RNA–Protein interactions for RNA: ENST00000629960.2

LINC01828-211, Transcript of long intergenic non-protein coding RNA 1828, humanhuman

TSL 5

Gene LINC01828, Length 345 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01828-211ENST00000629960 KCNV2Q8TDN2 545 aa11.86□□□□□ -0.51
LINC01828-211ENST00000629960 EPAS1Q99814 870 aa11.86□□□□□ -0.51
LINC01828-211ENST00000629960 SLC4A5Q9BY07 1137 aa11.86□□□□□ -0.51
LINC01828-211ENST00000629960 PRIM1P49642 420 aaKnown RBP11.85□□□□□ -0.51
LINC01828-211ENST00000629960 KCNH8Q96L42 1107 aa11.85□□□□□ -0.51
LINC01828-211ENST00000629960 C6orf132Q5T0Z8 1188 aa11.83□□□□□ -0.52
LINC01828-211ENST00000629960 RBM33Q96EV2 1170 aaKnown RBP11.83□□□□□ -0.52
LINC01828-211ENST00000629960 BHMG1C9JSJ3 638 aaPredicted RBP11.82□□□□□ -0.52
LINC01828-211ENST00000629960 NBR1Q14596 966 aa11.81□□□□□ -0.52
LINC01828-211ENST00000629960 GRXCR2A6NFK2 248 aa11.8□□□□□ -0.52
LINC01828-211ENST00000629960 PPP1R3GB7ZBB8 358 aa11.8□□□□□ -0.52
LINC01828-211ENST00000629960 PROX2Q3B8N5 592 aa11.8□□□□□ -0.52
LINC01828-211ENST00000629960 ARHGEF1Q92888 912 aaKnown RBP11.8□□□□□ -0.52
LINC01828-211ENST00000629960 EN1Q05925 392 aaPredicted RBP11.79□□□□□ -0.52
LINC01828-211ENST00000629960 TSR1Q2NL82 804 aaKnown RBP11.79□□□□□ -0.52
LINC01828-211ENST00000629960 OSBPP22059 807 aa11.77□□□□□ -0.53
LINC01828-211ENST00000629960 HAP1P54257 671 aaPredicted RBP11.77□□□□□ -0.53
LINC01828-211ENST00000629960 KDM2AQ9Y2K7 1162 aa11.76□□□□□ -0.53
LINC01828-211ENST00000629960 MAP3K7O43318 606 aa11.74□□□□□ -0.53
LINC01828-211ENST00000629960 MLLT3P42568 568 aaPredicted RBP11.73□□□□□ -0.53
LINC01828-211ENST00000629960 KCTD12Q96CX2 325 aaKnown RBP11.71□□□□□ -0.53
LINC01828-211ENST00000629960 RABGEF1Q9UJ41 708 aa11.71□□□□□ -0.53
LINC01828-211ENST00000629960 STAC3Q96MF2 364 aa11.7□□□□□ -0.54
LINC01828-211ENST00000629960 CDHR5Q9HBB8 845 aa11.7□□□□□ -0.54
LINC01828-211ENST00000629960 KIAA1468Q9P260 1216 aa11.69□□□□□ -0.54
LINC01828-211ENST00000629960 TRIM6-TRIM34B2RNG4 842 aa11.67□□□□□ -0.54
LINC01828-211ENST00000629960 ONECUT3O60422 494 aaPredicted RBP11.67□□□□□ -0.54
LINC01828-211ENST00000629960 P3H3Q8IVL6 736 aa11.67□□□□□ -0.54
LINC01828-211ENST00000629960 MRPL50Q8N5N7 158 aaKnown RBP11.67□□□□□ -0.54
LINC01828-211ENST00000629960 TSKSQ9UJT2 592 aa11.67□□□□□ -0.54
LINC01828-211ENST00000629960 FAM198AQ9UFP1 575 aa11.66□□□□□ -0.54
LINC01828-211ENST00000629960 SEMA3EO15041 775 aa11.65□□□□□ -0.54
LINC01828-211ENST00000629960 NBPF3Q9H094 633 aa11.65□□□□□ -0.54
LINC01828-211ENST00000629960 NPDC1Q9NQX5 325 aaPredicted RBP11.65□□□□□ -0.54
LINC01828-211ENST00000629960 HCSTQ9UBK5 93 aa11.64□□□□□ -0.55
LINC01828-211ENST00000629960 C3orf80F5H4A9 247 aa11.63□□□□□ -0.55
LINC01828-211ENST00000629960 CDCA7LQ96GN5 454 aa11.62□□□□□ -0.55
LINC01828-211ENST00000629960 SEPT9Q9UHD8 586 aaPredicted RBP11.62□□□□□ -0.55
LINC01828-211ENST00000629960 PRSS12P56730 875 aa11.61□□□□□ -0.55
LINC01828-211ENST00000629960 THSD4Q6ZMP0 1018 aa11.61□□□□□ -0.55
LINC01828-211ENST00000629960 WNT2BQ93097 391 aa11.61□□□□□ -0.55
LINC01828-211ENST00000629960 GOLGA8CPA6NN73 597 aa11.59□□□□□ -0.55
LINC01828-211ENST00000629960 PTPN5P54829 565 aa11.59□□□□□ -0.55
LINC01828-211ENST00000629960 CERKQ8TCT0 537 aa11.59□□□□□ -0.55
LINC01828-211ENST00000629960 LAPTM4BQ86VI4 370 aa11.58□□□□□ -0.56
LINC01828-211ENST00000629960 VSIG10Q8N0Z9 540 aa11.58□□□□□ -0.56
LINC01828-211ENST00000629960 ZFRQ96KR1 1074 aaKnown RBP11.57□□□□□ -0.56
LINC01828-211ENST00000629960 SMAPO00193 183 aa11.56□□□□□ -0.56
LINC01828-211ENST00000629960 PACS2Q86VP3 889 aa11.56□□□□□ -0.56
LINC01828-211ENST00000629960 TTC13Q8NBP0 860 aa11.56□□□□□ -0.56
LINC01828-211ENST00000629960 TESPA1A2RU30 521 aaPredicted RBP11.55□□□□□ -0.56
LINC01828-211ENST00000629960 BCAMP50895 628 aa11.54□□□□□ -0.56
LINC01828-211ENST00000629960 FAM98CQ17RN3 349 aaKnown RBP11.54□□□□□ -0.56
LINC01828-211ENST00000629960 PADI6Q6TGC4 694 aa11.53□□□□□ -0.56
LINC01828-211ENST00000629960 PTGDRQ13258 359 aa11.52□□□□□ -0.57
LINC01828-211ENST00000629960 ANKK1Q8NFD2 765 aa11.52□□□□□ -0.57
LINC01828-211ENST00000629960 TATDN2Q93075 761 aa11.52□□□□□ -0.57
LINC01828-211ENST00000629960 RBM27Q9P2N5 1060 aaKnown RBP11.52□□□□□ -0.57
LINC01828-211ENST00000629960 SOWAHBA6NEL2 793 aa11.51□□□□□ -0.57
LINC01828-211ENST00000629960 PNMA3Q9UL41 463 aa11.5□□□□□ -0.57
LINC01828-211ENST00000629960 NUDT18Q6ZVK8 323 aa11.49□□□□□ -0.57
LINC01828-211ENST00000629960 RBM26Q5T8P6 1007 aaKnown RBP11.48□□□□□ -0.57
LINC01828-211ENST00000629960 PLA2G2EQ9NZK7 142 aa11.48□□□□□ -0.57
LINC01828-211ENST00000629960 NUTM2FA1L443 756 aa11.47□□□□□ -0.57
LINC01828-211ENST00000629960 NBPF26B4DH59 902 aa11.46□□□□□ -0.57
LINC01828-211ENST00000629960 WBP1LQ9NX94 342 aa11.45□□□□□ -0.58
LINC01828-211ENST00000629960 SAMD7Q7Z3H4 446 aa11.44□□□□□ -0.58
LINC01828-211ENST00000629960 EYA1Q99502 592 aa11.44□□□□□ -0.58
LINC01828-211ENST00000629960 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.44□□□□□ -0.58
LINC01828-211ENST00000629960 LRCH3Q96II8 777 aa11.42□□□□□ -0.58
LINC01828-211ENST00000629960 HPS5Q9UPZ3 1129 aa11.41□□□□□ -0.58
LINC01828-211ENST00000629960 GPR37O15354 613 aa11.4□□□□□ -0.58
LINC01828-211ENST00000629960 FAM161AQ3B820 660 aa11.4□□□□□ -0.58
LINC01828-211ENST00000629960 TSR3Q9UJK0 312 aaKnown RBP11.4□□□□□ -0.58
LINC01828-211ENST00000629960 FCHSD2O94868 740 aa11.39□□□□□ -0.59
LINC01828-211ENST00000629960 SMYD5Q6GMV2 418 aa11.39□□□□□ -0.59
LINC01828-211ENST00000629960 ADGRG1Q9Y653 693 aa11.38□□□□□ -0.59
LINC01828-211ENST00000629960 FECHP22830 423 aa11.37□□□□□ -0.59
LINC01828-211ENST00000629960 SWT1Q5T5J6 900 aaKnown RBP11.35□□□□□ -0.59
LINC01828-211ENST00000629960 HIC1Q14526 733 aa11.34□□□□□ -0.59
LINC01828-211ENST00000629960 PPP4CP60510 307 aa11.33□□□□□ -0.6
LINC01828-211ENST00000629960 NYAP1Q6ZVC0 841 aa11.33□□□□□ -0.6
LINC01828-211ENST00000629960 IFFO2Q5TF58 517 aa11.32□□□□□ -0.6
LINC01828-211ENST00000629960 ITGBL1O95965 494 aaPredicted RBP11.31□□□□□ -0.6
LINC01828-211ENST00000629960 GNPATO15228 680 aa11.3□□□□□ -0.6
LINC01828-211ENST00000629960 RBM46Q8TBY0 533 aaKnown RBP11.3□□□□□ -0.6
LINC01828-211ENST00000629960 RCCD1A6NED2 376 aa11.29□□□□□ -0.6
LINC01828-211ENST00000629960 RNF40O75150 1001 aa11.28□□□□□ -0.6
LINC01828-211ENST00000629960 HDGFP51858 240 aaKnown RBP11.28□□□□□ -0.6
LINC01828-211ENST00000629960 PXYLP1Q8TE99 480 aa11.28□□□□□ -0.6
LINC01828-211ENST00000629960 DNAJB2P25686 324 aa11.27□□□□□ -0.61
LINC01828-211ENST00000629960 APLP1P51693 650 aa11.27□□□□□ -0.61
LINC01828-211ENST00000629960 GPIHBP1Q8IV16 184 aa11.27□□□□□ -0.61
LINC01828-211ENST00000629960 TMEM134Q9H6X4 195 aa11.27□□□□□ -0.61
LINC01828-211ENST00000629960 TJAP1Q5JTD0 557 aa11.25□□□□□ -0.61
LINC01828-211ENST00000629960 METTL3Q86U44 580 aaKnown RBP11.25□□□□□ -0.61
LINC01828-211ENST00000629960 SLF2Q8IX21 1173 aa11.24□□□□□ -0.61
LINC01828-211ENST00000629960 OATP04181 439 aa11.23□□□□□ -0.61
LINC01828-211ENST00000629960 A0A0G2JS52 829 aa11.22□□□□□ -0.61
LINC01828-211ENST00000629960 KCNC4Q03721 635 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms