RNA–Protein interactions for RNA: ENST00000626847.2

SMN2-214, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMN2, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-214ENST00000626847 CCDC88BA6NC98 1476 aa12.2□□□□□ -0.46
SMN2-214ENST00000626847 E2F4Q16254 413 aa12.2□□□□□ -0.46
SMN2-214ENST00000626847 LMOD2Q6P5Q4 547 aa12.2□□□□□ -0.46
SMN2-214ENST00000626847 PPARGC1BQ86YN6 1023 aaKnown RBP12.2□□□□□ -0.46
SMN2-214ENST00000626847 CEP170Q5SW79 1584 aa12.19□□□□□ -0.46
SMN2-214ENST00000626847 ARHGEF1Q92888 912 aaKnown RBP12.19□□□□□ -0.46
SMN2-214ENST00000626847 DIP2BQ9P265 1576 aa12.18□□□□□ -0.46
SMN2-214ENST00000626847 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.17□□□□□ -0.46
SMN2-214ENST00000626847 TMEM106CQ9BVX2 250 aa12.16□□□□□ -0.46
SMN2-214ENST00000626847 TIMELESSQ9UNS1 1208 aa12.15□□□□□ -0.46
SMN2-214ENST00000626847 FGD5Q6ZNL6 1462 aa12.15□□□□□ -0.46
SMN2-214ENST00000626847 PDE4AP27815 886 aa12.14□□□□□ -0.47
SMN2-214ENST00000626847 MAPKBP1O60336 1514 aa12.13□□□□□ -0.47
SMN2-214ENST00000626847 MKRN3Q13064 507 aaKnown RBP12.13□□□□□ -0.47
SMN2-214ENST00000626847 LARP6Q9BRS8 491 aaKnown RBP12.13□□□□□ -0.47
SMN2-214ENST00000626847 CLSPNQ9HAW4 1339 aa12.13□□□□□ -0.47
SMN2-214ENST00000626847 PDIA4P13667 645 aaKnown RBP12.12□□□□□ -0.47
SMN2-214ENST00000626847 SHROOM2Q13796 1616 aa12.11□□□□□ -0.47
SMN2-214ENST00000626847 PBRM1Q86U86 1689 aa12.11□□□□□ -0.47
SMN2-214ENST00000626847 TMEM121BQ9BXQ6 578 aaPredicted RBP12.11□□□□□ -0.47
SMN2-214ENST00000626847 ANO8Q9HCE9 1232 aaPredicted RBP12.11□□□□□ -0.47
SMN2-214ENST00000626847 NUP160Q12769 1436 aa12.1□□□□□ -0.47
SMN2-214ENST00000626847 TSPOAP1O95153 1857 aa12.1□□□□□ -0.47
SMN2-214ENST00000626847 MS4A4AQ96JQ5 239 aa12.1□□□□□ -0.47
SMN2-214ENST00000626847 GRIN2AQ12879 1464 aa12.09□□□□□ -0.47
SMN2-214ENST00000626847 NCKAP5LQ9HCH0 1330 aa12.08□□□□□ -0.48
SMN2-214ENST00000626847 NEUROD1Q13562 356 aa12.08□□□□□ -0.48
SMN2-214ENST00000626847 MS4A3Q96HJ5 214 aa12.08□□□□□ -0.48
SMN2-214ENST00000626847 DDX27Q96GQ7 796 aaKnown RBP12.06□□□□□ -0.48
SMN2-214ENST00000626847 SEMA3EO15041 775 aa12.05□□□□□ -0.48
SMN2-214ENST00000626847 TRPC6Q9Y210 931 aa12.05□□□□□ -0.48
SMN2-214ENST00000626847 PDE4CQ08493 712 aa12.04□□□□□ -0.48
SMN2-214ENST00000626847 PRG4Q92954 1404 aaPredicted RBP12.04□□□□□ -0.48
SMN2-214ENST00000626847 SMYD5Q6GMV2 418 aa12.03□□□□□ -0.48
SMN2-214ENST00000626847 CRISPLD2Q9H0B8 497 aa12.03□□□□□ -0.48
SMN2-214ENST00000626847 TESPA1A2RU30 521 aaPredicted RBP12.02□□□□□ -0.49
SMN2-214ENST00000626847 MFSD10Q14728 455 aa12.02□□□□□ -0.49
SMN2-214ENST00000626847 CUX1P39880 1505 aa12.01□□□□□ -0.49
SMN2-214ENST00000626847 ABCA5Q8WWZ7 1642 aa12□□□□□ -0.49
SMN2-214ENST00000626847 ADCY10Q96PN6 1610 aa12□□□□□ -0.49
SMN2-214ENST00000626847 TIE1P35590 1138 aa12□□□□□ -0.49
SMN2-214ENST00000626847 TMEM132AQ24JP5 1023 aa11.99□□□□□ -0.49
SMN2-214ENST00000626847 ZC3H15Q8WU90 426 aaKnown RBP11.99□□□□□ -0.49
SMN2-214ENST00000626847 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.99□□□□□ -0.49
SMN2-214ENST00000626847 GLIPR1L2Q4G1C9 344 aa11.98□□□□□ -0.49
SMN2-214ENST00000626847 SLAIN1Q8ND83 568 aa11.98□□□□□ -0.49
SMN2-214ENST00000626847 COL17A1Q9UMD9 1497 aaPredicted RBP11.98□□□□□ -0.49
SMN2-214ENST00000626847 ADAMTS12P58397 1594 aa11.98□□□□□ -0.49
SMN2-214ENST00000626847 TTLL13PA6NNM8 815 aa11.97□□□□□ -0.49
SMN2-214ENST00000626847 TAF7LQ5H9L4 462 aa11.97□□□□□ -0.49
SMN2-214ENST00000626847 JPH4Q96JJ6 628 aa11.97□□□□□ -0.49
SMN2-214ENST00000626847 ABCA10Q8WWZ4 1543 aa11.97□□□□□ -0.49
SMN2-214ENST00000626847 PPRC1Q5VV67 1664 aaKnown RBP11.96□□□□□ -0.49
SMN2-214ENST00000626847 POTEFA5A3E0 1075 aa11.95□□□□□ -0.5
SMN2-214ENST00000626847 ATN1P54259 1190 aaPredicted RBP11.94□□□□□ -0.5
SMN2-214ENST00000626847 TOP2BQ02880 1626 aa11.93□□□□□ -0.5
SMN2-214ENST00000626847 ARIH1Q9Y4X5 557 aaPredicted RBP11.93□□□□□ -0.5
SMN2-214ENST00000626847 FHAD1B1AJZ9 1412 aa11.92□□□□□ -0.5
SMN2-214ENST00000626847 CAMK2BQ13554 666 aa11.92□□□□□ -0.5
SMN2-214ENST00000626847 BMP2KQ9NSY1 1161 aaPredicted RBP11.92□□□□□ -0.5
SMN2-214ENST00000626847 TRIM35Q9UPQ4 493 aa11.92□□□□□ -0.5
SMN2-214ENST00000626847 PPP1R15BQ5SWA1 713 aa11.91□□□□□ -0.5
SMN2-214ENST00000626847 MARVELD3Q96A59 401 aa11.89□□□□□ -0.51
SMN2-214ENST00000626847 SLC24A3Q9HC58 644 aa11.89□□□□□ -0.51
SMN2-214ENST00000626847 GPHNQ9NQX3 736 aaPredicted RBP11.89□□□□□ -0.51
SMN2-214ENST00000626847 GLI2P10070 1586 aa11.89□□□□□ -0.51
SMN2-214ENST00000626847 ZNF326Q5BKZ1 582 aaKnown RBP11.88□□□□□ -0.51
SMN2-214ENST00000626847 PCGF6Q9BYE7 350 aa11.88□□□□□ -0.51
SMN2-214ENST00000626847 FGD1P98174 961 aa11.87□□□□□ -0.51
SMN2-214ENST00000626847 BRPF1P55201 1214 aaPredicted RBP11.86□□□□□ -0.51
SMN2-214ENST00000626847 NEUROD2Q15784 382 aa11.86□□□□□ -0.51
SMN2-214ENST00000626847 SEC24BO95487 1268 aa11.86□□□□□ -0.51
SMN2-214ENST00000626847 NPM2Q86SE8 214 aaKnown RBP11.86□□□□□ -0.51
SMN2-214ENST00000626847 SPATA31D1Q6ZQQ2 1576 aa11.85□□□□□ -0.51
SMN2-214ENST00000626847 CERKQ8TCT0 537 aa11.85□□□□□ -0.51
SMN2-214ENST00000626847 TMC2Q8TDI7 906 aa11.85□□□□□ -0.51
SMN2-214ENST00000626847 KRTAP3-3Q9BYR6 98 aa11.85□□□□□ -0.51
SMN2-214ENST00000626847 KRTAP3-2Q9BYR7 98 aa11.85□□□□□ -0.51
SMN2-214ENST00000626847 DPY19L2Q6NUT2 758 aa11.84□□□□□ -0.51
SMN2-214ENST00000626847 ASXL2Q76L83 1435 aa11.83□□□□□ -0.52
SMN2-214ENST00000626847 G3V3G9 751 aa11.83□□□□□ -0.52
SMN2-214ENST00000626847 ZMYND10O75800 440 aa11.83□□□□□ -0.52
SMN2-214ENST00000626847 RUSC2Q8N2Y8 1516 aa11.83□□□□□ -0.52
SMN2-214ENST00000626847 SNPHO15079 494 aa11.82□□□□□ -0.52
SMN2-214ENST00000626847 MICALL2Q8IY33 904 aa11.82□□□□□ -0.52
SMN2-214ENST00000626847 PLB1Q6P1J6 1458 aa11.82□□□□□ -0.52
SMN2-214ENST00000626847 CDK11AQ9UQ88 783 aaPredicted RBP11.81□□□□□ -0.52
SMN2-214ENST00000626847 DPYSL4O14531 572 aa11.8□□□□□ -0.52
SMN2-214ENST00000626847 MLLT3P42568 568 aaPredicted RBP11.8□□□□□ -0.52
SMN2-214ENST00000626847 DSG2Q14126 1118 aa11.8□□□□□ -0.52
SMN2-214ENST00000626847 GPIHBP1Q8IV16 184 aa11.8□□□□□ -0.52
SMN2-214ENST00000626847 RNF166Q96A37 237 aaPredicted RBP11.8□□□□□ -0.52
SMN2-214ENST00000626847 TEX14Q8IWB6 1497 aa11.79□□□□□ -0.52
SMN2-214ENST00000626847 SALL2Q9Y467 1007 aaPredicted RBP11.79□□□□□ -0.52
SMN2-214ENST00000626847 PCF11O94913 1555 aaKnown RBP11.79□□□□□ -0.52
SMN2-214ENST00000626847 ABCC2Q92887 1545 aa11.79□□□□□ -0.52
SMN2-214ENST00000626847 PTPRMP28827 1452 aa11.79□□□□□ -0.52
SMN2-214ENST00000626847 RBM26Q5T8P6 1007 aaKnown RBP11.78□□□□□ -0.52
SMN2-214ENST00000626847 ERICH3Q5RHP9 1530 aa11.78□□□□□ -0.52
SMN2-214ENST00000626847 MAP3K4Q9Y6R4 1608 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 116.2 ms