RNA–Protein interactions for RNA: ENST00000625237.1

LINC01440-207, Transcript of long intergenic non-protein coding RNA 1440, humanhuman

TSL 5

Gene LINC01440, Length 622 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01440-207ENST00000625237 CERKQ8TCT0 537 aa11.6□□□□□ -0.55
LINC01440-207ENST00000625237 NPDC1Q9NQX5 325 aaPredicted RBP11.6□□□□□ -0.55
LINC01440-207ENST00000625237 IL27Q8NEV9 243 aa11.59□□□□□ -0.55
LINC01440-207ENST00000625237 TIMELESSQ9UNS1 1208 aa11.59□□□□□ -0.55
LINC01440-207ENST00000625237 HOXB3P14651 431 aaPredicted RBP11.58□□□□□ -0.56
LINC01440-207ENST00000625237 ZDHHC16Q969W1 377 aa11.58□□□□□ -0.56
LINC01440-207ENST00000625237 NUDT7P0C024 238 aa11.57□□□□□ -0.56
LINC01440-207ENST00000625237 TSR1Q2NL82 804 aaKnown RBP11.57□□□□□ -0.56
LINC01440-207ENST00000625237 ARSIQ5FYB1 569 aa11.57□□□□□ -0.56
LINC01440-207ENST00000625237 ZNF710Q8N1W2 664 aa11.57□□□□□ -0.56
LINC01440-207ENST00000625237 DDRGK1Q96HY6 314 aa11.57□□□□□ -0.56
LINC01440-207ENST00000625237 PARP9Q8IXQ6 854 aa11.56□□□□□ -0.56
LINC01440-207ENST00000625237 ZNF454Q8N9F8 522 aa11.56□□□□□ -0.56
LINC01440-207ENST00000625237 TTLL12Q14166 644 aaPredicted RBP11.55□□□□□ -0.56
LINC01440-207ENST00000625237 C6orf132Q5T0Z8 1188 aa11.54□□□□□ -0.56
LINC01440-207ENST00000625237 GPR153Q6NV75 609 aa11.54□□□□□ -0.56
LINC01440-207ENST00000625237 PSDA5PKW4 1024 aaPredicted RBP11.53□□□□□ -0.56
LINC01440-207ENST00000625237 SNPHO15079 494 aa11.53□□□□□ -0.56
LINC01440-207ENST00000625237 C14orf37Q86TY3 774 aa11.51□□□□□ -0.57
LINC01440-207ENST00000625237 KHSRPQ92945 711 aaKnown RBP eCLIP11.51□□□□□ -0.57
LINC01440-207ENST00000625237 FAM117AQ9C073 453 aa11.51□□□□□ -0.57
LINC01440-207ENST00000625237 RBM27Q9P2N5 1060 aaKnown RBP11.51□□□□□ -0.57
LINC01440-207ENST00000625237 OATP04181 439 aa11.49□□□□□ -0.57
LINC01440-207ENST00000625237 CLCN1P35523 988 aa11.49□□□□□ -0.57
LINC01440-207ENST00000625237 PPP4R3BQ5MIZ7 849 aa11.48□□□□□ -0.57
LINC01440-207ENST00000625237 GIGYF2Q6Y7W6 1299 aaKnown RBP11.48□□□□□ -0.57
LINC01440-207ENST00000625237 ADAM33Q9BZ11 813 aa11.48□□□□□ -0.57
LINC01440-207ENST00000625237 LHX6Q9UPM6 363 aa11.47□□□□□ -0.57
LINC01440-207ENST00000625237 PADI6Q6TGC4 694 aa11.46□□□□□ -0.57
LINC01440-207ENST00000625237 GPCPD1Q9NPB8 672 aa11.45□□□□□ -0.58
LINC01440-207ENST00000625237 PLEKHG3A1L390 1219 aa11.44□□□□□ -0.58
LINC01440-207ENST00000625237 PRSS12P56730 875 aa11.44□□□□□ -0.58
LINC01440-207ENST00000625237 METTL3Q86U44 580 aaKnown RBP11.43□□□□□ -0.58
LINC01440-207ENST00000625237 TTC13Q8NBP0 860 aa11.43□□□□□ -0.58
LINC01440-207ENST00000625237 HOXB1P14653 301 aaPredicted RBP11.42□□□□□ -0.58
LINC01440-207ENST00000625237 MDM2Q00987 491 aaPredicted RBP11.42□□□□□ -0.58
LINC01440-207ENST00000625237 TMUB1Q9BVT8 246 aa11.42□□□□□ -0.58
LINC01440-207ENST00000625237 BCL2L12Q9HB09 334 aa11.42□□□□□ -0.58
LINC01440-207ENST00000625237 ADGRG1Q9Y653 693 aa11.42□□□□□ -0.58
LINC01440-207ENST00000625237 PXYLP1Q8TE99 480 aa11.41□□□□□ -0.58
LINC01440-207ENST00000625237 CDCA7LQ96GN5 454 aa11.41□□□□□ -0.58
LINC01440-207ENST00000625237 GOPCQ9HD26 462 aa11.41□□□□□ -0.58
LINC01440-207ENST00000625237 MS4A1P11836 297 aa11.4□□□□□ -0.58
LINC01440-207ENST00000625237 PTPREP23469 700 aa11.4□□□□□ -0.58
LINC01440-207ENST00000625237 RBM46Q8TBY0 533 aaKnown RBP11.4□□□□□ -0.58
LINC01440-207ENST00000625237 REPIN1Q9BWE0 567 aaKnown RBP11.4□□□□□ -0.58
LINC01440-207ENST00000625237 PHOX2BQ99453 314 aa11.39□□□□□ -0.59
LINC01440-207ENST00000625237 PPP1R3GB7ZBB8 358 aa11.38□□□□□ -0.59
LINC01440-207ENST00000625237 SSTR3P32745 418 aaPredicted RBP11.38□□□□□ -0.59
LINC01440-207ENST00000625237 FAM161AQ3B820 660 aa11.37□□□□□ -0.59
LINC01440-207ENST00000625237 OTUD5Q96G74 571 aa11.35□□□□□ -0.59
LINC01440-207ENST00000625237 KCNH8Q96L42 1107 aa11.35□□□□□ -0.59
LINC01440-207ENST00000625237 FAM217BQ9NTX9 383 aaPredicted RBP11.35□□□□□ -0.59
LINC01440-207ENST00000625237 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.34□□□□□ -0.59
LINC01440-207ENST00000625237 COL9A1P20849 921 aa11.34□□□□□ -0.59
LINC01440-207ENST00000625237 PCMTD1Q96MG8 357 aaPredicted RBP11.34□□□□□ -0.59
LINC01440-207ENST00000625237 RSPH6AQ9H0K4 717 aa11.34□□□□□ -0.59
LINC01440-207ENST00000625237 NBPF26B4DH59 902 aa11.31□□□□□ -0.6
LINC01440-207ENST00000625237 SH3D19Q5HYK7 790 aa11.31□□□□□ -0.6
LINC01440-207ENST00000625237 PACS2Q86VP3 889 aa11.31□□□□□ -0.6
LINC01440-207ENST00000625237 BEGAINQ9BUH8 593 aa11.31□□□□□ -0.6
LINC01440-207ENST00000625237 TRIM6-TRIM34B2RNG4 842 aa11.3□□□□□ -0.6
LINC01440-207ENST00000625237 ONECUT3O60422 494 aaPredicted RBP11.3□□□□□ -0.6
LINC01440-207ENST00000625237 LHX8Q68G74 356 aa11.29□□□□□ -0.6
LINC01440-207ENST00000625237 NLRP7Q8WX94 980 aa11.29□□□□□ -0.6
LINC01440-207ENST00000625237 FAM198AQ9UFP1 575 aa11.29□□□□□ -0.6
LINC01440-207ENST00000625237 TSKSQ9UJT2 592 aa11.29□□□□□ -0.6
LINC01440-207ENST00000625237 DIXDC1Q155Q3 683 aa11.28□□□□□ -0.6
LINC01440-207ENST00000625237 EYA1Q99502 592 aa11.28□□□□□ -0.6
LINC01440-207ENST00000625237 RCCD1A6NED2 376 aa11.27□□□□□ -0.61
LINC01440-207ENST00000625237 SKIV2LQ15477 1246 aaKnown RBP11.27□□□□□ -0.61
LINC01440-207ENST00000625237 NUDT18Q6ZVK8 323 aa11.27□□□□□ -0.61
LINC01440-207ENST00000625237 DNAJB2P25686 324 aa11.26□□□□□ -0.61
LINC01440-207ENST00000625237 SULF1Q8IWU6 871 aa11.26□□□□□ -0.61
LINC01440-207ENST00000625237 TATDN2Q93075 761 aa11.26□□□□□ -0.61
LINC01440-207ENST00000625237 KCNK17Q96T54 332 aa11.26□□□□□ -0.61
LINC01440-207ENST00000625237 PNMA3Q9UL41 463 aa11.26□□□□□ -0.61
LINC01440-207ENST00000625237 FLIIQ13045 1269 aa11.25□□□□□ -0.61
LINC01440-207ENST00000625237 ERBB3P21860 1342 aa11.22□□□□□ -0.61
LINC01440-207ENST00000625237 ATP1B4Q9UN42 357 aaPredicted RBP11.22□□□□□ -0.61
LINC01440-207ENST00000625237 TMEM134Q9H6X4 195 aa11.21□□□□□ -0.61
LINC01440-207ENST00000625237 PROX2Q3B8N5 592 aa11.2□□□□□ -0.62
LINC01440-207ENST00000625237 ZBED2Q9BTP6 218 aa11.2□□□□□ -0.62
LINC01440-207ENST00000625237 ZMYND15Q9H091 742 aa11.2□□□□□ -0.62
LINC01440-207ENST00000625237 ARHGAP33O14559 1287 aa11.19□□□□□ -0.62
LINC01440-207ENST00000625237 CD46P15529 392 aa11.19□□□□□ -0.62
LINC01440-207ENST00000625237 MYSM1Q5VVJ2 828 aa11.19□□□□□ -0.62
LINC01440-207ENST00000625237 VARS2Q5ST30 1063 aaKnown RBP11.18□□□□□ -0.62
LINC01440-207ENST00000625237 SLC4A5Q9BY07 1137 aa11.18□□□□□ -0.62
LINC01440-207ENST00000625237 TBC1D2Q9BYX2 928 aa11.18□□□□□ -0.62
LINC01440-207ENST00000625237 DDX11L8A8MPP1 907 aa11.17□□□□□ -0.62
LINC01440-207ENST00000625237 C3orf80F5H4A9 247 aa11.17□□□□□ -0.62
LINC01440-207ENST00000625237 PBX2P40425 430 aa11.17□□□□□ -0.62
LINC01440-207ENST00000625237 CLK2P49760 499 aaKnown RBP11.17□□□□□ -0.62
LINC01440-207ENST00000625237 KIAA1468Q9P260 1216 aa11.17□□□□□ -0.62
LINC01440-207ENST00000625237 RSPH4AQ5TD94 716 aa11.16□□□□□ -0.62
LINC01440-207ENST00000625237 POLR3EQ9NVU0 708 aa11.16□□□□□ -0.62
LINC01440-207ENST00000625237 RABGEF1Q9UJ41 708 aa11.16□□□□□ -0.62
LINC01440-207ENST00000625237 PSEN2P49810 448 aa11.15□□□□□ -0.62
LINC01440-207ENST00000625237 NUTM1Q86Y26 1132 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms