RNA–Protein interactions for RNA: ENST00000629427.2

SHPRH-211, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SHPRH, Length 7,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-211ENST00000629427 SOGA1O94964 1423 aa14.64□□□□□ -0.07
SHPRH-211ENST00000629427 CSPP1Q1MSJ5 1256 aa14.64□□□□□ -0.07
SHPRH-211ENST00000629427 CLUAP1Q96AJ1 413 aa14.64□□□□□ -0.07
SHPRH-211ENST00000629427 TIMELESSQ9UNS1 1208 aa14.64□□□□□ -0.07
SHPRH-211ENST00000629427 LMOD3Q0VAK6 560 aa14.63□□□□□ -0.07
SHPRH-211ENST00000629427 CEP89Q96ST8 783 aa14.63□□□□□ -0.07
SHPRH-211ENST00000629427 FOXD4L1Q9NU39 408 aa14.63□□□□□ -0.07
SHPRH-211ENST00000629427 PDS5BQ9NTI5 1447 aa14.62□□□□□ -0.07
SHPRH-211ENST00000629427 TRAK1Q9UPV9 953 aa14.62□□□□□ -0.07
SHPRH-211ENST00000629427 DEKP35659 375 aaKnown RBP14.61□□□□□ -0.07
SHPRH-211ENST00000629427 C1orf141Q5JVX7 400 aa14.61□□□□□ -0.07
SHPRH-211ENST00000629427 PES1O00541 588 aaKnown RBP14.61□□□□□ -0.07
SHPRH-211ENST00000629427 SF3A1Q15459 793 aaKnown RBP14.61□□□□□ -0.07
SHPRH-211ENST00000629427 KIF16BQ96L93 1317 aa14.61□□□□□ -0.07
SHPRH-211ENST00000629427 FMN1Q68DA7 1419 aa14.59□□□□□ -0.07
SHPRH-211ENST00000629427 FOXD4L5Q5VV16 416 aaPredicted RBP14.59□□□□□ -0.07
SHPRH-211ENST00000629427 NGEFQ8N5V2 710 aa14.59□□□□□ -0.07
SHPRH-211ENST00000629427 FOXD4L4Q8WXT5 416 aaPredicted RBP14.59□□□□□ -0.07
SHPRH-211ENST00000629427 KANK4Q5T7N3 995 aaPredicted RBP14.58□□□□□ -0.07
SHPRH-211ENST00000629427 RILPL2Q969X0 211 aa14.58□□□□□ -0.07
SHPRH-211ENST00000629427 CECR2Q9BXF3 1484 aa14.58□□□□□ -0.08
SHPRH-211ENST00000629427 RAD21O60216 631 aa14.58□□□□□ -0.08
SHPRH-211ENST00000629427 TPD52L1Q16890 204 aaPredicted RBP14.58□□□□□ -0.08
SHPRH-211ENST00000629427 GOLGA6L1Q8N7Z2 621 aa14.58□□□□□ -0.08
SHPRH-211ENST00000629427 CENPJQ9HC77 1338 aaPredicted RBP14.58□□□□□ -0.08
SHPRH-211ENST00000629427 RAB3GAP2Q9H2M9 1393 aa14.58□□□□□ -0.08
SHPRH-211ENST00000629427 MEX3CQ5U5Q3 659 aaKnown RBP14.57□□□□□ -0.08
SHPRH-211ENST00000629427 TDRD9Q8NDG6 1382 aaKnown RBP14.57□□□□□ -0.08
SHPRH-211ENST00000629427 H3BQV1 296 aa14.57□□□□□ -0.08
SHPRH-211ENST00000629427 IFFO2Q5TF58 517 aa14.57□□□□□ -0.08
SHPRH-211ENST00000629427 TRIM34Q9BYJ4 488 aa14.57□□□□□ -0.08
SHPRH-211ENST00000629427 RBM19Q9Y4C8 960 aaKnown RBP14.57□□□□□ -0.08
SHPRH-211ENST00000629427 TCERG1O14776 1098 aaKnown RBP14.56□□□□□ -0.08
SHPRH-211ENST00000629427 ST18O60284 1047 aa14.56□□□□□ -0.08
SHPRH-211ENST00000629427 AKAP17AQ02040 695 aaKnown RBP14.56□□□□□ -0.08
SHPRH-211ENST00000629427 WWC1Q8IX03 1113 aa14.56□□□□□ -0.08
SHPRH-211ENST00000629427 TCEAL9Q9UHQ7 104 aa14.56□□□□□ -0.08
SHPRH-211ENST00000629427 RRP7AQ9Y3A4 280 aaKnown RBP14.56□□□□□ -0.08
SHPRH-211ENST00000629427 KIF3AQ9Y496 699 aa14.56□□□□□ -0.08
SHPRH-211ENST00000629427 PRDM2Q13029 1718 aa14.55□□□□□ -0.08
SHPRH-211ENST00000629427 SMARCA2P51531 1590 aa14.55□□□□□ -0.08
SHPRH-211ENST00000629427 VPS8Q8N3P4 1428 aa14.55□□□□□ -0.08
SHPRH-211ENST00000629427 PHF14O94880 888 aa14.54□□□□□ -0.08
SHPRH-211ENST00000629427 TPM3P06753 285 aa14.54□□□□□ -0.08
SHPRH-211ENST00000629427 SYTL4Q96C24 671 aaPredicted RBP14.54□□□□□ -0.08
SHPRH-211ENST00000629427 NOL10Q9BSC4 688 aaKnown RBP14.54□□□□□ -0.08
SHPRH-211ENST00000629427 CTDP1Q9Y5B0 961 aaPredicted RBP14.54□□□□□ -0.08
SHPRH-211ENST00000629427 FAM184AQ8NB25 1140 aa14.54□□□□□ -0.08
SHPRH-211ENST00000629427 CCDC18Q5T9S5 1454 aa14.53□□□□□ -0.08
SHPRH-211ENST00000629427 COG3Q96JB2 828 aa14.53□□□□□ -0.08
SHPRH-211ENST00000629427 ELL2O00472 640 aaPredicted RBP14.53□□□□□ -0.08
SHPRH-211ENST00000629427 AMOTL1Q8IY63 956 aa14.52□□□□□ -0.08
SHPRH-211ENST00000629427 FBXW7Q969H0 707 aa14.52□□□□□ -0.08
SHPRH-211ENST00000629427 AEBP2Q6ZN18 517 aaPredicted RBP14.52□□□□□ -0.08
SHPRH-211ENST00000629427 TSR1Q2NL82 804 aaKnown RBP14.52□□□□□ -0.09
SHPRH-211ENST00000629427 CCDC88BA6NC98 1476 aa14.52□□□□□ -0.09
SHPRH-211ENST00000629427 GOLGA6L3A6NEY3 463 aa14.52□□□□□ -0.09
SHPRH-211ENST00000629427 TEFQ10587 303 aa14.51□□□□□ -0.09
SHPRH-211ENST00000629427 ANKRD45Q5TZF3 282 aa14.51□□□□□ -0.09
SHPRH-211ENST00000629427 TTC5Q8N0Z6 440 aa14.51□□□□□ -0.09
SHPRH-211ENST00000629427 SYNE3Q6ZMZ3 975 aa14.5□□□□□ -0.09
SHPRH-211ENST00000629427 VPS37DQ86XT2 251 aa14.5□□□□□ -0.09
SHPRH-211ENST00000629427 EIF2S2P20042 333 aaKnown RBP14.5□□□□□ -0.09
SHPRH-211ENST00000629427 FOXD4L6Q3SYB3 417 aaPredicted RBP14.5□□□□□ -0.09
SHPRH-211ENST00000629427 FOXD4L3Q6VB84 417 aaPredicted RBP14.5□□□□□ -0.09
SHPRH-211ENST00000629427 RSPH4AQ5TD94 716 aa14.49□□□□□ -0.09
SHPRH-211ENST00000629427 KRI1Q8N9T8 703 aaKnown RBP14.49□□□□□ -0.09
SHPRH-211ENST00000629427 C9orf78Q9NZ63 289 aaPredicted RBP14.49□□□□□ -0.09
SHPRH-211ENST00000629427 NLRP13Q86W25 1043 aa14.49□□□□□ -0.09
SHPRH-211ENST00000629427 NECTIN2Q92692 538 aa14.49□□□□□ -0.09
SHPRH-211ENST00000629427 L3MBTL2Q969R5 705 aa14.49□□□□□ -0.09
SHPRH-211ENST00000629427 NEXNQ0ZGT2 675 aa14.49□□□□□ -0.09
SHPRH-211ENST00000629427 WIZO95785 1651 aa14.48□□□□□ -0.09
SHPRH-211ENST00000629427 TPM2P07951 284 aa14.48□□□□□ -0.09
SHPRH-211ENST00000629427 PSME1Q06323 249 aa14.48□□□□□ -0.09
SHPRH-211ENST00000629427 BCL2L13Q9BXK5 485 aa14.48□□□□□ -0.09
SHPRH-211ENST00000629427 MCTP1Q6DN14 999 aa14.48□□□□□ -0.09
SHPRH-211ENST00000629427 APPP05067 770 aa14.48□□□□□ -0.09
SHPRH-211ENST00000629427 LRRFIP1Q32MZ4 808 aaKnown RBP14.47□□□□□ -0.09
SHPRH-211ENST00000629427 KLHL34Q8N239 644 aa14.47□□□□□ -0.09
SHPRH-211ENST00000629427 USP35Q9P2H5 1018 aa14.47□□□□□ -0.09
SHPRH-211ENST00000629427 PANK3Q9H999 370 aa14.47□□□□□ -0.09
SHPRH-211ENST00000629427 CNKSR2Q8WXI2 1034 aa14.46□□□□□ -0.09
SHPRH-211ENST00000629427 UACAQ9BZF9 1416 aa14.46□□□□□ -0.09
SHPRH-211ENST00000629427 EVC2Q86UK5 1308 aa14.46□□□□□ -0.09
SHPRH-211ENST00000629427 GOLGA6L19H0YKK7 550 aa14.46□□□□□ -0.09
SHPRH-211ENST00000629427 KIF15Q9NS87 1388 aa14.46□□□□□ -0.09
SHPRH-211ENST00000629427 TNNT3P45378 269 aaPredicted RBP14.46□□□□□ -0.09
SHPRH-211ENST00000629427 CGNL1Q0VF96 1302 aa14.46□□□□□ -0.09
SHPRH-211ENST00000629427 CCDC144AA2RUR9 1427 aa14.46□□□□□ -0.1
SHPRH-211ENST00000629427 CWC22Q9HCG8 908 aaKnown RBP14.45□□□□□ -0.1
SHPRH-211ENST00000629427 CYB5RLQ6IPT4 315 aa14.45□□□□□ -0.1
SHPRH-211ENST00000629427 MINK1Q8N4C8 1332 aaPredicted RBP14.45□□□□□ -0.1
SHPRH-211ENST00000629427 PHF23Q9BUL5 403 aaPredicted RBP14.45□□□□□ -0.1
SHPRH-211ENST00000629427 PHLDB1Q86UU1 1377 aa14.45□□□□□ -0.1
SHPRH-211ENST00000629427 JPH4Q96JJ6 628 aa14.45□□□□□ -0.1
SHPRH-211ENST00000629427 FHOD3Q2V2M9 1422 aa14.44□□□□□ -0.1
SHPRH-211ENST00000629427 DHX16O60231 1041 aaKnown RBP14.44□□□□□ -0.1
SHPRH-211ENST00000629427 TRIM29Q14134 588 aa14.44□□□□□ -0.1
SHPRH-211ENST00000629427 DIAPH3Q9NSV4 1193 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms