RNA–Protein interactions for RNA: ENST00000625243.1

CHD2-203, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 1 (best)

Gene CHD2, Length 361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-203ENST00000625243 LAPTM4BQ86VI4 370 aa8.76□□□□□ -1.01
CHD2-203ENST00000625243 KCNC4Q03721 635 aa8.75□□□□□ -1.01
CHD2-203ENST00000625243 NYAP1Q6ZVC0 841 aa8.75□□□□□ -1.01
CHD2-203ENST00000625243 KIAA1468Q9P260 1216 aa8.75□□□□□ -1.01
CHD2-203ENST00000625243 ZFRQ96KR1 1074 aaKnown RBP8.74□□□□□ -1.01
CHD2-203ENST00000625243 WBP1LQ9NX94 342 aa8.74□□□□□ -1.01
CHD2-203ENST00000625243 TYW1BQ6NUM6 668 aa8.73□□□□□ -1.01
CHD2-203ENST00000625243 FBXW7Q969H0 707 aa8.73□□□□□ -1.01
CHD2-203ENST00000625243 EMILIN3Q9NT22 766 aa8.72□□□□□ -1.01
CHD2-203ENST00000625243 SEPT9Q9UHD8 586 aaPredicted RBP8.71□□□□□ -1.02
CHD2-203ENST00000625243 PHF14O94880 888 aa8.7□□□□□ -1.02
CHD2-203ENST00000625243 MFSD10Q14728 455 aa8.7□□□□□ -1.02
CHD2-203ENST00000625243 ONECUT3O60422 494 aaPredicted RBP8.69□□□□□ -1.02
CHD2-203ENST00000625243 LAPTM4AQ15012 233 aa8.69□□□□□ -1.02
CHD2-203ENST00000625243 GTPBP6O43824 516 aaPredicted RBP8.67□□□□□ -1.02
CHD2-203ENST00000625243 C6orf132Q5T0Z8 1188 aa8.67□□□□□ -1.02
CHD2-203ENST00000625243 TSR3Q9UJK0 312 aaKnown RBP8.67□□□□□ -1.02
CHD2-203ENST00000625243 GFRA3O60609 400 aa8.66□□□□□ -1.02
CHD2-203ENST00000625243 FAM98CQ17RN3 349 aaKnown RBP8.66□□□□□ -1.02
CHD2-203ENST00000625243 LRCH3Q96II8 777 aa8.66□□□□□ -1.02
CHD2-203ENST00000625243 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.66□□□□□ -1.02
CHD2-203ENST00000625243 HPS5Q9UPZ3 1129 aa8.66□□□□□ -1.02
CHD2-203ENST00000625243 TRIM6-TRIM34B2RNG4 842 aa8.65□□□□□ -1.02
CHD2-203ENST00000625243 TRAF7Q6Q0C0 670 aa8.65□□□□□ -1.02
CHD2-203ENST00000625243 LCE2BO14633 110 aa8.64□□□□□ -1.03
CHD2-203ENST00000625243 EPAS1Q99814 870 aa8.64□□□□□ -1.03
CHD2-203ENST00000625243 RBM33Q96EV2 1170 aaKnown RBP8.62□□□□□ -1.03
CHD2-203ENST00000625243 PPP4CP60510 307 aa8.59□□□□□ -1.03
CHD2-203ENST00000625243 PRKD2Q9BZL6 878 aa8.59□□□□□ -1.03
CHD2-203ENST00000625243 DPYSL4O14531 572 aa8.58□□□□□ -1.04
CHD2-203ENST00000625243 CADPS2Q86UW7 1296 aa8.57□□□□□ -1.04
CHD2-203ENST00000625243 PACS2Q86VP3 889 aa8.57□□□□□ -1.04
CHD2-203ENST00000625243 NRG2O14511 850 aaPredicted RBP8.56□□□□□ -1.04
CHD2-203ENST00000625243 TJAP1Q5JTD0 557 aa8.56□□□□□ -1.04
CHD2-203ENST00000625243 DDX12PQ92771 950 aa8.56□□□□□ -1.04
CHD2-203ENST00000625243 CAMK2BQ13554 666 aa8.54□□□□□ -1.04
CHD2-203ENST00000625243 TSKSQ9UJT2 592 aa8.54□□□□□ -1.04
CHD2-203ENST00000625243 TSR1Q2NL82 804 aaKnown RBP8.52□□□□□ -1.05
CHD2-203ENST00000625243 PPP1R18Q6NYC8 613 aa8.52□□□□□ -1.05
CHD2-203ENST00000625243 SAMD7Q7Z3H4 446 aa8.52□□□□□ -1.05
CHD2-203ENST00000625243 MTRQ99707 1265 aa8.52□□□□□ -1.05
CHD2-203ENST00000625243 IL21Q9HBE4 155 aa8.52□□□□□ -1.05
CHD2-203ENST00000625243 V9GY48 417 aaPredicted RBP8.52□□□□□ -1.05
CHD2-203ENST00000625243 SMAPO00193 183 aa8.51□□□□□ -1.05
CHD2-203ENST00000625243 MAP3K7O43318 606 aa8.51□□□□□ -1.05
CHD2-203ENST00000625243 EN1Q05925 392 aaPredicted RBP8.5□□□□□ -1.05
CHD2-203ENST00000625243 NBR1Q14596 966 aa8.5□□□□□ -1.05
CHD2-203ENST00000625243 ZNF787Q6DD87 383 aa8.5□□□□□ -1.05
CHD2-203ENST00000625243 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.49□□□□□ -1.05
CHD2-203ENST00000625243 ZNF516Q92618 1163 aa8.48□□□□□ -1.05
CHD2-203ENST00000625243 CDCA7LQ96GN5 454 aa8.48□□□□□ -1.05
CHD2-203ENST00000625243 PDZRN3Q9UPQ7 1066 aa8.48□□□□□ -1.05
CHD2-203ENST00000625243 PRSS12P56730 875 aa8.46□□□□□ -1.06
CHD2-203ENST00000625243 DCAF8L2P0C7V8 631 aa8.45□□□□□ -1.06
CHD2-203ENST00000625243 FAM198AQ9UFP1 575 aa8.45□□□□□ -1.06
CHD2-203ENST00000625243 RNF40O75150 1001 aa8.44□□□□□ -1.06
CHD2-203ENST00000625243 TATDN2Q93075 761 aa8.44□□□□□ -1.06
CHD2-203ENST00000625243 PNMA3Q9UL41 463 aa8.44□□□□□ -1.06
CHD2-203ENST00000625243 C3orf80F5H4A9 247 aa8.43□□□□□ -1.06
CHD2-203ENST00000625243 HDGFP51858 240 aaKnown RBP8.43□□□□□ -1.06
CHD2-203ENST00000625243 NKX2-3Q8TAU0 364 aa8.43□□□□□ -1.06
CHD2-203ENST00000625243 NBPF26B4DH59 902 aa8.42□□□□□ -1.06
CHD2-203ENST00000625243 APLP1P51693 650 aa8.42□□□□□ -1.06
CHD2-203ENST00000625243 PDIA6Q15084 440 aa8.42□□□□□ -1.06
CHD2-203ENST00000625243 CERKQ8TCT0 537 aa8.42□□□□□ -1.06
CHD2-203ENST00000625243 ZNF775Q96BV0 537 aaPredicted RBP8.42□□□□□ -1.06
CHD2-203ENST00000625243 GGCXP38435 758 aa8.41□□□□□ -1.06
CHD2-203ENST00000625243 SPDYE16A6NNV3 312 aaPredicted RBP8.39□□□□□ -1.07
CHD2-203ENST00000625243 NUDT18Q6ZVK8 323 aa8.39□□□□□ -1.07
CHD2-203ENST00000625243 PRIM1P49642 420 aaKnown RBP8.38□□□□□ -1.07
CHD2-203ENST00000625243 COPS2P61201 443 aa8.38□□□□□ -1.07
CHD2-203ENST00000625243 GRXCR2A6NFK2 248 aa8.36□□□□□ -1.07
CHD2-203ENST00000625243 TMUB1Q9BVT8 246 aa8.36□□□□□ -1.07
CHD2-203ENST00000625243 NECTIN2Q92692 538 aa8.35□□□□□ -1.07
CHD2-203ENST00000625243 SWT1Q5T5J6 900 aaKnown RBP8.33□□□□□ -1.08
CHD2-203ENST00000625243 SLF2Q8IX21 1173 aa8.33□□□□□ -1.08
CHD2-203ENST00000625243 CDHR5Q9HBB8 845 aa8.33□□□□□ -1.08
CHD2-203ENST00000625243 ZPR1O75312 459 aa8.32□□□□□ -1.08
CHD2-203ENST00000625243 SLC19A1P41440 591 aa8.32□□□□□ -1.08
CHD2-203ENST00000625243 PKDCCQ504Y2 493 aa8.32□□□□□ -1.08
CHD2-203ENST00000625243 TRIM67Q6ZTA4 783 aa8.32□□□□□ -1.08
CHD2-203ENST00000625243 RBM27Q9P2N5 1060 aaKnown RBP8.31□□□□□ -1.08
CHD2-203ENST00000625243 MYT1Q01538 1121 aa8.3□□□□□ -1.08
CHD2-203ENST00000625243 RNF223E7ERA6 249 aa8.29□□□□□ -1.08
CHD2-203ENST00000625243 DGAT1O75907 488 aa8.29□□□□□ -1.08
CHD2-203ENST00000625243 OSBPP22059 807 aa8.29□□□□□ -1.08
CHD2-203ENST00000625243 SLC4A3P48751 1232 aa8.29□□□□□ -1.08
CHD2-203ENST00000625243 POTECB2RU33 542 aa8.28□□□□□ -1.08
CHD2-203ENST00000625243 E2F4Q16254 413 aa8.28□□□□□ -1.08
CHD2-203ENST00000625243 PADI6Q6TGC4 694 aa8.27□□□□□ -1.09
CHD2-203ENST00000625243 TTC13Q8NBP0 860 aa8.27□□□□□ -1.09
CHD2-203ENST00000625243 EMID1Q96A84 441 aaPredicted RBP8.27□□□□□ -1.09
CHD2-203ENST00000625243 PCDHB3Q9Y5E6 796 aa8.27□□□□□ -1.09
CHD2-203ENST00000625243 SPRYD7Q5W111 196 aa8.26□□□□□ -1.09
CHD2-203ENST00000625243 PRR14Q9BWN1 585 aa8.26□□□□□ -1.09
CHD2-203ENST00000625243 ZNF598Q86UK7 904 aaKnown RBP8.25□□□□□ -1.09
CHD2-203ENST00000625243 ARIH1Q9Y4X5 557 aaPredicted RBP8.25□□□□□ -1.09
CHD2-203ENST00000625243 PRR20EP86478 221 aa8.24□□□□□ -1.09
CHD2-203ENST00000625243 PRR20CP86479 221 aa8.24□□□□□ -1.09
CHD2-203ENST00000625243 PRR20DP86480 221 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms