RNA–Protein interactions for RNA: ENST00000629912.1

NEK3-211, Transcript of NIMA related kinase 3, humanhuman

TSL 5 BASIC

Gene NEK3, Length 141 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-211ENST00000629912 ZFYVE16Q7Z3T8 1539 aa7.8□□□□□ -1.16
NEK3-211ENST00000629912 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.8□□□□□ -1.16
NEK3-211ENST00000629912 ARID4BQ4LE39 1312 aaPredicted RBP7.79□□□□□ -1.16
NEK3-211ENST00000629912 ATP7AQ04656 1500 aa7.79□□□□□ -1.16
NEK3-211ENST00000629912 DEPDC5O75140 1603 aa7.79□□□□□ -1.16
NEK3-211ENST00000629912 ANP32CO43423 234 aa7.79□□□□□ -1.16
NEK3-211ENST00000629912 STAC3Q96MF2 364 aa7.79□□□□□ -1.16
NEK3-211ENST00000629912 CCDC144AA2RUR9 1427 aa7.78□□□□□ -1.16
NEK3-211ENST00000629912 EIF2AK4Q9P2K8 1649 aaKnown RBP7.78□□□□□ -1.16
NEK3-211ENST00000629912 POLR1AO95602 1720 aaPredicted RBP7.78□□□□□ -1.16
NEK3-211ENST00000629912 C11orf95C9JLR9 678 aaPredicted RBP7.78□□□□□ -1.16
NEK3-211ENST00000629912 CCDC7Q96M83 1385 aa7.78□□□□□ -1.16
NEK3-211ENST00000629912 RALGAPBQ86X10 1494 aa7.78□□□□□ -1.16
NEK3-211ENST00000629912 VWDEQ8N2E2 1590 aa7.78□□□□□ -1.16
NEK3-211ENST00000629912 PTPRTO14522 1441 aa7.78□□□□□ -1.16
NEK3-211ENST00000629912 SCAF1Q9H7N4 1312 aaKnown RBP7.78□□□□□ -1.16
NEK3-211ENST00000629912 KIDINS220Q9ULH0 1771 aa7.77□□□□□ -1.17
NEK3-211ENST00000629912 ZNF518AQ6AHZ1 1483 aa7.77□□□□□ -1.17
NEK3-211ENST00000629912 NEO1Q92859 1461 aa7.77□□□□□ -1.17
NEK3-211ENST00000629912 MLH3Q9UHC1 1453 aa7.77□□□□□ -1.17
NEK3-211ENST00000629912 KANK1Q14678 1352 aa7.77□□□□□ -1.17
NEK3-211ENST00000629912 DCAF11Q8TEB1 546 aa7.77□□□□□ -1.17
NEK3-211ENST00000629912 YTHDC1Q96MU7 727 aaKnown RBP7.77□□□□□ -1.17
NEK3-211ENST00000629912 GLI2P10070 1586 aa7.76□□□□□ -1.17
NEK3-211ENST00000629912 TET3O43151 1660 aa7.76□□□□□ -1.17
NEK3-211ENST00000629912 KDM5CP41229 1560 aa7.76□□□□□ -1.17
NEK3-211ENST00000629912 KIF3BO15066 747 aa7.75□□□□□ -1.17
NEK3-211ENST00000629912 KDM2AQ9Y2K7 1162 aa7.75□□□□□ -1.17
NEK3-211ENST00000629912 E9PCH4 1651 aa7.75□□□□□ -1.17
NEK3-211ENST00000629912 USP47Q96K76 1375 aa7.74□□□□□ -1.17
NEK3-211ENST00000629912 CYB5RLQ6IPT4 315 aa7.74□□□□□ -1.17
NEK3-211ENST00000629912 CARD11Q9BXL7 1154 aa7.74□□□□□ -1.17
NEK3-211ENST00000629912 MYT1LQ9UL68 1186 aa7.74□□□□□ -1.17
NEK3-211ENST00000629912 POGZQ7Z3K3 1410 aa7.74□□□□□ -1.17
NEK3-211ENST00000629912 PRAG1Q86YV5 1406 aa7.74□□□□□ -1.17
NEK3-211ENST00000629912 CNTLNQ9NXG0 1405 aa7.74□□□□□ -1.17
NEK3-211ENST00000629912 NEURL4Q96JN8 1562 aa7.74□□□□□ -1.17
NEK3-211ENST00000629912 BCORL1Q5H9F3 1711 aa7.74□□□□□ -1.17
NEK3-211ENST00000629912 KIF7Q2M1P5 1343 aa7.74□□□□□ -1.17
NEK3-211ENST00000629912 A2MP01023 1474 aa7.74□□□□□ -1.17
NEK3-211ENST00000629912 RIMBP3CA6NJZ7 1639 aa7.74□□□□□ -1.17
NEK3-211ENST00000629912 RIMBP3BA6NNM3 1639 aa7.74□□□□□ -1.17
NEK3-211ENST00000629912 RIMBP3Q9UFD9 1639 aa7.74□□□□□ -1.17
NEK3-211ENST00000629912 TRPM2O94759 1503 aa7.73□□□□□ -1.17
NEK3-211ENST00000629912 LMTK2Q8IWU2 1503 aa7.73□□□□□ -1.17
NEK3-211ENST00000629912 GPRASP1Q5JY77 1395 aa7.73□□□□□ -1.17
NEK3-211ENST00000629912 SPHKAPQ2M3C7 1700 aa7.73□□□□□ -1.17
NEK3-211ENST00000629912 LAMC1P11047 1609 aa7.73□□□□□ -1.17
NEK3-211ENST00000629912 TRPM1Q7Z4N2 1603 aa7.73□□□□□ -1.17
NEK3-211ENST00000629912 MROH1Q8NDA8 1641 aa7.73□□□□□ -1.17
NEK3-211ENST00000629912 MAP3K4Q9Y6R4 1608 aa7.73□□□□□ -1.17
NEK3-211ENST00000629912 PRDM15P57071 1507 aaPredicted RBP7.73□□□□□ -1.17
NEK3-211ENST00000629912 RNF17Q9BXT8 1623 aaKnown RBP7.72□□□□□ -1.17
NEK3-211ENST00000629912 RGL3Q3MIN7 710 aa7.72□□□□□ -1.17
NEK3-211ENST00000629912 ZNF326Q5BKZ1 582 aaKnown RBP7.72□□□□□ -1.17
NEK3-211ENST00000629912 POTEDQ86YR6 584 aa7.72□□□□□ -1.17
NEK3-211ENST00000629912 CEP152O94986 1710 aa7.72□□□□□ -1.17
NEK3-211ENST00000629912 ROCK2O75116 1388 aaKnown RBP7.71□□□□□ -1.17
NEK3-211ENST00000629912 GTF3C3Q9Y5Q9 886 aa7.71□□□□□ -1.18
NEK3-211ENST00000629912 HECW2Q9P2P5 1572 aa7.71□□□□□ -1.18
NEK3-211ENST00000629912 ST20-MTHFSA0A0A6YYL1 179 aa7.7□□□□□ -1.18
NEK3-211ENST00000629912 PRKRIP1Q9H875 184 aaPredicted RBP7.7□□□□□ -1.18
NEK3-211ENST00000629912 RICTORQ6R327 1708 aa7.69□□□□□ -1.18
NEK3-211ENST00000629912 FRMPD1Q5SYB0 1578 aa7.69□□□□□ -1.18
NEK3-211ENST00000629912 NBPF1Q3BBV0 1214 aa7.69□□□□□ -1.18
NEK3-211ENST00000629912 CLTCL1P53675 1640 aa7.69□□□□□ -1.18
NEK3-211ENST00000629912 EFCAB6Q5THR3 1501 aa7.68□□□□□ -1.18
NEK3-211ENST00000629912 RAPGEF3O95398 923 aa7.68□□□□□ -1.18
NEK3-211ENST00000629912 KIAA1210Q9ULL0 1709 aa7.68□□□□□ -1.18
NEK3-211ENST00000629912 KIF1BO60333 1816 aa7.68□□□□□ -1.18
NEK3-211ENST00000629912 ABCA6Q8N139 1617 aa7.67□□□□□ -1.18
NEK3-211ENST00000629912 FAM69CQ0P6D2 419 aa7.67□□□□□ -1.18
NEK3-211ENST00000629912 DIP2BQ9P265 1576 aa7.67□□□□□ -1.18
NEK3-211ENST00000629912 PPRC1Q5VV67 1664 aaKnown RBP7.67□□□□□ -1.18
NEK3-211ENST00000629912 SLC24A1O60721 1099 aa7.66□□□□□ -1.18
NEK3-211ENST00000629912 TESK2Q96S53 571 aa7.66□□□□□ -1.18
NEK3-211ENST00000629912 PPP6R1Q9UPN7 881 aa7.66□□□□□ -1.18
NEK3-211ENST00000629912 RPGRIP1LQ68CZ1 1315 aa7.66□□□□□ -1.18
NEK3-211ENST00000629912 ARHGAP31Q2M1Z3 1444 aa7.66□□□□□ -1.18
NEK3-211ENST00000629912 DIP2CQ9Y2E4 1556 aa7.66□□□□□ -1.18
NEK3-211ENST00000629912 MADDQ8WXG6 1647 aa7.66□□□□□ -1.18
NEK3-211ENST00000629912 ZMYM4Q5VZL5 1548 aa7.65□□□□□ -1.18
NEK3-211ENST00000629912 GGT6Q6P531 493 aa7.65□□□□□ -1.18
NEK3-211ENST00000629912 KTN1Q86UP2 1357 aaKnown RBP7.65□□□□□ -1.18
NEK3-211ENST00000629912 WASHC2CQ9Y4E1 1318 aa7.65□□□□□ -1.18
NEK3-211ENST00000629912 CFAP65Q6ZU64 1925 aaKnown RBP7.64□□□□□ -1.19
NEK3-211ENST00000629912 ABCC3O15438 1527 aa7.64□□□□□ -1.19
NEK3-211ENST00000629912 MYOM2P54296 1465 aa7.64□□□□□ -1.19
NEK3-211ENST00000629912 NOS1P29475 1434 aa7.64□□□□□ -1.19
NEK3-211ENST00000629912 IFT172Q9UG01 1749 aa7.64□□□□□ -1.19
NEK3-211ENST00000629912 IQGAP1P46940 1657 aa7.63□□□□□ -1.19
NEK3-211ENST00000629912 NRXN1Q9ULB1 1477 aa7.63□□□□□ -1.19
NEK3-211ENST00000629912 NPATQ14207 1427 aa7.63□□□□□ -1.19
NEK3-211ENST00000629912 TMF1P82094 1093 aa7.63□□□□□ -1.19
NEK3-211ENST00000629912 RALBP1Q15311 655 aa7.63□□□□□ -1.19
NEK3-211ENST00000629912 ZC3H13Q5T200 1668 aaKnown RBP7.63□□□□□ -1.19
NEK3-211ENST00000629912 REREQ9P2R6 1566 aa7.63□□□□□ -1.19
NEK3-211ENST00000629912 SCAF11Q99590 1463 aaKnown RBP7.62□□□□□ -1.19
NEK3-211ENST00000629912 PER1O15534 1290 aaPredicted RBP7.62□□□□□ -1.19
NEK3-211ENST00000629912 CCDC184Q52MB2 194 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms