RNA–Protein interactions for RNA: ENST00000632331.1

LINC01090-203, Transcript of long intergenic non-protein coding RNA 1090, humanhuman

TSL 5 BASIC

Gene LINC01090, Length 466 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01090-203ENST00000632331 PTPN5P54829 565 aa9.71□□□□□ -0.86
LINC01090-203ENST00000632331 RBM33Q96EV2 1170 aaKnown RBP9.71□□□□□ -0.86
LINC01090-203ENST00000632331 PPP1R3GB7ZBB8 358 aa9.69□□□□□ -0.86
LINC01090-203ENST00000632331 E2F4Q16254 413 aa9.69□□□□□ -0.86
LINC01090-203ENST00000632331 NBPF3Q9H094 633 aa9.69□□□□□ -0.86
LINC01090-203ENST00000632331 PLA2G2EQ9NZK7 142 aa9.69□□□□□ -0.86
LINC01090-203ENST00000632331 COL9A1P20849 921 aa9.68□□□□□ -0.86
LINC01090-203ENST00000632331 EPAS1Q99814 870 aa9.68□□□□□ -0.86
LINC01090-203ENST00000632331 PROX2Q3B8N5 592 aa9.67□□□□□ -0.86
LINC01090-203ENST00000632331 WNT2BQ93097 391 aa9.67□□□□□ -0.86
LINC01090-203ENST00000632331 BHMG1C9JSJ3 638 aaPredicted RBP9.66□□□□□ -0.86
LINC01090-203ENST00000632331 C6orf132Q5T0Z8 1188 aa9.66□□□□□ -0.86
LINC01090-203ENST00000632331 NBR1Q14596 966 aa9.65□□□□□ -0.86
LINC01090-203ENST00000632331 SPDYE16A6NNV3 312 aaPredicted RBP9.63□□□□□ -0.87
LINC01090-203ENST00000632331 MAP3K7O43318 606 aa9.63□□□□□ -0.87
LINC01090-203ENST00000632331 PDIA6Q15084 440 aa9.63□□□□□ -0.87
LINC01090-203ENST00000632331 RABGEF1Q9UJ41 708 aa9.63□□□□□ -0.87
LINC01090-203ENST00000632331 GRXCR2A6NFK2 248 aa9.62□□□□□ -0.87
LINC01090-203ENST00000632331 KIAA1468Q9P260 1216 aa9.62□□□□□ -0.87
LINC01090-203ENST00000632331 THSD4Q6ZMP0 1018 aa9.61□□□□□ -0.87
LINC01090-203ENST00000632331 ANKK1Q8NFD2 765 aa9.59□□□□□ -0.87
LINC01090-203ENST00000632331 EN1Q05925 392 aaPredicted RBP9.58□□□□□ -0.88
LINC01090-203ENST00000632331 TSR1Q2NL82 804 aaKnown RBP9.58□□□□□ -0.88
LINC01090-203ENST00000632331 TSHZ2Q9NRE2 1034 aa9.58□□□□□ -0.88
LINC01090-203ENST00000632331 SEPT9Q9UHD8 586 aaPredicted RBP9.57□□□□□ -0.88
LINC01090-203ENST00000632331 TRIM6-TRIM34B2RNG4 842 aa9.56□□□□□ -0.88
LINC01090-203ENST00000632331 BCAMP50895 628 aa9.54□□□□□ -0.88
LINC01090-203ENST00000632331 LAPTM4BQ86VI4 370 aa9.54□□□□□ -0.88
LINC01090-203ENST00000632331 ONECUT3O60422 494 aaPredicted RBP9.53□□□□□ -0.88
LINC01090-203ENST00000632331 PACS2Q86VP3 889 aa9.53□□□□□ -0.88
LINC01090-203ENST00000632331 ZFRQ96KR1 1074 aaKnown RBP9.53□□□□□ -0.88
LINC01090-203ENST00000632331 ARIH1Q9Y4X5 557 aaPredicted RBP9.53□□□□□ -0.88
LINC01090-203ENST00000632331 FAM98CQ17RN3 349 aaKnown RBP9.5□□□□□ -0.89
LINC01090-203ENST00000632331 CDCA7LQ96GN5 454 aa9.5□□□□□ -0.89
LINC01090-203ENST00000632331 SOWAHBA6NEL2 793 aa9.49□□□□□ -0.89
LINC01090-203ENST00000632331 PRIM1P49642 420 aaKnown RBP9.49□□□□□ -0.89
LINC01090-203ENST00000632331 TSKSQ9UJT2 592 aa9.49□□□□□ -0.89
LINC01090-203ENST00000632331 OSBPP22059 807 aa9.48□□□□□ -0.89
LINC01090-203ENST00000632331 PRSS12P56730 875 aa9.47□□□□□ -0.89
LINC01090-203ENST00000632331 CERKQ8TCT0 537 aa9.47□□□□□ -0.89
LINC01090-203ENST00000632331 LRCH3Q96II8 777 aa9.47□□□□□ -0.89
LINC01090-203ENST00000632331 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.47□□□□□ -0.89
LINC01090-203ENST00000632331 SMAPO00193 183 aa9.46□□□□□ -0.9
LINC01090-203ENST00000632331 WBP1LQ9NX94 342 aa9.46□□□□□ -0.9
LINC01090-203ENST00000632331 CDHR5Q9HBB8 845 aa9.45□□□□□ -0.9
LINC01090-203ENST00000632331 KCNV2Q8TDN2 545 aa9.44□□□□□ -0.9
LINC01090-203ENST00000632331 ARHGEF1Q92888 912 aaKnown RBP9.44□□□□□ -0.9
LINC01090-203ENST00000632331 HPS5Q9UPZ3 1129 aa9.44□□□□□ -0.9
LINC01090-203ENST00000632331 TSR3Q9UJK0 312 aaKnown RBP9.43□□□□□ -0.9
LINC01090-203ENST00000632331 PNMA3Q9UL41 463 aa9.43□□□□□ -0.9
LINC01090-203ENST00000632331 NBPF26B4DH59 902 aa9.42□□□□□ -0.9
LINC01090-203ENST00000632331 TATDN2Q93075 761 aa9.42□□□□□ -0.9
LINC01090-203ENST00000632331 HDGFP51858 240 aaKnown RBP9.41□□□□□ -0.9
LINC01090-203ENST00000632331 PPP4CP60510 307 aa9.41□□□□□ -0.9
LINC01090-203ENST00000632331 NYAP1Q6ZVC0 841 aa9.41□□□□□ -0.9
LINC01090-203ENST00000632331 FAM198AQ9UFP1 575 aa9.41□□□□□ -0.9
LINC01090-203ENST00000632331 RNF40O75150 1001 aa9.4□□□□□ -0.9
LINC01090-203ENST00000632331 MLLT3P42568 568 aaPredicted RBP9.4□□□□□ -0.9
LINC01090-203ENST00000632331 NUDT18Q6ZVK8 323 aa9.4□□□□□ -0.9
LINC01090-203ENST00000632331 SAMD7Q7Z3H4 446 aa9.4□□□□□ -0.9
LINC01090-203ENST00000632331 IFFO2Q5TF58 517 aa9.38□□□□□ -0.91
LINC01090-203ENST00000632331 C3orf80F5H4A9 247 aa9.37□□□□□ -0.91
LINC01090-203ENST00000632331 P3H3Q8IVL6 736 aa9.37□□□□□ -0.91
LINC01090-203ENST00000632331 A0A0G2JS52 829 aa9.36□□□□□ -0.91
LINC01090-203ENST00000632331 KCNC4Q03721 635 aa9.36□□□□□ -0.91
LINC01090-203ENST00000632331 PADI6Q6TGC4 694 aa9.36□□□□□ -0.91
LINC01090-203ENST00000632331 ITGBL1O95965 494 aaPredicted RBP9.35□□□□□ -0.91
LINC01090-203ENST00000632331 PLCB2Q00722 1185 aa9.35□□□□□ -0.91
LINC01090-203ENST00000632331 NPDC1Q9NQX5 325 aaPredicted RBP9.35□□□□□ -0.91
LINC01090-203ENST00000632331 RBM27Q9P2N5 1060 aaKnown RBP9.35□□□□□ -0.91
LINC01090-203ENST00000632331 NUTM2FA1L443 756 aa9.34□□□□□ -0.91
LINC01090-203ENST00000632331 SEMA3EO15041 775 aa9.31□□□□□ -0.92
LINC01090-203ENST00000632331 RGS20O76081 388 aa9.3□□□□□ -0.92
LINC01090-203ENST00000632331 SLC4A3P48751 1232 aa9.3□□□□□ -0.92
LINC01090-203ENST00000632331 HAP1P54257 671 aaPredicted RBP9.3□□□□□ -0.92
LINC01090-203ENST00000632331 SWT1Q5T5J6 900 aaKnown RBP9.29□□□□□ -0.92
LINC01090-203ENST00000632331 TTC13Q8NBP0 860 aa9.29□□□□□ -0.92
LINC01090-203ENST00000632331 PTGDRQ13258 359 aa9.28□□□□□ -0.92
LINC01090-203ENST00000632331 SLF2Q8IX21 1173 aa9.27□□□□□ -0.93
LINC01090-203ENST00000632331 NECTIN2Q92692 538 aa9.25□□□□□ -0.93
LINC01090-203ENST00000632331 EYA1Q99502 592 aa9.25□□□□□ -0.93
LINC01090-203ENST00000632331 MTRQ99707 1265 aa9.25□□□□□ -0.93
LINC01090-203ENST00000632331 IRX2Q9BZI1 471 aaPredicted RBP9.25□□□□□ -0.93
LINC01090-203ENST00000632331 APLP1P51693 650 aa9.24□□□□□ -0.93
LINC01090-203ENST00000632331 FAM161AQ3B820 660 aa9.24□□□□□ -0.93
LINC01090-203ENST00000632331 TJAP1Q5JTD0 557 aa9.24□□□□□ -0.93
LINC01090-203ENST00000632331 RBM46Q8TBY0 533 aaKnown RBP9.24□□□□□ -0.93
LINC01090-203ENST00000632331 FCHSD2O94868 740 aa9.23□□□□□ -0.93
LINC01090-203ENST00000632331 IL21Q9HBE4 155 aa9.23□□□□□ -0.93
LINC01090-203ENST00000632331 SMYD5Q6GMV2 418 aa9.22□□□□□ -0.93
LINC01090-203ENST00000632331 COPS2P61201 443 aa9.21□□□□□ -0.94
LINC01090-203ENST00000632331 DNAJB2P25686 324 aa9.2□□□□□ -0.94
LINC01090-203ENST00000632331 RBM26Q5T8P6 1007 aaKnown RBP9.2□□□□□ -0.94
LINC01090-203ENST00000632331 ZNF516Q92618 1163 aa9.2□□□□□ -0.94
LINC01090-203ENST00000632331 ADGRG1Q9Y653 693 aa9.2□□□□□ -0.94
LINC01090-203ENST00000632331 TESPA1A2RU30 521 aaPredicted RBP9.17□□□□□ -0.94
LINC01090-203ENST00000632331 RCCD1A6NED2 376 aa9.17□□□□□ -0.94
LINC01090-203ENST00000632331 PRR14Q9BWN1 585 aa9.17□□□□□ -0.94
LINC01090-203ENST00000632331 TMEM134Q9H6X4 195 aa9.16□□□□□ -0.94
LINC01090-203ENST00000632331 PPP1R18Q6NYC8 613 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms