RNA–Protein interactions for RNA: ENST00000635214.1

PATJ-216, Transcript of PATJ, crumbs cell polarity complex component, humanhuman

TSL 1 (best)

Gene PATJ, Length 4,863 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PATJ-216ENST00000635214 MS4A1P11836 297 aa11.24□□□□□ -0.61
PATJ-216ENST00000635214 PLCB2Q00722 1185 aa11.24□□□□□ -0.61
PATJ-216ENST00000635214 RAB3GAP2Q9H2M9 1393 aa11.23□□□□□ -0.61
PATJ-216ENST00000635214 RGS3P49796 1198 aa11.23□□□□□ -0.61
PATJ-216ENST00000635214 ARAP3Q8WWN8 1544 aa11.23□□□□□ -0.61
PATJ-216ENST00000635214 HSCBQ8IWL3 235 aa11.23□□□□□ -0.61
PATJ-216ENST00000635214 ADGRL1O94910 1474 aa11.23□□□□□ -0.61
PATJ-216ENST00000635214 FTSJ3Q8IY81 847 aaKnown RBP11.22□□□□□ -0.61
PATJ-216ENST00000635214 CHGAP10645 457 aaKnown RBP11.21□□□□□ -0.61
PATJ-216ENST00000635214 SCAPERQ9BY12 1400 aa11.21□□□□□ -0.61
PATJ-216ENST00000635214 CNTLNQ9NXG0 1405 aa11.21□□□□□ -0.61
PATJ-216ENST00000635214 KANK4Q5T7N3 995 aaPredicted RBP11.21□□□□□ -0.61
PATJ-216ENST00000635214 RSPH6AQ9H0K4 717 aa11.21□□□□□ -0.61
PATJ-216ENST00000635214 ZNF518AQ6AHZ1 1483 aa11.21□□□□□ -0.62
PATJ-216ENST00000635214 CFAP53Q96M91 514 aa11.21□□□□□ -0.62
PATJ-216ENST00000635214 ERCC6L2Q5T890 1561 aa11.21□□□□□ -0.62
PATJ-216ENST00000635214 DIP2BQ9P265 1576 aa11.21□□□□□ -0.62
PATJ-216ENST00000635214 CFAP44Q96MT7 982 aa11.2□□□□□ -0.62
PATJ-216ENST00000635214 TSHZ2Q9NRE2 1034 aa11.2□□□□□ -0.62
PATJ-216ENST00000635214 MAP3K1Q13233 1512 aa11.2□□□□□ -0.62
PATJ-216ENST00000635214 KDM2AQ9Y2K7 1162 aa11.19□□□□□ -0.62
PATJ-216ENST00000635214 NUP153P49790 1475 aaKnown RBP11.19□□□□□ -0.62
PATJ-216ENST00000635214 KIAA2012Q0VF49 1180 aa11.19□□□□□ -0.62
PATJ-216ENST00000635214 TNNT3P45378 269 aaPredicted RBP11.19□□□□□ -0.62
PATJ-216ENST00000635214 CARD11Q9BXL7 1154 aa11.19□□□□□ -0.62
PATJ-216ENST00000635214 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.19□□□□□ -0.62
PATJ-216ENST00000635214 USP35Q9P2H5 1018 aa11.18□□□□□ -0.62
PATJ-216ENST00000635214 GBP4Q96PP9 640 aa11.18□□□□□ -0.62
PATJ-216ENST00000635214 TCERG1O14776 1098 aaKnown RBP11.17□□□□□ -0.62
PATJ-216ENST00000635214 MIA2Q96PC5 1412 aa11.17□□□□□ -0.62
PATJ-216ENST00000635214 KIAA1107Q9UPP5 1409 aa11.17□□□□□ -0.62
PATJ-216ENST00000635214 HSP90AA2PQ14568 343 aaPredicted RBP11.17□□□□□ -0.62
PATJ-216ENST00000635214 MYOM3Q5VTT5 1437 aa11.16□□□□□ -0.62
PATJ-216ENST00000635214 ROCK2O75116 1388 aaKnown RBP11.16□□□□□ -0.62
PATJ-216ENST00000635214 C9orf84Q5VXU9 1444 aa11.16□□□□□ -0.62
PATJ-216ENST00000635214 KNSTRNQ9Y448 316 aa11.15□□□□□ -0.62
PATJ-216ENST00000635214 GOLGA6L4A6NEF3 574 aa11.15□□□□□ -0.62
PATJ-216ENST00000635214 IPO9Q96P70 1041 aaKnown RBP11.15□□□□□ -0.62
PATJ-216ENST00000635214 ITSN2Q9NZM3 1697 aa11.15□□□□□ -0.62
PATJ-216ENST00000635214 GOLGA6L3A6NEY3 463 aa11.14□□□□□ -0.63
PATJ-216ENST00000635214 AMER1Q5JTC6 1135 aaPredicted RBP11.14□□□□□ -0.63
PATJ-216ENST00000635214 SUPT6HQ7KZ85 1726 aaKnown RBP11.14□□□□□ -0.63
PATJ-216ENST00000635214 ATP10AO60312 1499 aa11.13□□□□□ -0.63
PATJ-216ENST00000635214 LRRC9Q6ZRR7 1453 aa11.13□□□□□ -0.63
PATJ-216ENST00000635214 ZFYVE16Q7Z3T8 1539 aa11.13□□□□□ -0.63
PATJ-216ENST00000635214 DHX57Q6P158 1386 aaKnown RBP11.13□□□□□ -0.63
PATJ-216ENST00000635214 ABCA9Q8IUA7 1624 aa11.13□□□□□ -0.63
PATJ-216ENST00000635214 TMF1P82094 1093 aa11.13□□□□□ -0.63
PATJ-216ENST00000635214 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.13□□□□□ -0.63
PATJ-216ENST00000635214 RRBP1Q9P2E9 1410 aaKnown RBP11.12□□□□□ -0.63
PATJ-216ENST00000635214 MPHOSPH9Q99550 1183 aa11.12□□□□□ -0.63
PATJ-216ENST00000635214 MLECQ14165 292 aa11.12□□□□□ -0.63
PATJ-216ENST00000635214 PPP1R15AO75807 674 aaPredicted RBP11.12□□□□□ -0.63
PATJ-216ENST00000635214 SIN3AQ96ST3 1273 aa11.12□□□□□ -0.63
PATJ-216ENST00000635214 TPRNQ4KMQ1 711 aa11.11□□□□□ -0.63
PATJ-216ENST00000635214 DRC7Q8IY82 874 aa11.11□□□□□ -0.63
PATJ-216ENST00000635214 STAC3Q96MF2 364 aa11.1□□□□□ -0.63
PATJ-216ENST00000635214 EIF3AQ14152 1382 aaKnown RBP11.1□□□□□ -0.63
PATJ-216ENST00000635214 EID1Q9Y6B2 187 aa11.1□□□□□ -0.63
PATJ-216ENST00000635214 MCCP23508 829 aa11.1□□□□□ -0.63
PATJ-216ENST00000635214 SYAP1Q96A49 352 aaPredicted RBP11.1□□□□□ -0.63
PATJ-216ENST00000635214 RTEL1-TNFRSF6BF6WH68 1400 aa11.1□□□□□ -0.63
PATJ-216ENST00000635214 FGD6Q6ZV73 1430 aa11.1□□□□□ -0.63
PATJ-216ENST00000635214 FRAT1Q92837 279 aaPredicted RBP11.09□□□□□ -0.63
PATJ-216ENST00000635214 CDK13Q14004 1512 aaKnown RBP11.09□□□□□ -0.63
PATJ-216ENST00000635214 VSIG10Q8N0Z9 540 aa11.09□□□□□ -0.63
PATJ-216ENST00000635214 PCF11O94913 1555 aaKnown RBP11.09□□□□□ -0.63
PATJ-216ENST00000635214 NUDCQ9Y266 331 aa11.08□□□□□ -0.64
PATJ-216ENST00000635214 CCDC141Q6ZP82 1450 aa11.08□□□□□ -0.64
PATJ-216ENST00000635214 WASHC2CQ9Y4E1 1318 aa11.08□□□□□ -0.64
PATJ-216ENST00000635214 MYO5CQ9NQX4 1742 aa11.08□□□□□ -0.64
PATJ-216ENST00000635214 PLPPR3Q6T4P5 718 aa11.08□□□□□ -0.64
PATJ-216ENST00000635214 MAPK8IP3Q9UPT6 1336 aa11.08□□□□□ -0.64
PATJ-216ENST00000635214 MAP3K4Q9Y6R4 1608 aa11.08□□□□□ -0.64
PATJ-216ENST00000635214 RALBP1Q15311 655 aa11.07□□□□□ -0.64
PATJ-216ENST00000635214 NUP155O75694 1391 aa11.07□□□□□ -0.64
PATJ-216ENST00000635214 NCOA2Q15596 1464 aa11.07□□□□□ -0.64
PATJ-216ENST00000635214 PKD2Q13563 968 aa11.07□□□□□ -0.64
PATJ-216ENST00000635214 HNRNPMP52272 730 aaKnown RBP eCLIP11.06□□□□□ -0.64
PATJ-216ENST00000635214 RAPGEF3O95398 923 aa11.06□□□□□ -0.64
PATJ-216ENST00000635214 FGD1P98174 961 aa11.06□□□□□ -0.64
PATJ-216ENST00000635214 GGT6Q6P531 493 aa11.06□□□□□ -0.64
PATJ-216ENST00000635214 FAM135AQ9P2D6 1515 aa11.06□□□□□ -0.64
PATJ-216ENST00000635214 KIF3BO15066 747 aa11.05□□□□□ -0.64
PATJ-216ENST00000635214 TSPOAP1O95153 1857 aa11.05□□□□□ -0.64
PATJ-216ENST00000635214 TIAM1Q13009 1591 aa11.04□□□□□ -0.64
PATJ-216ENST00000635214 HSPA5P11021 654 aaKnown RBP11.04□□□□□ -0.64
PATJ-216ENST00000635214 THEMISQ8N1K5 641 aaPredicted RBP11.04□□□□□ -0.64
PATJ-216ENST00000635214 GZF1Q9H116 711 aaPredicted RBP11.04□□□□□ -0.64
PATJ-216ENST00000635214 KCNJ4P48050 445 aa11.04□□□□□ -0.64
PATJ-216ENST00000635214 RGL3Q3MIN7 710 aa11.04□□□□□ -0.64
PATJ-216ENST00000635214 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.04□□□□□ -0.64
PATJ-216ENST00000635214 KTN1Q86UP2 1357 aaKnown RBP11.03□□□□□ -0.64
PATJ-216ENST00000635214 SLKQ9H2G2 1235 aaPredicted RBP11.03□□□□□ -0.64
PATJ-216ENST00000635214 MLH3Q9UHC1 1453 aa11.03□□□□□ -0.64
PATJ-216ENST00000635214 DCAF11Q8TEB1 546 aa11.03□□□□□ -0.64
PATJ-216ENST00000635214 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.02□□□□□ -0.64
PATJ-216ENST00000635214 HTATSF1O43719 755 aaKnown RBP11.02□□□□□ -0.65
PATJ-216ENST00000635214 NEUROD2Q15784 382 aa11.02□□□□□ -0.65
PATJ-216ENST00000635214 GOLGA6L1Q8N7Z2 621 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms