RNA–Protein interactions for RNA: ENST00000624766.1

ATRX-218, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 2

Gene ATRX, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-218ENST00000624766 CADPS2Q86UW7 1296 aa10.75□□□□□ -0.69
ATRX-218ENST00000624766 TYW1BQ6NUM6 668 aa10.74□□□□□ -0.69
ATRX-218ENST00000624766 SEPT9Q9UHD8 586 aaPredicted RBP10.74□□□□□ -0.69
ATRX-218ENST00000624766 RGS20O76081 388 aa10.73□□□□□ -0.69
ATRX-218ENST00000624766 KIAA1468Q9P260 1216 aa10.73□□□□□ -0.69
ATRX-218ENST00000624766 FBXW7Q969H0 707 aa10.71□□□□□ -0.69
ATRX-218ENST00000624766 RBM33Q96EV2 1170 aaKnown RBP10.71□□□□□ -0.69
ATRX-218ENST00000624766 PHF14O94880 888 aa10.7□□□□□ -0.7
ATRX-218ENST00000624766 DPYSL4O14531 572 aa10.69□□□□□ -0.7
ATRX-218ENST00000624766 ZFRQ96KR1 1074 aaKnown RBP10.69□□□□□ -0.7
ATRX-218ENST00000624766 SOWAHBA6NEL2 793 aa10.68□□□□□ -0.7
ATRX-218ENST00000624766 WBP1LQ9NX94 342 aa10.68□□□□□ -0.7
ATRX-218ENST00000624766 C6orf132Q5T0Z8 1188 aa10.66□□□□□ -0.7
ATRX-218ENST00000624766 DDX12PQ92771 950 aa10.66□□□□□ -0.7
ATRX-218ENST00000624766 ITGBL1O95965 494 aaPredicted RBP10.65□□□□□ -0.7
ATRX-218ENST00000624766 LAPTM4BQ86VI4 370 aa10.65□□□□□ -0.7
ATRX-218ENST00000624766 Q6ZNB5 142 aa10.63□□□□□ -0.71
ATRX-218ENST00000624766 TRIM6-TRIM34B2RNG4 842 aa10.62□□□□□ -0.71
ATRX-218ENST00000624766 KCNC4Q03721 635 aa10.62□□□□□ -0.71
ATRX-218ENST00000624766 HPS5Q9UPZ3 1129 aa10.62□□□□□ -0.71
ATRX-218ENST00000624766 EPAS1Q99814 870 aa10.61□□□□□ -0.71
ATRX-218ENST00000624766 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.61□□□□□ -0.71
ATRX-218ENST00000624766 LRCH3Q96II8 777 aa10.6□□□□□ -0.71
ATRX-218ENST00000624766 FAM98CQ17RN3 349 aaKnown RBP10.59□□□□□ -0.71
ATRX-218ENST00000624766 NBR1Q14596 966 aa10.58□□□□□ -0.72
ATRX-218ENST00000624766 NYAP1Q6ZVC0 841 aa10.58□□□□□ -0.72
ATRX-218ENST00000624766 MAP3K7O43318 606 aa10.57□□□□□ -0.72
ATRX-218ENST00000624766 TSR1Q2NL82 804 aaKnown RBP10.57□□□□□ -0.72
ATRX-218ENST00000624766 TSR3Q9UJK0 312 aaKnown RBP10.57□□□□□ -0.72
ATRX-218ENST00000624766 CAMK2BQ13554 666 aa10.56□□□□□ -0.72
ATRX-218ENST00000624766 SMAPO00193 183 aa10.54□□□□□ -0.72
ATRX-218ENST00000624766 ONECUT3O60422 494 aaPredicted RBP10.54□□□□□ -0.72
ATRX-218ENST00000624766 TSKSQ9UJT2 592 aa10.53□□□□□ -0.72
ATRX-218ENST00000624766 PACS2Q86VP3 889 aa10.52□□□□□ -0.73
ATRX-218ENST00000624766 PPP4CP60510 307 aa10.51□□□□□ -0.73
ATRX-218ENST00000624766 EN1Q05925 392 aaPredicted RBP10.51□□□□□ -0.73
ATRX-218ENST00000624766 RNF40O75150 1001 aa10.49□□□□□ -0.73
ATRX-218ENST00000624766 SAMD7Q7Z3H4 446 aa10.49□□□□□ -0.73
ATRX-218ENST00000624766 GRXCR2A6NFK2 248 aa10.46□□□□□ -0.73
ATRX-218ENST00000624766 GFRA3O60609 400 aa10.46□□□□□ -0.73
ATRX-218ENST00000624766 CDCA7LQ96GN5 454 aa10.46□□□□□ -0.73
ATRX-218ENST00000624766 PDIA6Q15084 440 aa10.44□□□□□ -0.74
ATRX-218ENST00000624766 FAM198AQ9UFP1 575 aa10.44□□□□□ -0.74
ATRX-218ENST00000624766 C3orf80F5H4A9 247 aa10.43□□□□□ -0.74
ATRX-218ENST00000624766 PRKD2Q9BZL6 878 aa10.43□□□□□ -0.74
ATRX-218ENST00000624766 PNMA3Q9UL41 463 aa10.43□□□□□ -0.74
ATRX-218ENST00000624766 PRIM1P49642 420 aaKnown RBP10.42□□□□□ -0.74
ATRX-218ENST00000624766 PRSS12P56730 875 aa10.42□□□□□ -0.74
ATRX-218ENST00000624766 MTRQ99707 1265 aa10.42□□□□□ -0.74
ATRX-218ENST00000624766 TJAP1Q5JTD0 557 aa10.41□□□□□ -0.74
ATRX-218ENST00000624766 TATDN2Q93075 761 aa10.4□□□□□ -0.74
ATRX-218ENST00000624766 SPDYE16A6NNV3 312 aaPredicted RBP10.39□□□□□ -0.75
ATRX-218ENST00000624766 NBPF26B4DH59 902 aa10.39□□□□□ -0.75
ATRX-218ENST00000624766 CDHR5Q9HBB8 845 aa10.39□□□□□ -0.75
ATRX-218ENST00000624766 LCE2BO14633 110 aa10.38□□□□□ -0.75
ATRX-218ENST00000624766 LAPTM4AQ15012 233 aa10.38□□□□□ -0.75
ATRX-218ENST00000624766 PPP1R18Q6NYC8 613 aa10.38□□□□□ -0.75
ATRX-218ENST00000624766 ZNF516Q92618 1163 aa10.38□□□□□ -0.75
ATRX-218ENST00000624766 IL21Q9HBE4 155 aa10.38□□□□□ -0.75
ATRX-218ENST00000624766 TRAF7Q6Q0C0 670 aa10.37□□□□□ -0.75
ATRX-218ENST00000624766 NUDT18Q6ZVK8 323 aa10.37□□□□□ -0.75
ATRX-218ENST00000624766 BBXQ8WY36 941 aaPredicted RBP10.37□□□□□ -0.75
ATRX-218ENST00000624766 E2F4Q16254 413 aa10.36□□□□□ -0.75
ATRX-218ENST00000624766 HDGFP51858 240 aaKnown RBP10.35□□□□□ -0.75
ATRX-218ENST00000624766 APLP1P51693 650 aa10.34□□□□□ -0.75
ATRX-218ENST00000624766 CERKQ8TCT0 537 aa10.34□□□□□ -0.75
ATRX-218ENST00000624766 COPS2P61201 443 aa10.33□□□□□ -0.76
ATRX-218ENST00000624766 SPRYD3Q8NCJ5 442 aa10.33□□□□□ -0.76
ATRX-218ENST00000624766 NKX2-3Q8TAU0 364 aa10.33□□□□□ -0.76
ATRX-218ENST00000624766 WDR70Q9NW82 654 aa10.33□□□□□ -0.76
ATRX-218ENST00000624766 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.31□□□□□ -0.76
ATRX-218ENST00000624766 CFAP44Q96MT7 982 aa10.3□□□□□ -0.76
ATRX-218ENST00000624766 NRG2O14511 850 aaPredicted RBP10.29□□□□□ -0.76
ATRX-218ENST00000624766 OSBPP22059 807 aa10.29□□□□□ -0.76
ATRX-218ENST00000624766 SWT1Q5T5J6 900 aaKnown RBP10.29□□□□□ -0.76
ATRX-218ENST00000624766 PADI6Q6TGC4 694 aa10.28□□□□□ -0.76
ATRX-218ENST00000624766 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.28□□□□□ -0.76
ATRX-218ENST00000624766 PDZRN3Q9UPQ7 1066 aa10.27□□□□□ -0.77
ATRX-218ENST00000624766 PAXIP1Q6ZW49 1069 aaPredicted RBP10.26□□□□□ -0.77
ATRX-218ENST00000624766 V9GY48 417 aaPredicted RBP10.26□□□□□ -0.77
ATRX-218ENST00000624766 GGCXP38435 758 aa10.23□□□□□ -0.77
ATRX-218ENST00000624766 SLF2Q8IX21 1173 aa10.23□□□□□ -0.77
ATRX-218ENST00000624766 ZNF787Q6DD87 383 aa10.21□□□□□ -0.77
ATRX-218ENST00000624766 RBM27Q9P2N5 1060 aaKnown RBP10.21□□□□□ -0.77
ATRX-218ENST00000624766 SLC4A3P48751 1232 aa10.2□□□□□ -0.78
ATRX-218ENST00000624766 NECTIN2Q92692 538 aa10.19□□□□□ -0.78
ATRX-218ENST00000624766 NPDC1Q9NQX5 325 aaPredicted RBP10.19□□□□□ -0.78
ATRX-218ENST00000624766 ARIH1Q9Y4X5 557 aaPredicted RBP10.19□□□□□ -0.78
ATRX-218ENST00000624766 ZPR1O75312 459 aa10.18□□□□□ -0.78
ATRX-218ENST00000624766 PCDHB3Q9Y5E6 796 aa10.18□□□□□ -0.78
ATRX-218ENST00000624766 BLOC1S3Q6QNY0 202 aa10.17□□□□□ -0.78
ATRX-218ENST00000624766 TLL1O43897 1013 aa10.16□□□□□ -0.78
ATRX-218ENST00000624766 TTC13Q8NBP0 860 aa10.16□□□□□ -0.78
ATRX-218ENST00000624766 RNF223E7ERA6 249 aa10.13□□□□□ -0.79
ATRX-218ENST00000624766 SLC19A1P41440 591 aa10.13□□□□□ -0.79
ATRX-218ENST00000624766 EYA1Q99502 592 aa10.13□□□□□ -0.79
ATRX-218ENST00000624766 PPEF1O14829 653 aaPredicted RBP10.12□□□□□ -0.79
ATRX-218ENST00000624766 MLLT3P42568 568 aaPredicted RBP10.12□□□□□ -0.79
ATRX-218ENST00000624766 TMUB1Q9BVT8 246 aa10.12□□□□□ -0.79
ATRX-218ENST00000624766 PRR14Q9BWN1 585 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms