RNA–Protein interactions for RNA: ENST00000625293.1

TREX1-205, Transcript of three prime repair exonuclease 1, humanhuman

BASIC

Gene TREX1, Length 1,783 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-205ENST00000625293 RTEL1-TNFRSF6BF6WH68 1400 aa27.97■■■□□ 2.07
TREX1-205ENST00000625293 MAGI2Q86UL8 1455 aa27.95■■■□□ 2.06
TREX1-205ENST00000625293 ZFYVE16Q7Z3T8 1539 aa27.94■■■□□ 2.06
TREX1-205ENST00000625293 MYT1LQ9UL68 1186 aa27.93■■■□□ 2.06
TREX1-205ENST00000625293 ZNF518AQ6AHZ1 1483 aa27.91■■■□□ 2.06
TREX1-205ENST00000625293 IQGAP3Q86VI3 1631 aa27.9■■■□□ 2.06
TREX1-205ENST00000625293 ZMYM4Q5VZL5 1548 aa27.9■■■□□ 2.06
TREX1-205ENST00000625293 HIRIP3Q9BW71 556 aaPredicted RBP27.89■■■□□ 2.06
TREX1-205ENST00000625293 SPAG9O60271 1321 aaKnown RBP27.88■■■□□ 2.05
TREX1-205ENST00000625293 NBPF8Q3BBV2 869 aa27.88■■■□□ 2.05
TREX1-205ENST00000625293 INO80Q9ULG1 1556 aaPredicted RBP27.87■■■□□ 2.05
TREX1-205ENST00000625293 KDM5CP41229 1560 aa27.85■■■□□ 2.05
TREX1-205ENST00000625293 ARID4BQ4LE39 1312 aaPredicted RBP27.85■■■□□ 2.05
TREX1-205ENST00000625293 ARHGEF40Q8TER5 1519 aa27.84■■■□□ 2.05
TREX1-205ENST00000625293 ATP7AQ04656 1500 aa27.82■■■□□ 2.04
TREX1-205ENST00000625293 DDX10Q13206 875 aaKnown RBP27.81■■■□□ 2.04
TREX1-205ENST00000625293 SIGLEC1Q9BZZ2 1709 aa27.81■■■□□ 2.04
TREX1-205ENST00000625293 HSPA5P11021 654 aaKnown RBP27.81■■■□□ 2.04
TREX1-205ENST00000625293 PLA2R1Q13018 1463 aa27.79■■■□□ 2.04
TREX1-205ENST00000625293 MLH3Q9UHC1 1453 aa27.79■■■□□ 2.04
TREX1-205ENST00000625293 AEBP2Q6ZN18 517 aaPredicted RBP27.78■■■□□ 2.04
TREX1-205ENST00000625293 UHRF1BP1Q6BDS2 1440 aa27.78■■■□□ 2.04
TREX1-205ENST00000625293 EIF4G2P78344 907 aaKnown RBP eCLIP27.78■■■□□ 2.04
TREX1-205ENST00000625293 HECW2Q9P2P5 1572 aa27.77■■■□□ 2.04
TREX1-205ENST00000625293 ATP10AO60312 1499 aa27.77■■■□□ 2.04
TREX1-205ENST00000625293 MLECQ14165 292 aa27.76■■■□□ 2.03
TREX1-205ENST00000625293 CENPBP07199 599 aaPredicted RBP27.76■■■□□ 2.03
TREX1-205ENST00000625293 KIDINS220Q9ULH0 1771 aa27.75■■■□□ 2.03
TREX1-205ENST00000625293 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.75■■■□□ 2.03
TREX1-205ENST00000625293 DEPDC5O75140 1603 aa27.75■■■□□ 2.03
TREX1-205ENST00000625293 SPATA31E1Q6ZUB1 1445 aa27.74■■■□□ 2.03
TREX1-205ENST00000625293 ABCA6Q8N139 1617 aa27.73■■■□□ 2.03
TREX1-205ENST00000625293 DIP2CQ9Y2E4 1556 aa27.73■■■□□ 2.03
TREX1-205ENST00000625293 CCDC144AA2RUR9 1427 aa27.7■■■□□ 2.02
TREX1-205ENST00000625293 EIF2AK4Q9P2K8 1649 aaKnown RBP27.68■■■□□ 2.02
TREX1-205ENST00000625293 DHX29Q7Z478 1369 aaKnown RBP27.68■■■□□ 2.02
TREX1-205ENST00000625293 VWDEQ8N2E2 1590 aa27.67■■■□□ 2.02
TREX1-205ENST00000625293 WASHC2AQ641Q2 1341 aa27.67■■■□□ 2.02
TREX1-205ENST00000625293 RALGAPBQ86X10 1494 aa27.67■■■□□ 2.02
TREX1-205ENST00000625293 YTHDC1Q96MU7 727 aaKnown RBP27.65■■■□□ 2.02
TREX1-205ENST00000625293 BCORL1Q5H9F3 1711 aa27.63■■■□□ 2.01
TREX1-205ENST00000625293 PRDM15P57071 1507 aaPredicted RBP27.61■■■□□ 2.01
TREX1-205ENST00000625293 MROH1Q8NDA8 1641 aa27.61■■■□□ 2.01
TREX1-205ENST00000625293 E9PCH4 1651 aa27.6■■■□□ 2.01
TREX1-205ENST00000625293 ADAMTSL3P82987 1691 aa27.6■■■□□ 2.01
TREX1-205ENST00000625293 TET3O43151 1660 aa27.58■■■□□ 2.01
TREX1-205ENST00000625293 PLPPR3Q6T4P5 718 aa27.58■■■□□ 2
TREX1-205ENST00000625293 C11orf95C9JLR9 678 aaPredicted RBP27.57■■■□□ 2
TREX1-205ENST00000625293 CCDC7Q96M83 1385 aa27.57■■■□□ 2
TREX1-205ENST00000625293 MADDQ8WXG6 1647 aa27.57■■■□□ 2
TREX1-205ENST00000625293 PTPRTO14522 1441 aa27.57■■■□□ 2
TREX1-205ENST00000625293 A2MP01023 1474 aa27.56■■■□□ 2
TREX1-205ENST00000625293 DCAF11Q8TEB1 546 aa27.55■■■□□ 2
TREX1-205ENST00000625293 USP47Q96K76 1375 aa27.55■■■□□ 2
TREX1-205ENST00000625293 TRPM2O94759 1503 aa27.55■■■□□ 2
TREX1-205ENST00000625293 ZNF326Q5BKZ1 582 aaKnown RBP27.55■■■□□ 2
TREX1-205ENST00000625293 REREQ9P2R6 1566 aa27.55■■■□□ 2
TREX1-205ENST00000625293 KANK1Q14678 1352 aa27.54■■■□□ 2
TREX1-205ENST00000625293 PRAG1Q86YV5 1406 aa27.53■■■□□ 2
TREX1-205ENST00000625293 KIF3BO15066 747 aa27.53■■■□□ 2
TREX1-205ENST00000625293 SCAF1Q9H7N4 1312 aaKnown RBP27.52■■■□□ 2
TREX1-205ENST00000625293 POLR1AO95602 1720 aaPredicted RBP27.52■■■□□ 2
TREX1-205ENST00000625293 RNF17Q9BXT8 1623 aaKnown RBP27.51■■□□□ 1.99
TREX1-205ENST00000625293 ANP32CO43423 234 aa27.5■■□□□ 1.99
TREX1-205ENST00000625293 PTPRMP28827 1452 aa27.5■■□□□ 1.99
TREX1-205ENST00000625293 AGLP35573 1532 aa27.5■■□□□ 1.99
TREX1-205ENST00000625293 GGT6Q6P531 493 aa27.5■■□□□ 1.99
TREX1-205ENST00000625293 KDM2AQ9Y2K7 1162 aa27.5■■□□□ 1.99
TREX1-205ENST00000625293 CNTLNQ9NXG0 1405 aa27.49■■□□□ 1.99
TREX1-205ENST00000625293 CCER2I3L3R5 266 aa27.49■■□□□ 1.99
TREX1-205ENST00000625293 LMTK2Q8IWU2 1503 aa27.49■■□□□ 1.99
TREX1-205ENST00000625293 SPHKAPQ2M3C7 1700 aa27.49■■□□□ 1.99
TREX1-205ENST00000625293 TRPM1Q7Z4N2 1603 aa27.48■■□□□ 1.99
TREX1-205ENST00000625293 RIMS1Q86UR5 1692 aaKnown RBP27.48■■□□□ 1.99
TREX1-205ENST00000625293 KIF7Q2M1P5 1343 aa27.47■■□□□ 1.99
TREX1-205ENST00000625293 CEBPAP49715 358 aaPredicted RBP27.47■■□□□ 1.99
TREX1-205ENST00000625293 CARD11Q9BXL7 1154 aa27.44■■□□□ 1.98
TREX1-205ENST00000625293 EFCAB6Q5THR3 1501 aa27.44■■□□□ 1.98
TREX1-205ENST00000625293 RGL3Q3MIN7 710 aa27.43■■□□□ 1.98
TREX1-205ENST00000625293 GPRASP1Q5JY77 1395 aa27.43■■□□□ 1.98
TREX1-205ENST00000625293 CLTCL1P53675 1640 aa27.42■■□□□ 1.98
TREX1-205ENST00000625293 FER1L4A9Z1Z3 1794 aa27.42■■□□□ 1.98
TREX1-205ENST00000625293 CEP152O94986 1710 aa27.41■■□□□ 1.98
TREX1-205ENST00000625293 NEURL4Q96JN8 1562 aa27.4■■□□□ 1.98
TREX1-205ENST00000625293 ROCK2O75116 1388 aaKnown RBP27.4■■□□□ 1.98
TREX1-205ENST00000625293 LAMC1P11047 1609 aa27.39■■□□□ 1.98
TREX1-205ENST00000625293 ESF1Q9H501 851 aaKnown RBP27.37■■□□□ 1.97
TREX1-205ENST00000625293 NBPF1Q3BBV0 1214 aa27.3■■□□□ 1.96
TREX1-205ENST00000625293 ST20-MTHFSA0A0A6YYL1 179 aa27.3■■□□□ 1.96
TREX1-205ENST00000625293 STAC3Q96MF2 364 aa27.3■■□□□ 1.96
TREX1-205ENST00000625293 ABCC3O15438 1527 aa27.28■■□□□ 1.96
TREX1-205ENST00000625293 ZMYM3Q14202 1370 aa27.28■■□□□ 1.96
TREX1-205ENST00000625293 CLTCQ00610 1675 aaKnown RBP27.26■■□□□ 1.95
TREX1-205ENST00000625293 UGGT1Q9NYU2 1555 aa27.26■■□□□ 1.95
TREX1-205ENST00000625293 GTF3C3Q9Y5Q9 886 aa27.26■■□□□ 1.95
TREX1-205ENST00000625293 NPATQ14207 1427 aa27.26■■□□□ 1.95
TREX1-205ENST00000625293 WASHC2CQ9Y4E1 1318 aa27.25■■□□□ 1.95
TREX1-205ENST00000625293 C3P01024 1663 aa27.23■■□□□ 1.95
TREX1-205ENST00000625293 PPP6R1Q9UPN7 881 aa27.22■■□□□ 1.95
TREX1-205ENST00000625293 PRKRIP1Q9H875 184 aaPredicted RBP27.22■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms