RNA–Protein interactions for RNA: ENST00000623364.3

CDKL5-204, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 3

Gene CDKL5, Length 483 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-204ENST00000623364 PLCH2O75038 1416 aa11.66□□□□□ -0.54
CDKL5-204ENST00000623364 IQGAP1P46940 1657 aa11.65□□□□□ -0.54
CDKL5-204ENST00000623364 C1QTNF8P60827 252 aa11.65□□□□□ -0.54
CDKL5-204ENST00000623364 PCDH10Q9P2E7 1040 aa11.65□□□□□ -0.54
CDKL5-204ENST00000623364 DEPDC5O75140 1603 aa11.64□□□□□ -0.55
CDKL5-204ENST00000623364 NHSL1Q5SYE7 1610 aa11.64□□□□□ -0.55
CDKL5-204ENST00000623364 AFF2P51816 1311 aa11.64□□□□□ -0.55
CDKL5-204ENST00000623364 THEMISQ8N1K5 641 aaPredicted RBP11.64□□□□□ -0.55
CDKL5-204ENST00000623364 NGLY1Q96IV0 654 aa11.64□□□□□ -0.55
CDKL5-204ENST00000623364 LRRC9Q6ZRR7 1453 aa11.63□□□□□ -0.55
CDKL5-204ENST00000623364 QTRT2Q9H974 415 aaKnown RBP11.63□□□□□ -0.55
CDKL5-204ENST00000623364 CLTCQ00610 1675 aaKnown RBP11.62□□□□□ -0.55
CDKL5-204ENST00000623364 FGD6Q6ZV73 1430 aa11.62□□□□□ -0.55
CDKL5-204ENST00000623364 MLH3Q9UHC1 1453 aa11.62□□□□□ -0.55
CDKL5-204ENST00000623364 ABCC1P33527 1531 aa11.61□□□□□ -0.55
CDKL5-204ENST00000623364 KDM5DQ9BY66 1539 aa11.61□□□□□ -0.55
CDKL5-204ENST00000623364 XIRP1Q702N8 1843 aaKnown RBP11.61□□□□□ -0.55
CDKL5-204ENST00000623364 DCAF8L1A6NGE4 600 aa11.61□□□□□ -0.55
CDKL5-204ENST00000623364 CTTNBP2Q8WZ74 1663 aa11.6□□□□□ -0.55
CDKL5-204ENST00000623364 HRCP23327 699 aa11.6□□□□□ -0.55
CDKL5-204ENST00000623364 P3H3Q8IVL6 736 aa11.59□□□□□ -0.55
CDKL5-204ENST00000623364 ZNF784Q8NCA9 323 aaPredicted RBP11.58□□□□□ -0.56
CDKL5-204ENST00000623364 ITSN2Q9NZM3 1697 aa11.57□□□□□ -0.56
CDKL5-204ENST00000623364 NWD1Q149M9 1564 aa11.57□□□□□ -0.56
CDKL5-204ENST00000623364 NUP153P49790 1475 aaKnown RBP11.57□□□□□ -0.56
CDKL5-204ENST00000623364 COL16A1Q07092 1604 aaPredicted RBP11.57□□□□□ -0.56
CDKL5-204ENST00000623364 FAM135AQ9P2D6 1515 aa11.55□□□□□ -0.56
CDKL5-204ENST00000623364 TNRQ92752 1358 aa11.55□□□□□ -0.56
CDKL5-204ENST00000623364 PSDA5PKW4 1024 aaPredicted RBP11.55□□□□□ -0.56
CDKL5-204ENST00000623364 SLAIN2Q9P270 581 aa11.54□□□□□ -0.56
CDKL5-204ENST00000623364 EP400Q96L91 3159 aa11.54□□□□□ -0.56
CDKL5-204ENST00000623364 SHPRHQ149N8 1683 aa11.53□□□□□ -0.56
CDKL5-204ENST00000623364 TMEM94Q12767 1356 aa11.53□□□□□ -0.56
CDKL5-204ENST00000623364 MYO5CQ9NQX4 1742 aa11.52□□□□□ -0.57
CDKL5-204ENST00000623364 UGGT1Q9NYU2 1555 aa11.51□□□□□ -0.57
CDKL5-204ENST00000623364 EHMT2Q96KQ7 1210 aa11.51□□□□□ -0.57
CDKL5-204ENST00000623364 C8orf37Q96NL8 207 aa11.51□□□□□ -0.57
CDKL5-204ENST00000623364 CEP350Q5VT06 3117 aa11.51□□□□□ -0.57
CDKL5-204ENST00000623364 BLMP54132 1417 aaPredicted RBP11.51□□□□□ -0.57
CDKL5-204ENST00000623364 SF3B2Q13435 895 aaKnown RBP11.5□□□□□ -0.57
CDKL5-204ENST00000623364 GGT6Q6P531 493 aa11.5□□□□□ -0.57
CDKL5-204ENST00000623364 DEFB132Q7Z7B7 95 aa11.5□□□□□ -0.57
CDKL5-204ENST00000623364 ATP7AQ04656 1500 aa11.49□□□□□ -0.57
CDKL5-204ENST00000623364 KIF14Q15058 1648 aa11.49□□□□□ -0.57
CDKL5-204ENST00000623364 BCL9LQ86UU0 1499 aa11.48□□□□□ -0.57
CDKL5-204ENST00000623364 KIDINS220Q9ULH0 1771 aa11.47□□□□□ -0.57
CDKL5-204ENST00000623364 ZC3H13Q5T200 1668 aaKnown RBP11.47□□□□□ -0.57
CDKL5-204ENST00000623364 ARHGAP5Q13017 1502 aa11.47□□□□□ -0.57
CDKL5-204ENST00000623364 NLRP1Q9C000 1473 aa11.47□□□□□ -0.57
CDKL5-204ENST00000623364 MSH6P52701 1360 aa11.47□□□□□ -0.57
CDKL5-204ENST00000623364 FBXO31Q5XUX0 539 aaPredicted RBP11.47□□□□□ -0.57
CDKL5-204ENST00000623364 PROSER2Q86WR7 435 aaPredicted RBP11.46□□□□□ -0.57
CDKL5-204ENST00000623364 CAPN15O75808 1086 aa11.44□□□□□ -0.58
CDKL5-204ENST00000623364 MAP3K1Q13233 1512 aa11.44□□□□□ -0.58
CDKL5-204ENST00000623364 TRPC5Q9UL62 973 aaPredicted RBP11.43□□□□□ -0.58
CDKL5-204ENST00000623364 MIA2Q96PC5 1412 aa11.42□□□□□ -0.58
CDKL5-204ENST00000623364 AHDC1Q5TGY3 1603 aaPredicted RBP11.41□□□□□ -0.58
CDKL5-204ENST00000623364 ABCC3O15438 1527 aa11.4□□□□□ -0.59
CDKL5-204ENST00000623364 PZPP20742 1482 aa11.39□□□□□ -0.59
CDKL5-204ENST00000623364 SCAF11Q99590 1463 aaKnown RBP11.39□□□□□ -0.59
CDKL5-204ENST00000623364 GIGYF1O75420 1035 aaPredicted RBP11.39□□□□□ -0.59
CDKL5-204ENST00000623364 KCNA6P17658 529 aa11.39□□□□□ -0.59
CDKL5-204ENST00000623364 TIAM1Q13009 1591 aa11.39□□□□□ -0.59
CDKL5-204ENST00000623364 USP21Q9UK80 565 aa11.39□□□□□ -0.59
CDKL5-204ENST00000623364 R3HDM1Q15032 1099 aaKnown RBP11.38□□□□□ -0.59
CDKL5-204ENST00000623364 PRDM15P57071 1507 aaPredicted RBP11.36□□□□□ -0.59
CDKL5-204ENST00000623364 A2MP01023 1474 aa11.36□□□□□ -0.59
CDKL5-204ENST00000623364 PLXNC1O60486 1568 aa11.36□□□□□ -0.59
CDKL5-204ENST00000623364 DIP2AQ14689 1571 aa11.36□□□□□ -0.59
CDKL5-204ENST00000623364 PRELPP51888 382 aa11.35□□□□□ -0.59
CDKL5-204ENST00000623364 TXNDC2Q86VQ3 553 aa11.35□□□□□ -0.59
CDKL5-204ENST00000623364 PPP1R1BQ9UD71 204 aaPredicted RBP11.35□□□□□ -0.59
CDKL5-204ENST00000623364 SAMD9Q5K651 1589 aa11.35□□□□□ -0.59
CDKL5-204ENST00000623364 SPAG9O60271 1321 aaKnown RBP11.35□□□□□ -0.59
CDKL5-204ENST00000623364 BAG6P46379 1132 aa11.34□□□□□ -0.59
CDKL5-204ENST00000623364 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.34□□□□□ -0.59
CDKL5-204ENST00000623364 RTEL1-TNFRSF6BF6WH68 1400 aa11.34□□□□□ -0.59
CDKL5-204ENST00000623364 NINLQ9Y2I6 1382 aa11.33□□□□□ -0.6
CDKL5-204ENST00000623364 ADAMTS2O95450 1211 aa11.33□□□□□ -0.6
CDKL5-204ENST00000623364 LTKP29376 864 aa11.32□□□□□ -0.6
CDKL5-204ENST00000623364 EID1Q9Y6B2 187 aa11.32□□□□□ -0.6
CDKL5-204ENST00000623364 ATRNO75882 1429 aa11.32□□□□□ -0.6
CDKL5-204ENST00000623364 SAMD9LQ8IVG5 1584 aa11.32□□□□□ -0.6
CDKL5-204ENST00000623364 NKTRP30414 1462 aaKnown RBP11.32□□□□□ -0.6
CDKL5-204ENST00000623364 UNC13BO14795 1591 aa11.31□□□□□ -0.6
CDKL5-204ENST00000623364 KDM5AP29375 1690 aaKnown RBP11.3□□□□□ -0.6
CDKL5-204ENST00000623364 ADGBQ8N7X0 1667 aa11.3□□□□□ -0.6
CDKL5-204ENST00000623364 LRRC59Q96AG4 307 aaKnown RBP11.3□□□□□ -0.6
CDKL5-204ENST00000623364 CDK11AQ9UQ88 783 aaPredicted RBP11.3□□□□□ -0.6
CDKL5-204ENST00000623364 SETD5Q9C0A6 1442 aa11.29□□□□□ -0.6
CDKL5-204ENST00000623364 FNBP4Q8N3X1 1017 aaPredicted RBP11.28□□□□□ -0.6
CDKL5-204ENST00000623364 CDC42BPBQ9Y5S2 1711 aa11.28□□□□□ -0.6
CDKL5-204ENST00000623364 WASHC2CQ9Y4E1 1318 aa11.28□□□□□ -0.6
CDKL5-204ENST00000623364 CADPS2Q86UW7 1296 aa11.27□□□□□ -0.61
CDKL5-204ENST00000623364 NCOA2Q15596 1464 aa11.26□□□□□ -0.61
CDKL5-204ENST00000623364 ARHGAP23Q9P227 1491 aa11.26□□□□□ -0.61
CDKL5-204ENST00000623364 C14orf37Q86TY3 774 aa11.26□□□□□ -0.61
CDKL5-204ENST00000623364 CHD4Q14839 1912 aa11.26□□□□□ -0.61
CDKL5-204ENST00000623364 CAMTA1Q9Y6Y1 1673 aa11.26□□□□□ -0.61
CDKL5-204ENST00000623364 ATF3P18847 181 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms