -0.83
CRNDE-213ENST00000635991 NUDT18Q6ZVK8 323 aa9.88□□□□□ -0.83
CRNDE-213ENST00000635991 TATDN2Q93075 761 aa9.88□□□□□ -0.83
CRNDE-213ENST00000635991 BEGAINQ9BUH8 593 aa9.88□□□□□ -0.83
CRNDE-213ENST00000635991 SULF1Q8IWU6 871 aa9.87□□□□□ -0.83
CRNDE-213ENST00000635991 NLRP7Q8WX94 980 aa9.87□□□□□ -0.83
CRNDE-213ENST00000635991 ZBED2Q9BTP6 218 aa9.87□□□□□ -0.83
CRNDE-213ENST00000635991 SLC4A5Q9BY07 1137 aa9.87□□□□□ -0.83
CRNDE-213ENST00000635991 PNMA3Q9UL41 463 aa9.87□□□□□ -0.83
CRNDE-213ENST00000635991 ARHGAP33O14559 1287 aa9.86□□□□□ -0.83
CRNDE-213ENST00000635991 DIXDC1Q155Q3 683 aa9.86□□□□□ -0.83
CRNDE-213ENST00000635991 VARS2Q5ST30 1063 aaKnown RBP9.86□□□□□ -0.83
CRNDE-213ENST00000635991 PCMTD1Q96MG8 357 aaPredicted RBP9.86□□□□□ -0.83
CRNDE-213ENST00000635991 ST18O60284 1047 aa9.85□□□□□ -0.83
CRNDE-213ENST00000635991 EMP3P54852 163 aa9.85□□□□□ -0.83
CRNDE-213ENST00000635991 TMEM134Q9H6X4 195 aa9.85□□□□□ -0.83
CRNDE-213ENST00000635991 SKIV2LQ15477 1246 aaKnown RBP9.84□□□□□ -0.83
CRNDE-213ENST00000635991 PROX2Q3B8N5 592 aa9.84□□□□□ -0.83
CRNDE-213ENST00000635991 C3orf80F5H4A9 247 aa9.82□□□□□ -0.84
CRNDE-213ENST00000635991 RABGEF1Q9UJ41 708 aa9.82□□□□□ -0.84
CRNDE-213ENST00000635991 PSEN2P49810 448 aa9.81□□□□□ -0.84
CRNDE-213ENST00000635991 ZNF687Q8N1G0 1237 aa9.81□□□□□ -0.84
CRNDE-213ENST00000635991 KIAA1468Q9P260 1216 aa9.81□□□□□ -0.84
CRNDE-213ENST00000635991 CD46P15529 392 aa9.8□□□□□ -0.84
CRNDE-213ENST00000635991 MYSM1Q5VVJ2 828 aa9.79□□□□□ -0.84
CRNDE-213ENST00000635991 FLIIQ13045 1269 aa9.78□□□□□ -0.84
CRNDE-213ENST00000635991 POTEEQ6S8J3 1075 aa9.78□□□□□ -0.84
CRNDE-213ENST00000635991 SMAPO00193 183 aa9.77□□□□□ -0.85
CRNDE-213ENST00000635991 TBC1D2Q9BYX2 928 aa9.77□□□□□ -0.85
CRNDE-213ENST00000635991 DDX11L8A8MPP1 907 aa9.76□□□□□ -0.85
CRNDE-213ENST00000635991 CLK2P49760 499 aaKnown RBP9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms