RNA–Protein interactions for RNA: ENST00000622647.3

ZNF48-206, Transcript of zinc finger protein 48, humanhuman

TSL 4 BASIC

Gene ZNF48, Length 2,695 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48-206ENST00000622647 BCORL1Q5H9F3 1711 aa24.43■■□□□ 1.5
ZNF48-206ENST00000622647 NBPF1Q3BBV0 1214 aa24.42■■□□□ 1.5
ZNF48-206ENST00000622647 SENP3-EIF4A1A0A087X0R7 540 aa24.4■■□□□ 1.5
ZNF48-206ENST00000622647 PLA2R1Q13018 1463 aa24.4■■□□□ 1.5
ZNF48-206ENST00000622647 ROCK2O75116 1388 aaKnown RBP24.39■■□□□ 1.49
ZNF48-206ENST00000622647 MAST1Q9Y2H9 1570 aa24.39■■□□□ 1.49
ZNF48-206ENST00000622647 UHRF1BP1Q6BDS2 1440 aa24.38■■□□□ 1.49
ZNF48-206ENST00000622647 PELP1Q8IZL8 1130 aaKnown RBP24.38■■□□□ 1.49
ZNF48-206ENST00000622647 KDM5CP41229 1560 aa24.37■■□□□ 1.49
ZNF48-206ENST00000622647 RALGAPBQ86X10 1494 aa24.37■■□□□ 1.49
ZNF48-206ENST00000622647 ABCC1P33527 1531 aa24.35■■□□□ 1.49
ZNF48-206ENST00000622647 DUOX2Q9NRD8 1548 aa24.35■■□□□ 1.49
ZNF48-206ENST00000622647 WDR7Q9Y4E6 1490 aa24.33■■□□□ 1.49
ZNF48-206ENST00000622647 UNC13BO14795 1591 aa24.33■■□□□ 1.49
ZNF48-206ENST00000622647 PLXNC1O60486 1568 aa24.32■■□□□ 1.48
ZNF48-206ENST00000622647 NEFLP07196 543 aa24.32■■□□□ 1.48
ZNF48-206ENST00000622647 IRX6P78412 446 aaPredicted RBP24.32■■□□□ 1.48
ZNF48-206ENST00000622647 OSCARQ8IYS5 282 aa24.32■■□□□ 1.48
ZNF48-206ENST00000622647 DHX29Q7Z478 1369 aaKnown RBP24.3■■□□□ 1.48
ZNF48-206ENST00000622647 FANCAO15360 1455 aa24.29■■□□□ 1.48
ZNF48-206ENST00000622647 KIF3BO15066 747 aa24.28■■□□□ 1.48
ZNF48-206ENST00000622647 ASXL2Q76L83 1435 aa24.28■■□□□ 1.48
ZNF48-206ENST00000622647 ERBINQ96RT1 1412 aa24.28■■□□□ 1.48
ZNF48-206ENST00000622647 SCAPERQ9BY12 1400 aa24.28■■□□□ 1.48
ZNF48-206ENST00000622647 A2MP01023 1474 aa24.27■■□□□ 1.48
ZNF48-206ENST00000622647 PRAG1Q86YV5 1406 aa24.27■■□□□ 1.48
ZNF48-206ENST00000622647 POLR1AO95602 1720 aaPredicted RBP24.27■■□□□ 1.48
ZNF48-206ENST00000622647 NPM1P06748 294 aaKnown RBP eCLIP24.27■■□□□ 1.48
ZNF48-206ENST00000622647 IQGAP3Q86VI3 1631 aa24.26■■□□□ 1.47
ZNF48-206ENST00000622647 ADGRL1O94910 1474 aa24.21■■□□□ 1.47
ZNF48-206ENST00000622647 ZFYVE16Q7Z3T8 1539 aa24.2■■□□□ 1.46
ZNF48-206ENST00000622647 MAGI2Q86UL8 1455 aa24.17■■□□□ 1.46
ZNF48-206ENST00000622647 ARID4BQ4LE39 1312 aaPredicted RBP24.17■■□□□ 1.46
ZNF48-206ENST00000622647 TRPM1Q7Z4N2 1603 aa24.16■■□□□ 1.46
ZNF48-206ENST00000622647 RTEL1-TNFRSF6BF6WH68 1400 aa24.15■■□□□ 1.46
ZNF48-206ENST00000622647 TMC1Q8TDI8 760 aa24.14■■□□□ 1.46
ZNF48-206ENST00000622647 ATP7AQ04656 1500 aa24.14■■□□□ 1.45
ZNF48-206ENST00000622647 ABCA9Q8IUA7 1624 aa24.13■■□□□ 1.45
ZNF48-206ENST00000622647 E9PCH4 1651 aa24.12■■□□□ 1.45
ZNF48-206ENST00000622647 DISP3Q9P2K9 1392 aa24.11■■□□□ 1.45
ZNF48-206ENST00000622647 ARAP3Q8WWN8 1544 aa24.1■■□□□ 1.45
ZNF48-206ENST00000622647 TESK2Q96S53 571 aa24.1■■□□□ 1.45
ZNF48-206ENST00000622647 ATP10AO60312 1499 aa24.09■■□□□ 1.45
ZNF48-206ENST00000622647 KANK1Q14678 1352 aa24.09■■□□□ 1.45
ZNF48-206ENST00000622647 CC2D1BQ5T0F9 858 aaKnown RBP24.07■■□□□ 1.44
ZNF48-206ENST00000622647 GGT6Q6P531 493 aa24.07■■□□□ 1.44
ZNF48-206ENST00000622647 ZBED9Q6R2W3 1325 aa24.07■■□□□ 1.44
ZNF48-206ENST00000622647 TSHZ2Q9NRE2 1034 aa24.07■■□□□ 1.44
ZNF48-206ENST00000622647 GPRASP1Q5JY77 1395 aa24.05■■□□□ 1.44
ZNF48-206ENST00000622647 CHGAP10645 457 aaKnown RBP24.05■■□□□ 1.44
ZNF48-206ENST00000622647 CD109Q6YHK3 1445 aa24.05■■□□□ 1.44
ZNF48-206ENST00000622647 PNISRQ8TF01 805 aaKnown RBP24.05■■□□□ 1.44
ZNF48-206ENST00000622647 PANK3Q9H999 370 aa24.04■■□□□ 1.44
ZNF48-206ENST00000622647 INO80Q9ULG1 1556 aaPredicted RBP24.04■■□□□ 1.44
ZNF48-206ENST00000622647 SALL2Q9Y467 1007 aaPredicted RBP24.04■■□□□ 1.44
ZNF48-206ENST00000622647 RAPGEF3O95398 923 aa24.03■■□□□ 1.44
ZNF48-206ENST00000622647 UGGT1Q9NYU2 1555 aa24.03■■□□□ 1.44
ZNF48-206ENST00000622647 TMF1P82094 1093 aa24.01■■□□□ 1.43
ZNF48-206ENST00000622647 CLTCL1P53675 1640 aa24.01■■□□□ 1.43
ZNF48-206ENST00000622647 MYBBP1AQ9BQG0 1328 aaKnown RBP23.99■■□□□ 1.43
ZNF48-206ENST00000622647 PRDM15P57071 1507 aaPredicted RBP23.99■■□□□ 1.43
ZNF48-206ENST00000622647 CYB5RLQ6IPT4 315 aa23.99■■□□□ 1.43
ZNF48-206ENST00000622647 PER1O15534 1290 aaPredicted RBP23.98■■□□□ 1.43
ZNF48-206ENST00000622647 TRPM2O94759 1503 aa23.98■■□□□ 1.43
ZNF48-206ENST00000622647 PTPRTO14522 1441 aa23.98■■□□□ 1.43
ZNF48-206ENST00000622647 CFAP70Q5T0N1 1121 aa23.97■■□□□ 1.43
ZNF48-206ENST00000622647 SPHKAPQ2M3C7 1700 aa23.97■■□□□ 1.43
ZNF48-206ENST00000622647 RALBP1Q15311 655 aa23.97■■□□□ 1.43
ZNF48-206ENST00000622647 SENP3Q9H4L4 574 aaPredicted RBP23.97■■□□□ 1.43
ZNF48-206ENST00000622647 KIDINS220Q9ULH0 1771 aa23.96■■□□□ 1.43
ZNF48-206ENST00000622647 CFAP65Q6ZU64 1925 aaKnown RBP23.96■■□□□ 1.43
ZNF48-206ENST00000622647 DEPDC5O75140 1603 aa23.96■■□□□ 1.43
ZNF48-206ENST00000622647 COL17A1Q9UMD9 1497 aaPredicted RBP23.95■■□□□ 1.43
ZNF48-206ENST00000622647 KTN1Q86UP2 1357 aaKnown RBP23.95■■□□□ 1.42
ZNF48-206ENST00000622647 ADGRF5Q8IZF2 1346 aa23.95■■□□□ 1.42
ZNF48-206ENST00000622647 EIF2AK4Q9P2K8 1649 aaKnown RBP23.95■■□□□ 1.42
ZNF48-206ENST00000622647 TET3O43151 1660 aa23.94■■□□□ 1.42
ZNF48-206ENST00000622647 ZNF518AQ6AHZ1 1483 aa23.94■■□□□ 1.42
ZNF48-206ENST00000622647 MROH1Q8NDA8 1641 aa23.92■■□□□ 1.42
ZNF48-206ENST00000622647 MADDQ8WXG6 1647 aa23.91■■□□□ 1.42
ZNF48-206ENST00000622647 NUTM2DQ5VT03 806 aaPredicted RBP23.9■■□□□ 1.42
ZNF48-206ENST00000622647 VWDEQ8N2E2 1590 aa23.89■■□□□ 1.42
ZNF48-206ENST00000622647 CEP152O94986 1710 aa23.89■■□□□ 1.41
ZNF48-206ENST00000622647 BRD4O60885 1362 aaPredicted RBP23.88■■□□□ 1.41
ZNF48-206ENST00000622647 NLRP13Q86W25 1043 aa23.88■■□□□ 1.41
ZNF48-206ENST00000622647 POGZQ7Z3K3 1410 aa23.88■■□□□ 1.41
ZNF48-206ENST00000622647 WASHC2CQ9Y4E1 1318 aa23.88■■□□□ 1.41
ZNF48-206ENST00000622647 PARD3Q8TEW0 1356 aa23.87■■□□□ 1.41
ZNF48-206ENST00000622647 LAMC1P11047 1609 aa23.86■■□□□ 1.41
ZNF48-206ENST00000622647 B4GALNT3Q6L9W6 998 aa23.84■■□□□ 1.41
ZNF48-206ENST00000622647 RNF17Q9BXT8 1623 aaKnown RBP23.84■■□□□ 1.41
ZNF48-206ENST00000622647 NUDCQ9Y266 331 aa23.84■■□□□ 1.41
ZNF48-206ENST00000622647 PPRC1Q5VV67 1664 aaKnown RBP23.83■■□□□ 1.41
ZNF48-206ENST00000622647 SCAF11Q99590 1463 aaKnown RBP23.82■■□□□ 1.4
ZNF48-206ENST00000622647 KNSTRNQ9Y448 316 aa23.82■■□□□ 1.4
ZNF48-206ENST00000622647 EFCAB6Q5THR3 1501 aa23.81■■□□□ 1.4
ZNF48-206ENST00000622647 LRPPRCP42704 1394 aaKnown RBP23.81■■□□□ 1.4
ZNF48-206ENST00000622647 TMEM132EQ6IEE7 984 aa23.79■■□□□ 1.4
ZNF48-206ENST00000622647 FRMPD1Q5SYB0 1578 aa23.79■■□□□ 1.4
ZNF48-206ENST00000622647 NPATQ14207 1427 aa23.79■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms