RNA–Protein interactions for RNA: ENST00000628733.2

UBE3A-216, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 5

Gene UBE3A, Length 706 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-216ENST00000628733 PDIA6Q15084 440 aa8.18□□□□□ -1.1
UBE3A-216ENST00000628733 RABGEF1Q9UJ41 708 aa8.18□□□□□ -1.1
UBE3A-216ENST00000628733 ARIH1Q9Y4X5 557 aaPredicted RBP8.18□□□□□ -1.1
UBE3A-216ENST00000628733 PRIM1P49642 420 aaKnown RBP8.17□□□□□ -1.1
UBE3A-216ENST00000628733 C6orf132Q5T0Z8 1188 aa8.17□□□□□ -1.1
UBE3A-216ENST00000628733 EPAS1Q99814 870 aa8.17□□□□□ -1.1
UBE3A-216ENST00000628733 PTPN5P54829 565 aa8.16□□□□□ -1.1
UBE3A-216ENST00000628733 RGS20O76081 388 aa8.15□□□□□ -1.1
UBE3A-216ENST00000628733 MRPL50Q8N5N7 158 aaKnown RBP8.15□□□□□ -1.1
UBE3A-216ENST00000628733 DDX12PQ92771 950 aa8.15□□□□□ -1.1
UBE3A-216ENST00000628733 WNT2BQ93097 391 aa8.14□□□□□ -1.11
UBE3A-216ENST00000628733 PAXIP1Q6ZW49 1069 aaPredicted RBP8.13□□□□□ -1.11
UBE3A-216ENST00000628733 NBPF3Q9H094 633 aa8.13□□□□□ -1.11
UBE3A-216ENST00000628733 KIAA1468Q9P260 1216 aa8.13□□□□□ -1.11
UBE3A-216ENST00000628733 ONECUT3O60422 494 aaPredicted RBP8.12□□□□□ -1.11
UBE3A-216ENST00000628733 EN1Q05925 392 aaPredicted RBP8.12□□□□□ -1.11
UBE3A-216ENST00000628733 TSR1Q2NL82 804 aaKnown RBP8.12□□□□□ -1.11
UBE3A-216ENST00000628733 IFFO2Q5TF58 517 aa8.12□□□□□ -1.11
UBE3A-216ENST00000628733 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.12□□□□□ -1.11
UBE3A-216ENST00000628733 E2F4Q16254 413 aa8.11□□□□□ -1.11
UBE3A-216ENST00000628733 RBM33Q96EV2 1170 aaKnown RBP8.11□□□□□ -1.11
UBE3A-216ENST00000628733 SPDYE16A6NNV3 312 aaPredicted RBP8.1□□□□□ -1.11
UBE3A-216ENST00000628733 TRIM6-TRIM34B2RNG4 842 aa8.1□□□□□ -1.11
UBE3A-216ENST00000628733 LAPTM4BQ86VI4 370 aa8.1□□□□□ -1.11
UBE3A-216ENST00000628733 CFAP44Q96MT7 982 aa8.1□□□□□ -1.11
UBE3A-216ENST00000628733 FAM198AQ9UFP1 575 aa8.09□□□□□ -1.11
UBE3A-216ENST00000628733 TSKSQ9UJT2 592 aa8.09□□□□□ -1.11
UBE3A-216ENST00000628733 C3orf80F5H4A9 247 aa8.08□□□□□ -1.12
UBE3A-216ENST00000628733 BCAMP50895 628 aa8.08□□□□□ -1.12
UBE3A-216ENST00000628733 NBR1Q14596 966 aa8.08□□□□□ -1.12
UBE3A-216ENST00000628733 ZFRQ96KR1 1074 aaKnown RBP8.08□□□□□ -1.12
UBE3A-216ENST00000628733 SOWAHBA6NEL2 793 aa8.07□□□□□ -1.12
UBE3A-216ENST00000628733 SEPT9Q9UHD8 586 aaPredicted RBP8.07□□□□□ -1.12
UBE3A-216ENST00000628733 GOLGA8CPA6NN73 597 aa8.06□□□□□ -1.12
UBE3A-216ENST00000628733 OSBPP22059 807 aa8.06□□□□□ -1.12
UBE3A-216ENST00000628733 A0A0G2JS52 829 aa8.05□□□□□ -1.12
UBE3A-216ENST00000628733 ANKK1Q8NFD2 765 aa8.05□□□□□ -1.12
UBE3A-216ENST00000628733 MAP3K7O43318 606 aa8.04□□□□□ -1.12
UBE3A-216ENST00000628733 ITGBL1O95965 494 aaPredicted RBP8.04□□□□□ -1.12
UBE3A-216ENST00000628733 FAM98CQ17RN3 349 aaKnown RBP8.04□□□□□ -1.12
UBE3A-216ENST00000628733 CDHR5Q9HBB8 845 aa8.03□□□□□ -1.12
UBE3A-216ENST00000628733 TSHZ2Q9NRE2 1034 aa8.03□□□□□ -1.12
UBE3A-216ENST00000628733 WBP1LQ9NX94 342 aa8.03□□□□□ -1.12
UBE3A-216ENST00000628733 PRSS12P56730 875 aa8.01□□□□□ -1.13
UBE3A-216ENST00000628733 Q6ZNB5 142 aa8.01□□□□□ -1.13
UBE3A-216ENST00000628733 NPDC1Q9NQX5 325 aaPredicted RBP8.01□□□□□ -1.13
UBE3A-216ENST00000628733 GRXCR2A6NFK2 248 aa8□□□□□ -1.13
UBE3A-216ENST00000628733 TTC13Q8NBP0 860 aa8□□□□□ -1.13
UBE3A-216ENST00000628733 CDCA7LQ96GN5 454 aa8□□□□□ -1.13
UBE3A-216ENST00000628733 WDR70Q9NW82 654 aa7.99□□□□□ -1.13
UBE3A-216ENST00000628733 PACS2Q86VP3 889 aa7.98□□□□□ -1.13
UBE3A-216ENST00000628733 SMAPO00193 183 aa7.97□□□□□ -1.13
UBE3A-216ENST00000628733 NYAP1Q6ZVC0 841 aa7.97□□□□□ -1.13
UBE3A-216ENST00000628733 KCNV2Q8TDN2 545 aa7.97□□□□□ -1.13
UBE3A-216ENST00000628733 CERKQ8TCT0 537 aa7.96□□□□□ -1.14
UBE3A-216ENST00000628733 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.96□□□□□ -1.14
UBE3A-216ENST00000628733 RBM27Q9P2N5 1060 aaKnown RBP7.96□□□□□ -1.14
UBE3A-216ENST00000628733 TSR3Q9UJK0 312 aaKnown RBP7.96□□□□□ -1.14
UBE3A-216ENST00000628733 MLLT3P42568 568 aaPredicted RBP7.95□□□□□ -1.14
UBE3A-216ENST00000628733 TATDN2Q93075 761 aa7.95□□□□□ -1.14
UBE3A-216ENST00000628733 HPS5Q9UPZ3 1129 aa7.95□□□□□ -1.14
UBE3A-216ENST00000628733 ARHGEF1Q92888 912 aaKnown RBP7.94□□□□□ -1.14
UBE3A-216ENST00000628733 LRCH3Q96II8 777 aa7.94□□□□□ -1.14
UBE3A-216ENST00000628733 SAMD7Q7Z3H4 446 aa7.93□□□□□ -1.14
UBE3A-216ENST00000628733 PADI6Q6TGC4 694 aa7.91□□□□□ -1.14
UBE3A-216ENST00000628733 NBPF26B4DH59 902 aa7.9□□□□□ -1.14
UBE3A-216ENST00000628733 TJAP1Q5JTD0 557 aa7.9□□□□□ -1.14
UBE3A-216ENST00000628733 NUDT18Q6ZVK8 323 aa7.9□□□□□ -1.14
UBE3A-216ENST00000628733 PNMA3Q9UL41 463 aa7.9□□□□□ -1.14
UBE3A-216ENST00000628733 EYA1Q99502 592 aa7.89□□□□□ -1.15
UBE3A-216ENST00000628733 KCNC4Q03721 635 aa7.88□□□□□ -1.15
UBE3A-216ENST00000628733 APLP1P51693 650 aa7.86□□□□□ -1.15
UBE3A-216ENST00000628733 PPP4CP60510 307 aa7.86□□□□□ -1.15
UBE3A-216ENST00000628733 PTGDRQ13258 359 aa7.86□□□□□ -1.15
UBE3A-216ENST00000628733 LAPTM4AQ15012 233 aa7.85□□□□□ -1.15
UBE3A-216ENST00000628733 MTRQ99707 1265 aa7.84□□□□□ -1.15
UBE3A-216ENST00000628733 SWT1Q5T5J6 900 aaKnown RBP7.83□□□□□ -1.16
UBE3A-216ENST00000628733 ZNF516Q92618 1163 aa7.82□□□□□ -1.16
UBE3A-216ENST00000628733 SEMA3EO15041 775 aa7.81□□□□□ -1.16
UBE3A-216ENST00000628733 GFRA3O60609 400 aa7.81□□□□□ -1.16
UBE3A-216ENST00000628733 TRAF7Q6Q0C0 670 aa7.81□□□□□ -1.16
UBE3A-216ENST00000628733 ADGRG1Q9Y653 693 aa7.81□□□□□ -1.16
UBE3A-216ENST00000628733 IL21Q9HBE4 155 aa7.79□□□□□ -1.16
UBE3A-216ENST00000628733 LCE2BO14633 110 aa7.78□□□□□ -1.16
UBE3A-216ENST00000628733 FAM161AQ3B820 660 aa7.78□□□□□ -1.16
UBE3A-216ENST00000628733 NKX2-3Q8TAU0 364 aa7.78□□□□□ -1.16
UBE3A-216ENST00000628733 PLCB2Q00722 1185 aa7.77□□□□□ -1.17
UBE3A-216ENST00000628733 TESPA1A2RU30 521 aaPredicted RBP7.76□□□□□ -1.17
UBE3A-216ENST00000628733 GPR37O15354 613 aa7.76□□□□□ -1.17
UBE3A-216ENST00000628733 PPP1R18Q6NYC8 613 aa7.76□□□□□ -1.17
UBE3A-216ENST00000628733 P3H3Q8IVL6 736 aa7.76□□□□□ -1.17
UBE3A-216ENST00000628733 TMEM134Q9H6X4 195 aa7.76□□□□□ -1.17
UBE3A-216ENST00000628733 RNF40O75150 1001 aa7.75□□□□□ -1.17
UBE3A-216ENST00000628733 SLF2Q8IX21 1173 aa7.75□□□□□ -1.17
UBE3A-216ENST00000628733 NUTM2FA1L443 756 aa7.73□□□□□ -1.17
UBE3A-216ENST00000628733 RCCD1A6NED2 376 aa7.73□□□□□ -1.17
UBE3A-216ENST00000628733 DNAJB2P25686 324 aa7.73□□□□□ -1.17
UBE3A-216ENST00000628733 HDGFP51858 240 aaKnown RBP7.73□□□□□ -1.17
UBE3A-216ENST00000628733 SLC10A3P09131 477 aa7.72□□□□□ -1.17
UBE3A-216ENST00000628733 COPS2P61201 443 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms