RNA–Protein interactions for RNA: ENST00000628915.2

R3HDM1-220, Transcript of R3H domain containing 1, humanhuman

TSL 5 BASIC

Gene R3HDM1, Length 4,325 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-220ENST00000628915 KCNG1Q9UIX4 513 aa5.03□□□□□ -1.6
R3HDM1-220ENST00000628915 MKRN4PQ13434 485 aaPredicted RBP5.02□□□□□ -1.61
R3HDM1-220ENST00000628915 CASC1Q6TDU7 716 aa5.02□□□□□ -1.61
R3HDM1-220ENST00000628915 REM2Q8IYK8 340 aaPredicted RBP5.02□□□□□ -1.61
R3HDM1-220ENST00000628915 VGLL3A8MV65 326 aa5.02□□□□□ -1.61
R3HDM1-220ENST00000628915 TAF3Q5VWG9 929 aa5.02□□□□□ -1.61
R3HDM1-220ENST00000628915 SSR1P43307 286 aaKnown RBP5.02□□□□□ -1.61
R3HDM1-220ENST00000628915 WRNQ14191 1432 aaPredicted RBP eCLIP5.02□□□□□ -1.61
R3HDM1-220ENST00000628915 SPDYE1Q8NFV5 336 aaPredicted RBP5.01□□□□□ -1.61
R3HDM1-220ENST00000628915 ANP32AP39687 249 aaKnown RBP5.01□□□□□ -1.61
R3HDM1-220ENST00000628915 CALD1Q05682 793 aaKnown RBP5.01□□□□□ -1.61
R3HDM1-220ENST00000628915 LMOD2Q6P5Q4 547 aa5.01□□□□□ -1.61
R3HDM1-220ENST00000628915 TMX4Q9H1E5 349 aaPredicted RBP5.01□□□□□ -1.61
R3HDM1-220ENST00000628915 GZF1Q9H116 711 aaPredicted RBP5.01□□□□□ -1.61
R3HDM1-220ENST00000628915 C11orf95C9JLR9 678 aaPredicted RBP5□□□□□ -1.61
R3HDM1-220ENST00000628915 MFAP1P55081 439 aaKnown RBP5□□□□□ -1.61
R3HDM1-220ENST00000628915 CHRDL2Q6WN34 429 aa5□□□□□ -1.61
R3HDM1-220ENST00000628915 FBXW7Q969H0 707 aa5□□□□□ -1.61
R3HDM1-220ENST00000628915 CEP164Q9UPV0 1460 aa5□□□□□ -1.61
R3HDM1-220ENST00000628915 ITGAEP38570 1179 aa5□□□□□ -1.61
R3HDM1-220ENST00000628915 ARMCX6Q7L4S7 300 aa5□□□□□ -1.61
R3HDM1-220ENST00000628915 SSUH2Q9Y2M2 353 aa5□□□□□ -1.61
R3HDM1-220ENST00000628915 RSF1Q96T23 1441 aaPredicted RBP5□□□□□ -1.61
R3HDM1-220ENST00000628915 MAFGO15525 162 aa5□□□□□ -1.61
R3HDM1-220ENST00000628915 GORABQ5T7V8 394 aa5□□□□□ -1.61
R3HDM1-220ENST00000628915 PNNQ9H307 717 aaKnown RBP5□□□□□ -1.61
R3HDM1-220ENST00000628915 EIF4G3O43432 1585 aaKnown RBP4.99□□□□□ -1.61
R3HDM1-220ENST00000628915 RBM26Q5T8P6 1007 aaKnown RBP4.99□□□□□ -1.61
R3HDM1-220ENST00000628915 CHRM1P11229 460 aaPredicted RBP4.99□□□□□ -1.61
R3HDM1-220ENST00000628915 MYH16Q9H6N6 1097 aa4.99□□□□□ -1.61
R3HDM1-220ENST00000628915 KAT6BQ8WYB5 2073 aa4.99□□□□□ -1.61
R3HDM1-220ENST00000628915 TOP2BQ02880 1626 aa4.98□□□□□ -1.61
R3HDM1-220ENST00000628915 POLD1P28340 1107 aa4.98□□□□□ -1.61
R3HDM1-220ENST00000628915 EXOC8Q8IYI6 725 aa4.98□□□□□ -1.61
R3HDM1-220ENST00000628915 SPRYD3Q8NCJ5 442 aa4.98□□□□□ -1.61
R3HDM1-220ENST00000628915 URB2Q14146 1524 aaKnown RBP4.98□□□□□ -1.61
R3HDM1-220ENST00000628915 POTEHQ6S545 545 aa4.98□□□□□ -1.61
R3HDM1-220ENST00000628915 RGS22Q8NE09 1264 aa4.98□□□□□ -1.61
R3HDM1-220ENST00000628915 ZBTB47Q9UFB7 747 aaPredicted RBP4.97□□□□□ -1.61
R3HDM1-220ENST00000628915 CUL7Q14999 1698 aa4.97□□□□□ -1.61
R3HDM1-220ENST00000628915 CALRP27797 417 aaKnown RBP4.97□□□□□ -1.61
R3HDM1-220ENST00000628915 TMTC2Q8N394 836 aa4.97□□□□□ -1.61
R3HDM1-220ENST00000628915 MAGI1Q96QZ7 1491 aaPredicted RBP4.97□□□□□ -1.61
R3HDM1-220ENST00000628915 STAG3Q9UJ98 1225 aa4.97□□□□□ -1.61
R3HDM1-220ENST00000628915 CHD1O14646 1710 aa4.97□□□□□ -1.61
R3HDM1-220ENST00000628915 ERICH3Q5RHP9 1530 aa4.96□□□□□ -1.61
R3HDM1-220ENST00000628915 SMARCA5O60264 1052 aaPredicted RBP4.96□□□□□ -1.62
R3HDM1-220ENST00000628915 SPDYE4A6NLX3 237 aa4.96□□□□□ -1.62
R3HDM1-220ENST00000628915 GOLIM4O00461 696 aa4.96□□□□□ -1.62
R3HDM1-220ENST00000628915 TNNT3P45378 269 aaPredicted RBP4.96□□□□□ -1.62
R3HDM1-220ENST00000628915 PPP4R2Q9NY27 417 aa4.96□□□□□ -1.62
R3HDM1-220ENST00000628915 FOSBP53539 338 aa4.95□□□□□ -1.62
R3HDM1-220ENST00000628915 PPRC1Q5VV67 1664 aaKnown RBP4.95□□□□□ -1.62
R3HDM1-220ENST00000628915 CCER2I3L3R5 266 aa4.95□□□□□ -1.62
R3HDM1-220ENST00000628915 PABPN1Q86U42 306 aaKnown RBP eCLIP4.95□□□□□ -1.62
R3HDM1-220ENST00000628915 P3H3Q8IVL6 736 aa4.95□□□□□ -1.62
R3HDM1-220ENST00000628915 MPNDQ8N594 471 aa4.95□□□□□ -1.62
R3HDM1-220ENST00000628915 IPO9Q96P70 1041 aaKnown RBP4.95□□□□□ -1.62
R3HDM1-220ENST00000628915 ABCA10Q8WWZ4 1543 aa4.95□□□□□ -1.62
R3HDM1-220ENST00000628915 FANCD2Q9BXW9 1451 aa4.95□□□□□ -1.62
R3HDM1-220ENST00000628915 ADAMTS12P58397 1594 aa4.95□□□□□ -1.62
R3HDM1-220ENST00000628915 HSP90AB3PQ58FF7 597 aa4.95□□□□□ -1.62
R3HDM1-220ENST00000628915 FAM43AQ8N2R8 423 aa4.95□□□□□ -1.62
R3HDM1-220ENST00000628915 TOPBP1Q92547 1522 aa4.95□□□□□ -1.62
R3HDM1-220ENST00000628915 WASHC2AQ641Q2 1341 aa4.94□□□□□ -1.62
R3HDM1-220ENST00000628915 TTC36A6NLP5 189 aa4.94□□□□□ -1.62
R3HDM1-220ENST00000628915 BRPF1P55201 1214 aaPredicted RBP4.94□□□□□ -1.62
R3HDM1-220ENST00000628915 SPTY2D1Q68D10 685 aaPredicted RBP4.94□□□□□ -1.62
R3HDM1-220ENST00000628915 ZNF830Q96NB3 372 aaPredicted RBP4.94□□□□□ -1.62
R3HDM1-220ENST00000628915 WDR70Q9NW82 654 aa4.94□□□□□ -1.62
R3HDM1-220ENST00000628915 ZHX1Q9UKY1 873 aaPredicted RBP4.94□□□□□ -1.62
R3HDM1-220ENST00000628915 MRVI1Q9Y6F6 885 aa4.94□□□□□ -1.62
R3HDM1-220ENST00000628915 PITPNM1O00562 1244 aa4.94□□□□□ -1.62
R3HDM1-220ENST00000628915 RALBP1Q15311 655 aa4.94□□□□□ -1.62
R3HDM1-220ENST00000628915 CREBRFQ8IUR6 639 aa4.94□□□□□ -1.62
R3HDM1-220ENST00000628915 CLEC11AQ9Y240 323 aa4.94□□□□□ -1.62
R3HDM1-220ENST00000628915 WASHC2CQ9Y4E1 1318 aa4.94□□□□□ -1.62
R3HDM1-220ENST00000628915 BANK1Q8NDB2 785 aa4.94□□□□□ -1.62
R3HDM1-220ENST00000628915 SIGLEC1Q9BZZ2 1709 aa4.94□□□□□ -1.62
R3HDM1-220ENST00000628915 NRDCO43847 1150 aa4.93□□□□□ -1.62
R3HDM1-220ENST00000628915 C1orf115Q9H7X2 142 aa4.93□□□□□ -1.62
R3HDM1-220ENST00000628915 CDCA8Q53HL2 280 aa4.93□□□□□ -1.62
R3HDM1-220ENST00000628915 PAIP2Q9BPZ3 127 aaKnown RBP4.93□□□□□ -1.62
R3HDM1-220ENST00000628915 RBM27Q9P2N5 1060 aaKnown RBP4.93□□□□□ -1.62
R3HDM1-220ENST00000628915 HMGB1P1B2RPK0 211 aaPredicted RBP4.93□□□□□ -1.62
R3HDM1-220ENST00000628915 WDR78Q5VTH9 848 aa4.93□□□□□ -1.62
R3HDM1-220ENST00000628915 PDCL3Q9H2J4 239 aa4.93□□□□□ -1.62
R3HDM1-220ENST00000628915 LOC102724159A0A0B4J2E5 919 aa4.92□□□□□ -1.62
R3HDM1-220ENST00000628915 TCERG1O14776 1098 aaKnown RBP4.92□□□□□ -1.62
R3HDM1-220ENST00000628915 PWP2Q15269 919 aaKnown RBP4.92□□□□□ -1.62
R3HDM1-220ENST00000628915 KIF13AQ9H1H9 1805 aa4.92□□□□□ -1.62
R3HDM1-220ENST00000628915 LMOD3Q0VAK6 560 aa4.92□□□□□ -1.62
R3HDM1-220ENST00000628915 TERF2IPQ9NYB0 399 aa4.92□□□□□ -1.62
R3HDM1-220ENST00000628915 BRD1O95696 1058 aa4.92□□□□□ -1.62
R3HDM1-220ENST00000628915 ZNF513Q8N8E2 541 aaPredicted RBP4.92□□□□□ -1.62
R3HDM1-220ENST00000628915 CCDC97Q96F63 343 aaPredicted RBP4.92□□□□□ -1.62
R3HDM1-220ENST00000628915 SYNJ1O43426 1573 aa4.92□□□□□ -1.62
R3HDM1-220ENST00000628915 RIMBP3CA6NJZ7 1639 aa4.92□□□□□ -1.62
R3HDM1-220ENST00000628915 RIMBP3BA6NNM3 1639 aa4.92□□□□□ -1.62
R3HDM1-220ENST00000628915 RIMBP3Q9UFD9 1639 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms