RNA–Protein interactions for RNA: ENST00000625222.1

LINC01230-201, Transcript of long intergenic non-protein coding RNA 1230, humanhuman

BASIC

Gene LINC01230, Length 3,017 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01230-201ENST00000625222 ATP10BO94823 1461 aa19.83■□□□□ 0.77
LINC01230-201ENST00000625222 RALGAPBQ86X10 1494 aa19.83■□□□□ 0.77
LINC01230-201ENST00000625222 MAGI1Q96QZ7 1491 aaPredicted RBP19.83■□□□□ 0.76
LINC01230-201ENST00000625222 RRP1P56182 461 aaKnown RBP19.83■□□□□ 0.76
LINC01230-201ENST00000625222 RALBP1Q15311 655 aa19.82■□□□□ 0.76
LINC01230-201ENST00000625222 SYNJ2O15056 1496 aa19.82■□□□□ 0.76
LINC01230-201ENST00000625222 POLR1AO95602 1720 aaPredicted RBP19.82■□□□□ 0.76
LINC01230-201ENST00000625222 ARID4BQ4LE39 1312 aaPredicted RBP19.81■□□□□ 0.76
LINC01230-201ENST00000625222 KTN1Q86UP2 1357 aaKnown RBP19.8■□□□□ 0.76
LINC01230-201ENST00000625222 ZBTB47Q9UFB7 747 aaPredicted RBP19.79■□□□□ 0.76
LINC01230-201ENST00000625222 NLRP13Q86W25 1043 aa19.79■□□□□ 0.76
LINC01230-201ENST00000625222 RNF123Q5XPI4 1314 aa19.78■□□□□ 0.76
LINC01230-201ENST00000625222 CCDC144AA2RUR9 1427 aa19.78■□□□□ 0.76
LINC01230-201ENST00000625222 BRD4O60885 1362 aaPredicted RBP19.78■□□□□ 0.76
LINC01230-201ENST00000625222 PANK3Q9H999 370 aa19.78■□□□□ 0.76
LINC01230-201ENST00000625222 UHRF1BP1Q6BDS2 1440 aa19.77■□□□□ 0.76
LINC01230-201ENST00000625222 CROCC2H7BZ55 1655 aa19.76■□□□□ 0.75
LINC01230-201ENST00000625222 IPO9Q96P70 1041 aaKnown RBP19.75■□□□□ 0.75
LINC01230-201ENST00000625222 CDC42BPAQ5VT25 1732 aa19.75■□□□□ 0.75
LINC01230-201ENST00000625222 PTPRGP23470 1445 aa19.75■□□□□ 0.75
LINC01230-201ENST00000625222 ABCC10Q5T3U5 1492 aa19.74■□□□□ 0.75
LINC01230-201ENST00000625222 LAS1LQ9Y4W2 734 aaKnown RBP19.73■□□□□ 0.75
LINC01230-201ENST00000625222 LRPPRCP42704 1394 aaKnown RBP19.73■□□□□ 0.75
LINC01230-201ENST00000625222 DISP3Q9P2K9 1392 aa19.72■□□□□ 0.75
LINC01230-201ENST00000625222 RTL5Q5HYW3 569 aaPredicted RBP19.71■□□□□ 0.75
LINC01230-201ENST00000625222 ADCY10Q96PN6 1610 aa19.69■□□□□ 0.74
LINC01230-201ENST00000625222 FAM135AQ9P2D6 1515 aa19.69■□□□□ 0.74
LINC01230-201ENST00000625222 CRBNQ96SW2 442 aa19.68■□□□□ 0.74
LINC01230-201ENST00000625222 NUP160Q12769 1436 aa19.68■□□□□ 0.74
LINC01230-201ENST00000625222 ARHGEF12Q9NZN5 1544 aa19.68■□□□□ 0.74
LINC01230-201ENST00000625222 MYT1LQ9UL68 1186 aa19.68■□□□□ 0.74
LINC01230-201ENST00000625222 PRAG1Q86YV5 1406 aa19.67■□□□□ 0.74
LINC01230-201ENST00000625222 PER1O15534 1290 aaPredicted RBP19.67■□□□□ 0.74
LINC01230-201ENST00000625222 CCDC141Q6ZP82 1450 aa19.67■□□□□ 0.74
LINC01230-201ENST00000625222 SHANK2Q9UPX8 1470 aa19.66■□□□□ 0.74
LINC01230-201ENST00000625222 PDE4AP27815 886 aa19.66■□□□□ 0.74
LINC01230-201ENST00000625222 TMF1P82094 1093 aa19.66■□□□□ 0.74
LINC01230-201ENST00000625222 ABCA8O94911 1581 aa19.65■□□□□ 0.74
LINC01230-201ENST00000625222 C20orf194Q5TEA3 1177 aa19.65■□□□□ 0.74
LINC01230-201ENST00000625222 TESK2Q96S53 571 aa19.65■□□□□ 0.74
LINC01230-201ENST00000625222 PARD3Q8TEW0 1356 aa19.64■□□□□ 0.74
LINC01230-201ENST00000625222 ARHGAP5Q13017 1502 aa19.64■□□□□ 0.73
LINC01230-201ENST00000625222 ADAMTS8Q9UP79 889 aa19.64■□□□□ 0.73
LINC01230-201ENST00000625222 PLEKHH2Q8IVE3 1493 aa19.63■□□□□ 0.73
LINC01230-201ENST00000625222 SYCP2Q9BX26 1530 aa19.63■□□□□ 0.73
LINC01230-201ENST00000625222 A2MP01023 1474 aa19.62■□□□□ 0.73
LINC01230-201ENST00000625222 KDM5DQ9BY66 1539 aa19.61■□□□□ 0.73
LINC01230-201ENST00000625222 SAMD9LQ8IVG5 1584 aa19.61■□□□□ 0.73
LINC01230-201ENST00000625222 WDR43Q15061 677 aaKnown RBP eCLIP19.61■□□□□ 0.73
LINC01230-201ENST00000625222 CCDC146Q8IYE0 955 aa19.6■□□□□ 0.73
LINC01230-201ENST00000625222 KNSTRNQ9Y448 316 aa19.6■□□□□ 0.73
LINC01230-201ENST00000625222 PLA2R1Q13018 1463 aa19.6■□□□□ 0.73
LINC01230-201ENST00000625222 TCERG1O14776 1098 aaKnown RBP19.6■□□□□ 0.73
LINC01230-201ENST00000625222 ERBINQ96RT1 1412 aa19.6■□□□□ 0.73
LINC01230-201ENST00000625222 PDE3BQ13370 1112 aa19.59■□□□□ 0.73
LINC01230-201ENST00000625222 RSPH4AQ5TD94 716 aa19.56■□□□□ 0.72
LINC01230-201ENST00000625222 SLC4A3P48751 1232 aa19.55■□□□□ 0.72
LINC01230-201ENST00000625222 BACH2Q9BYV9 841 aa19.54■□□□□ 0.72
LINC01230-201ENST00000625222 COL17A1Q9UMD9 1497 aaPredicted RBP19.53■□□□□ 0.72
LINC01230-201ENST00000625222 NEFMP07197 916 aa19.53■□□□□ 0.72
LINC01230-201ENST00000625222 TRPM1Q7Z4N2 1603 aa19.53■□□□□ 0.72
LINC01230-201ENST00000625222 CDC42BPBQ9Y5S2 1711 aa19.52■□□□□ 0.72
LINC01230-201ENST00000625222 AFAP1Q8N556 730 aa19.52■□□□□ 0.72
LINC01230-201ENST00000625222 PPP2R1AP30153 589 aa19.52■□□□□ 0.72
LINC01230-201ENST00000625222 RGS3P49796 1198 aa19.51■□□□□ 0.71
LINC01230-201ENST00000625222 ARHGEF5Q12774 1597 aa19.51■□□□□ 0.71
LINC01230-201ENST00000625222 TTC37Q6PGP7 1564 aa19.5■□□□□ 0.71
LINC01230-201ENST00000625222 E9PCH4 1651 aa19.5■□□□□ 0.71
LINC01230-201ENST00000625222 SENP3Q9H4L4 574 aaPredicted RBP19.49■□□□□ 0.71
LINC01230-201ENST00000625222 PLEKHH1Q9ULM0 1364 aa19.48■□□□□ 0.71
LINC01230-201ENST00000625222 TNNT2P45379 298 aaPredicted RBP19.47■□□□□ 0.71
LINC01230-201ENST00000625222 GPRASP1Q5JY77 1395 aa19.47■□□□□ 0.71
LINC01230-201ENST00000625222 EFCAB2Q5VUJ9 269 aa19.46■□□□□ 0.71
LINC01230-201ENST00000625222 PREX2Q70Z35 1606 aa19.46■□□□□ 0.71
LINC01230-201ENST00000625222 CHGAP10645 457 aaKnown RBP19.46■□□□□ 0.71
LINC01230-201ENST00000625222 RTN4Q9NQC3 1192 aaKnown RBP19.46■□□□□ 0.71
LINC01230-201ENST00000625222 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.45■□□□□ 0.7
LINC01230-201ENST00000625222 APAF1O14727 1248 aa19.45■□□□□ 0.7
LINC01230-201ENST00000625222 GOLGA2Q08379 1002 aa19.44■□□□□ 0.7
LINC01230-201ENST00000625222 NEUROD2Q15784 382 aa19.44■□□□□ 0.7
LINC01230-201ENST00000625222 SPAG9O60271 1321 aaKnown RBP19.44■□□□□ 0.7
LINC01230-201ENST00000625222 MAGI2Q86UL8 1455 aa19.44■□□□□ 0.7
LINC01230-201ENST00000625222 DAXXQ9UER7 740 aaPredicted RBP19.43■□□□□ 0.7
LINC01230-201ENST00000625222 BLMP54132 1417 aaPredicted RBP19.43■□□□□ 0.7
LINC01230-201ENST00000625222 WASHC2CQ9Y4E1 1318 aa19.43■□□□□ 0.7
LINC01230-201ENST00000625222 MS4A1P11836 297 aa19.43■□□□□ 0.7
LINC01230-201ENST00000625222 DUSP27Q5VZP5 1158 aa19.43■□□□□ 0.7
LINC01230-201ENST00000625222 ERCC6L2Q5T890 1561 aa19.42■□□□□ 0.7
LINC01230-201ENST00000625222 AMER1Q5JTC6 1135 aaPredicted RBP19.42■□□□□ 0.7
LINC01230-201ENST00000625222 PRDM15P57071 1507 aaPredicted RBP19.42■□□□□ 0.7
LINC01230-201ENST00000625222 TRAPPC8Q9Y2L5 1435 aa19.41■□□□□ 0.7
LINC01230-201ENST00000625222 CFAP70Q5T0N1 1121 aa19.41■□□□□ 0.7
LINC01230-201ENST00000625222 SPINK5Q9NQ38 1064 aaPredicted RBP19.41■□□□□ 0.7
LINC01230-201ENST00000625222 KIF3BO15066 747 aa19.41■□□□□ 0.7
LINC01230-201ENST00000625222 BCAR3O75815 825 aa19.4■□□□□ 0.7
LINC01230-201ENST00000625222 MYO5CQ9NQX4 1742 aa19.38■□□□□ 0.69
LINC01230-201ENST00000625222 CANXP27824 592 aaKnown RBP19.37■□□□□ 0.69
LINC01230-201ENST00000625222 RRP7AQ9Y3A4 280 aaKnown RBP19.36■□□□□ 0.69
LINC01230-201ENST00000625222 ZMYM4Q5VZL5 1548 aa19.36■□□□□ 0.69
LINC01230-201ENST00000625222 CDCA8Q53HL2 280 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms