RNA–Protein interactions for RNA: ENST00000635023.1

PATJ-214, Transcript of PATJ, crumbs cell polarity complex component, humanhuman

TSL 5

Gene PATJ, Length 5,242 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PATJ-214ENST00000635023 VSIG10Q8N0Z9 540 aa11.58□□□□□ -0.56
PATJ-214ENST00000635023 FRAT2O75474 233 aaPredicted RBP11.58□□□□□ -0.56
PATJ-214ENST00000635023 RDXP35241 583 aaKnown RBP11.57□□□□□ -0.56
PATJ-214ENST00000635023 ZCCHC6Q5VYS8 1495 aaKnown RBP11.57□□□□□ -0.56
PATJ-214ENST00000635023 DCAF11Q8TEB1 546 aa11.57□□□□□ -0.56
PATJ-214ENST00000635023 HSP90B2PQ58FF3 399 aa11.57□□□□□ -0.56
PATJ-214ENST00000635023 DDX49Q9Y6V7 483 aaKnown RBP11.57□□□□□ -0.56
PATJ-214ENST00000635023 PCMTD1Q96MG8 357 aaPredicted RBP11.56□□□□□ -0.56
PATJ-214ENST00000635023 SMC4Q9NTJ3 1288 aa11.56□□□□□ -0.56
PATJ-214ENST00000635023 PDE3BQ13370 1112 aa11.56□□□□□ -0.56
PATJ-214ENST00000635023 AMOTL1Q8IY63 956 aa11.56□□□□□ -0.56
PATJ-214ENST00000635023 TRIM29Q14134 588 aa11.55□□□□□ -0.56
PATJ-214ENST00000635023 CCDC173Q0VFZ6 552 aa11.55□□□□□ -0.56
PATJ-214ENST00000635023 CWC15Q9P013 229 aaKnown RBP11.54□□□□□ -0.56
PATJ-214ENST00000635023 HOMER1Q86YM7 354 aa11.54□□□□□ -0.56
PATJ-214ENST00000635023 CNKSR2Q8WXI2 1034 aa11.54□□□□□ -0.56
PATJ-214ENST00000635023 GOLGA3Q08378 1498 aa11.54□□□□□ -0.56
PATJ-214ENST00000635023 GTF2E1P29083 439 aaPredicted RBP11.54□□□□□ -0.56
PATJ-214ENST00000635023 ERCC4Q92889 916 aaPredicted RBP11.54□□□□□ -0.56
PATJ-214ENST00000635023 MYO6Q9UM54 1294 aa11.53□□□□□ -0.56
PATJ-214ENST00000635023 CTDP1Q9Y5B0 961 aaPredicted RBP11.53□□□□□ -0.56
PATJ-214ENST00000635023 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.53□□□□□ -0.56
PATJ-214ENST00000635023 MTERF4Q7Z6M4 381 aaKnown RBP11.53□□□□□ -0.56
PATJ-214ENST00000635023 WWC1Q8IX03 1113 aa11.53□□□□□ -0.56
PATJ-214ENST00000635023 MAP7D2Q96T17 732 aa11.53□□□□□ -0.56
PATJ-214ENST00000635023 NOL10Q9BSC4 688 aaKnown RBP11.53□□□□□ -0.56
PATJ-214ENST00000635023 RUFY2Q8WXA3 655 aa11.52□□□□□ -0.56
PATJ-214ENST00000635023 ODF2Q5BJF6 829 aa11.52□□□□□ -0.57
PATJ-214ENST00000635023 ZNF592Q92610 1267 aa11.52□□□□□ -0.57
PATJ-214ENST00000635023 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.52□□□□□ -0.57
PATJ-214ENST00000635023 CT47A1Q5JQC4 288 aaPredicted RBP11.52□□□□□ -0.57
PATJ-214ENST00000635023 NOL8Q76FK4 1167 aaKnown RBP11.52□□□□□ -0.57
PATJ-214ENST00000635023 MNS1Q8NEH6 495 aa11.52□□□□□ -0.57
PATJ-214ENST00000635023 ZRSR2Q15696 482 aaKnown RBP11.52□□□□□ -0.57
PATJ-214ENST00000635023 PHLDB1Q86UU1 1377 aa11.51□□□□□ -0.57
PATJ-214ENST00000635023 CCNB3Q8WWL7 1395 aa11.51□□□□□ -0.57
PATJ-214ENST00000635023 CENPJQ9HC77 1338 aaPredicted RBP11.51□□□□□ -0.57
PATJ-214ENST00000635023 FBXO3Q9UK99 471 aa11.51□□□□□ -0.57
PATJ-214ENST00000635023 ANO8Q9HCE9 1232 aaPredicted RBP11.5□□□□□ -0.57
PATJ-214ENST00000635023 TERF2IPQ9NYB0 399 aa11.5□□□□□ -0.57
PATJ-214ENST00000635023 PAK3O75914 559 aaPredicted RBP11.5□□□□□ -0.57
PATJ-214ENST00000635023 H0YHG0 523 aa11.5□□□□□ -0.57
PATJ-214ENST00000635023 ZKSCAN1P17029 563 aaPredicted RBP11.5□□□□□ -0.57
PATJ-214ENST00000635023 SIN3AQ96ST3 1273 aa11.5□□□□□ -0.57
PATJ-214ENST00000635023 EIF3AQ14152 1382 aaKnown RBP11.49□□□□□ -0.57
PATJ-214ENST00000635023 SLC4A10Q6U841 1118 aa11.49□□□□□ -0.57
PATJ-214ENST00000635023 NEXNQ0ZGT2 675 aa11.49□□□□□ -0.57
PATJ-214ENST00000635023 TRIM34Q9BYJ4 488 aa11.49□□□□□ -0.57
PATJ-214ENST00000635023 DIAPH3Q9NSV4 1193 aa11.49□□□□□ -0.57
PATJ-214ENST00000635023 GSE1Q14687 1217 aa11.49□□□□□ -0.57
PATJ-214ENST00000635023 CCDC43Q96MW1 224 aaKnown RBP11.49□□□□□ -0.57
PATJ-214ENST00000635023 FOXD4L1Q9NU39 408 aa11.49□□□□□ -0.57
PATJ-214ENST00000635023 CCDC66A2RUB6 948 aa11.48□□□□□ -0.57
PATJ-214ENST00000635023 R3HCC1Q9Y3T6 440 aaKnown RBP11.48□□□□□ -0.57
PATJ-214ENST00000635023 REC8O95072 547 aa11.48□□□□□ -0.57
PATJ-214ENST00000635023 CPLX1O14810 134 aa11.48□□□□□ -0.57
PATJ-214ENST00000635023 MCTP1Q6DN14 999 aa11.48□□□□□ -0.57
PATJ-214ENST00000635023 APPP05067 770 aa11.47□□□□□ -0.57
PATJ-214ENST00000635023 CEP162Q5TB80 1403 aa11.46□□□□□ -0.57
PATJ-214ENST00000635023 RNF20Q5VTR2 975 aa11.46□□□□□ -0.58
PATJ-214ENST00000635023 NAP1L1P55209 391 aaKnown RBP11.46□□□□□ -0.58
PATJ-214ENST00000635023 SAFB2Q14151 953 aaKnown RBP eCLIP11.45□□□□□ -0.58
PATJ-214ENST00000635023 CENPQQ7L2Z9 268 aaPredicted RBP11.45□□□□□ -0.58
PATJ-214ENST00000635023 CCDC9Q9Y3X0 531 aaKnown RBP11.45□□□□□ -0.58
PATJ-214ENST00000635023 OFD1O75665 1012 aa11.45□□□□□ -0.58
PATJ-214ENST00000635023 TRDNQ13061 729 aa11.45□□□□□ -0.58
PATJ-214ENST00000635023 SASS6Q6UVJ0 657 aa11.45□□□□□ -0.58
PATJ-214ENST00000635023 HSPA5P11021 654 aaKnown RBP11.45□□□□□ -0.58
PATJ-214ENST00000635023 FAM161AQ3B820 660 aa11.45□□□□□ -0.58
PATJ-214ENST00000635023 FOXD4L5Q5VV16 416 aaPredicted RBP11.45□□□□□ -0.58
PATJ-214ENST00000635023 BICD2Q8TD16 824 aa11.45□□□□□ -0.58
PATJ-214ENST00000635023 FOXD4L4Q8WXT5 416 aaPredicted RBP11.45□□□□□ -0.58
PATJ-214ENST00000635023 FAM13BQ9NYF5 915 aa11.45□□□□□ -0.58
PATJ-214ENST00000635023 SAFBQ15424 915 aaKnown RBP eCLIP11.44□□□□□ -0.58
PATJ-214ENST00000635023 HSP90AB2PQ58FF8 381 aa11.44□□□□□ -0.58
PATJ-214ENST00000635023 CCDC73Q6ZRK6 1079 aa11.44□□□□□ -0.58
PATJ-214ENST00000635023 RILPL2Q969X0 211 aa11.44□□□□□ -0.58
PATJ-214ENST00000635023 ANKRD18AQ8IVF6 992 aa11.43□□□□□ -0.58
PATJ-214ENST00000635023 NAT10Q9H0A0 1025 aaKnown RBP11.43□□□□□ -0.58
PATJ-214ENST00000635023 GOLGA6L7A0A1B0GV03 622 aa11.43□□□□□ -0.58
PATJ-214ENST00000635023 FAM43AQ8N2R8 423 aa11.43□□□□□ -0.58
PATJ-214ENST00000635023 STK26Q9P289 416 aa11.43□□□□□ -0.58
PATJ-214ENST00000635023 CCP110O43303 1012 aa11.43□□□□□ -0.58
PATJ-214ENST00000635023 NUCB2P80303 420 aa11.43□□□□□ -0.58
PATJ-214ENST00000635023 NLRP13Q86W25 1043 aa11.43□□□□□ -0.58
PATJ-214ENST00000635023 DHX8Q14562 1220 aaKnown RBP11.42□□□□□ -0.58
PATJ-214ENST00000635023 FHAD1B1AJZ9 1412 aa11.42□□□□□ -0.58
PATJ-214ENST00000635023 ERICH2A1L162 156 aa11.42□□□□□ -0.58
PATJ-214ENST00000635023 CLUAP1Q96AJ1 413 aa11.42□□□□□ -0.58
PATJ-214ENST00000635023 CHMP5Q9NZZ3 219 aa11.42□□□□□ -0.58
PATJ-214ENST00000635023 ROCK2O75116 1388 aaKnown RBP11.41□□□□□ -0.58
PATJ-214ENST00000635023 SCRIBQ14160 1630 aa11.41□□□□□ -0.58
PATJ-214ENST00000635023 DHX16O60231 1041 aaKnown RBP11.41□□□□□ -0.58
PATJ-214ENST00000635023 AMPHP49418 695 aa11.41□□□□□ -0.58
PATJ-214ENST00000635023 CAGE1Q8TC20 777 aa11.41□□□□□ -0.58
PATJ-214ENST00000635023 IFT57Q9NWB7 429 aa11.41□□□□□ -0.58
PATJ-214ENST00000635023 KIF27Q86VH2 1401 aa11.41□□□□□ -0.58
PATJ-214ENST00000635023 OLFM4Q6UX06 510 aa11.41□□□□□ -0.58
PATJ-214ENST00000635023 ERLIN2O94905 339 aa11.4□□□□□ -0.58
PATJ-214ENST00000635023 EPS15P42566 896 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms