RNA–Protein interactions for RNA: ENST00000635722.1

CHRNA7-204, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 917 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-204ENST00000635722 PKD2Q13563 968 aa33.44■■■□□ 2.94
CHRNA7-204ENST00000635722 PPP6R1Q9UPN7 881 aa33.44■■■□□ 2.94
CHRNA7-204ENST00000635722 POLR1AO95602 1720 aaPredicted RBP33.44■■■□□ 2.94
CHRNA7-204ENST00000635722 NEURL4Q96JN8 1562 aa33.43■■■□□ 2.94
CHRNA7-204ENST00000635722 FBXO31Q5XUX0 539 aaPredicted RBP33.43■■■□□ 2.94
CHRNA7-204ENST00000635722 ARHGEF5Q12774 1597 aa33.43■■■□□ 2.94
CHRNA7-204ENST00000635722 PZPP20742 1482 aa33.42■■■□□ 2.94
CHRNA7-204ENST00000635722 TNRQ92752 1358 aa33.4■■■□□ 2.94
CHRNA7-204ENST00000635722 FAM135AQ9P2D6 1515 aa33.37■■■□□ 2.93
CHRNA7-204ENST00000635722 LRRC9Q6ZRR7 1453 aa33.34■■■□□ 2.93
CHRNA7-204ENST00000635722 UBAP1LF5GYI3 381 aa33.33■■■□□ 2.93
CHRNA7-204ENST00000635722 VPS8Q8N3P4 1428 aa33.32■■■□□ 2.92
CHRNA7-204ENST00000635722 RNF17Q9BXT8 1623 aaKnown RBP33.31■■■□□ 2.92
CHRNA7-204ENST00000635722 WASHC2CQ9Y4E1 1318 aa33.29■■■□□ 2.92
CHRNA7-204ENST00000635722 MAST1Q9Y2H9 1570 aa33.28■■■□□ 2.92
CHRNA7-204ENST00000635722 ABCC3O15438 1527 aa33.26■■■□□ 2.91
CHRNA7-204ENST00000635722 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP33.25■■■□□ 2.91
CHRNA7-204ENST00000635722 LOC105371045A0A1W2PR82 267 aa33.25■■■□□ 2.91
CHRNA7-204ENST00000635722 MROH1Q8NDA8 1641 aa33.24■■■□□ 2.91
CHRNA7-204ENST00000635722 MIA2Q96PC5 1412 aa33.23■■■□□ 2.91
CHRNA7-204ENST00000635722 RSPH4AQ5TD94 716 aa33.23■■■□□ 2.91
CHRNA7-204ENST00000635722 UGGT1Q9NYU2 1555 aa33.22■■■□□ 2.91
CHRNA7-204ENST00000635722 KANK4Q5T7N3 995 aaPredicted RBP33.22■■■□□ 2.91
CHRNA7-204ENST00000635722 VWDEQ8N2E2 1590 aa33.21■■■□□ 2.91
CHRNA7-204ENST00000635722 ZC3H13Q5T200 1668 aaKnown RBP33.21■■■□□ 2.91
CHRNA7-204ENST00000635722 NLRP1Q9C000 1473 aa33.21■■■□□ 2.91
CHRNA7-204ENST00000635722 CEP152O94986 1710 aa33.21■■■□□ 2.91
CHRNA7-204ENST00000635722 EIF2AK4Q9P2K8 1649 aaKnown RBP33.2■■■□□ 2.9
CHRNA7-204ENST00000635722 SHANK2Q9UPX8 1470 aa33.19■■■□□ 2.9
CHRNA7-204ENST00000635722 SOCS7O14512 581 aa33.19■■■□□ 2.9
CHRNA7-204ENST00000635722 TSPY4P0CV99 314 aa33.19■■■□□ 2.9
CHRNA7-204ENST00000635722 TSPY10P0CW01 314 aa33.19■■■□□ 2.9
CHRNA7-204ENST00000635722 CPS1P31327 1500 aa33.18■■■□□ 2.9
CHRNA7-204ENST00000635722 DEPDC5O75140 1603 aa33.17■■■□□ 2.9
CHRNA7-204ENST00000635722 MYOM3Q5VTT5 1437 aa33.15■■■□□ 2.9
CHRNA7-204ENST00000635722 IQGAP1P46940 1657 aa33.14■■■□□ 2.9
CHRNA7-204ENST00000635722 ERVK-7P63135 1459 aa33.14■■■□□ 2.9
CHRNA7-204ENST00000635722 NPHP4O75161 1426 aaPredicted RBP33.13■■■□□ 2.89
CHRNA7-204ENST00000635722 MAP3K1Q13233 1512 aa33.12■■■□□ 2.89
CHRNA7-204ENST00000635722 STRCP1A6NGW2 1772 aa33.11■■■□□ 2.89
CHRNA7-204ENST00000635722 MED14O60244 1454 aa33.11■■■□□ 2.89
CHRNA7-204ENST00000635722 ALKQ9UM73 1620 aa33.1■■■□□ 2.89
CHRNA7-204ENST00000635722 SCAF1Q9H7N4 1312 aaKnown RBP33.1■■■□□ 2.89
CHRNA7-204ENST00000635722 ANKLE2Q86XL3 938 aa33.1■■■□□ 2.89
CHRNA7-204ENST00000635722 CFAP65Q6ZU64 1925 aaKnown RBP33.1■■■□□ 2.89
CHRNA7-204ENST00000635722 CROCC2H7BZ55 1655 aa33.1■■■□□ 2.89
CHRNA7-204ENST00000635722 PIP4K2BP78356 416 aa33.08■■■□□ 2.89
CHRNA7-204ENST00000635722 THEMISQ8N1K5 641 aaPredicted RBP33.08■■■□□ 2.89
CHRNA7-204ENST00000635722 UBR1Q8IWV7 1749 aa33.05■■■□□ 2.88
CHRNA7-204ENST00000635722 HSPA1LP34931 641 aa33.05■■■□□ 2.88
CHRNA7-204ENST00000635722 DUOX2Q9NRD8 1548 aa33.05■■■□□ 2.88
CHRNA7-204ENST00000635722 PRDM15P57071 1507 aaPredicted RBP33.02■■■□□ 2.88
CHRNA7-204ENST00000635722 MED1Q15648 1581 aaPredicted RBP33.01■■■□□ 2.88
CHRNA7-204ENST00000635722 PTPN23Q9H3S7 1636 aa33■■■□□ 2.87
CHRNA7-204ENST00000635722 KIF15Q9NS87 1388 aa32.98■■■□□ 2.87
CHRNA7-204ENST00000635722 ABCC5O15440 1437 aa32.98■■■□□ 2.87
CHRNA7-204ENST00000635722 LRRC7Q96NW7 1537 aa32.94■■■□□ 2.86
CHRNA7-204ENST00000635722 TOM1O60784 492 aa32.94■■■□□ 2.86
CHRNA7-204ENST00000635722 SYNMO15061 1565 aa32.94■■■□□ 2.86
CHRNA7-204ENST00000635722 ERBINQ96RT1 1412 aa32.91■■■□□ 2.86
CHRNA7-204ENST00000635722 SCAF11Q99590 1463 aaKnown RBP32.91■■■□□ 2.86
CHRNA7-204ENST00000635722 PIK3C2BO00750 1634 aa32.89■■■□□ 2.86
CHRNA7-204ENST00000635722 DAPK1P53355 1430 aa32.89■■■□□ 2.86
CHRNA7-204ENST00000635722 RRP7BPQ9NSQ0 103 aa32.89■■■□□ 2.86
CHRNA7-204ENST00000635722 ARHGAP23Q9P227 1491 aa32.88■■■□□ 2.85
CHRNA7-204ENST00000635722 SLIT1O75093 1534 aa32.87■■■□□ 2.85
CHRNA7-204ENST00000635722 ARHGAP31Q2M1Z3 1444 aa32.85■■■□□ 2.85
CHRNA7-204ENST00000635722 FGD6Q6ZV73 1430 aa32.85■■■□□ 2.85
CHRNA7-204ENST00000635722 LTKP29376 864 aa32.84■■■□□ 2.85
CHRNA7-204ENST00000635722 SENP3Q9H4L4 574 aaPredicted RBP32.84■■■□□ 2.85
CHRNA7-204ENST00000635722 GRWD1Q9BQ67 446 aaKnown RBP eCLIP32.83■■■□□ 2.85
CHRNA7-204ENST00000635722 XIRP1Q702N8 1843 aaKnown RBP32.82■■■□□ 2.84
CHRNA7-204ENST00000635722 TXNDC2Q86VQ3 553 aa32.75■■■□□ 2.83
CHRNA7-204ENST00000635722 CHIC2Q9UKJ5 165 aa32.75■■■□□ 2.83
CHRNA7-204ENST00000635722 LMTK2Q8IWU2 1503 aa32.73■■■□□ 2.83
CHRNA7-204ENST00000635722 EFCAB6Q5THR3 1501 aa32.71■■■□□ 2.83
CHRNA7-204ENST00000635722 TMEM2Q9UHN6 1383 aa32.7■■■□□ 2.83
CHRNA7-204ENST00000635722 KANK1Q14678 1352 aa32.7■■■□□ 2.82
CHRNA7-204ENST00000635722 APLP2Q06481 763 aa32.69■■■□□ 2.82
CHRNA7-204ENST00000635722 ANKRD30AQ9BXX3 1397 aa32.69■■■□□ 2.82
CHRNA7-204ENST00000635722 KDM5AP29375 1690 aaKnown RBP32.69■■■□□ 2.82
CHRNA7-204ENST00000635722 ADGRB3O60242 1522 aa32.64■■■□□ 2.82
CHRNA7-204ENST00000635722 EID1Q9Y6B2 187 aa32.63■■■□□ 2.81
CHRNA7-204ENST00000635722 ADGRL2O95490 1459 aa32.62■■■□□ 2.81
CHRNA7-204ENST00000635722 IDI1Q13907 227 aa32.62■■■□□ 2.81
CHRNA7-204ENST00000635722 NOS1P29475 1434 aa32.61■■■□□ 2.81
CHRNA7-204ENST00000635722 PHF23Q9BUL5 403 aaPredicted RBP32.6■■■□□ 2.81
CHRNA7-204ENST00000635722 STAG3Q9UJ98 1225 aa32.6■■■□□ 2.81
CHRNA7-204ENST00000635722 TET3O43151 1660 aa32.59■■■□□ 2.81
CHRNA7-204ENST00000635722 MYO5BQ9ULV0 1848 aa32.58■■■□□ 2.81
CHRNA7-204ENST00000635722 SLC26A8Q96RN1 970 aa32.54■■■□□ 2.8
CHRNA7-204ENST00000635722 TMEM94Q12767 1356 aa32.54■■■□□ 2.8
CHRNA7-204ENST00000635722 RBM33Q96EV2 1170 aaKnown RBP32.53■■■□□ 2.8
CHRNA7-204ENST00000635722 NWD1Q149M9 1564 aa32.52■■■□□ 2.8
CHRNA7-204ENST00000635722 GCC2Q8IWJ2 1684 aa32.52■■■□□ 2.8
CHRNA7-204ENST00000635722 FAM50AQ14320 339 aaKnown RBP32.51■■■□□ 2.79
CHRNA7-204ENST00000635722 ANKRD50Q9ULJ7 1429 aa32.49■■■□□ 2.79
CHRNA7-204ENST00000635722 ROBO1Q9Y6N7 1651 aa32.49■■■□□ 2.79
CHRNA7-204ENST00000635722 UNC13BO14795 1591 aa32.45■■■□□ 2.78
CHRNA7-204ENST00000635722 ZFYVE9O95405 1425 aa32.44■■■□□ 2.78
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms