RNA–Protein interactions for RNA: ENST00000622233.1

RAB28P4-201, Transcript of RAB28, member RAS oncogene family pseudogene 4, humanhuman

BASIC

Gene RAB28P4, Length 665 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28P4-201ENST00000622233 ZNF454Q8N9F8 522 aa12.7□□□□□ -0.38
RAB28P4-201ENST00000622233 JPH4Q96JJ6 628 aa12.7□□□□□ -0.38
RAB28P4-201ENST00000622233 LHX6Q9UPM6 363 aa12.7□□□□□ -0.38
RAB28P4-201ENST00000622233 MAP3K7O43318 606 aa12.69□□□□□ -0.38
RAB28P4-201ENST00000622233 TYW1BQ6NUM6 668 aa12.69□□□□□ -0.38
RAB28P4-201ENST00000622233 KRI1Q8N9T8 703 aaKnown RBP12.69□□□□□ -0.38
RAB28P4-201ENST00000622233 EPAS1Q99814 870 aa12.69□□□□□ -0.38
RAB28P4-201ENST00000622233 PEG3Q9GZU2 1588 aa12.69□□□□□ -0.38
RAB28P4-201ENST00000622233 PTGDRQ13258 359 aa12.67□□□□□ -0.38
RAB28P4-201ENST00000622233 SMARCA2P51531 1590 aa12.67□□□□□ -0.38
RAB28P4-201ENST00000622233 ATAD2BQ9ULI0 1458 aa12.66□□□□□ -0.38
RAB28P4-201ENST00000622233 MROH2BQ7Z745 1585 aa12.66□□□□□ -0.38
RAB28P4-201ENST00000622233 NCAPD3P42695 1498 aa12.65□□□□□ -0.38
RAB28P4-201ENST00000622233 SNPHO15079 494 aa12.65□□□□□ -0.38
RAB28P4-201ENST00000622233 FCHSD2O94868 740 aa12.65□□□□□ -0.38
RAB28P4-201ENST00000622233 NPDC1Q9NQX5 325 aaPredicted RBP12.65□□□□□ -0.38
RAB28P4-201ENST00000622233 HMGXB3Q12766 1538 aa12.65□□□□□ -0.38
RAB28P4-201ENST00000622233 GNPATO15228 680 aa12.64□□□□□ -0.39
RAB28P4-201ENST00000622233 HOXB1P14653 301 aaPredicted RBP12.64□□□□□ -0.39
RAB28P4-201ENST00000622233 ADAM33Q9BZ11 813 aa12.64□□□□□ -0.39
RAB28P4-201ENST00000622233 BRPF1P55201 1214 aaPredicted RBP12.63□□□□□ -0.39
RAB28P4-201ENST00000622233 ZDHHC16Q969W1 377 aa12.63□□□□□ -0.39
RAB28P4-201ENST00000622233 HIC1Q14526 733 aa12.62□□□□□ -0.39
RAB28P4-201ENST00000622233 FBXW7Q969H0 707 aa12.62□□□□□ -0.39
RAB28P4-201ENST00000622233 C6orf132Q5T0Z8 1188 aa12.61□□□□□ -0.39
RAB28P4-201ENST00000622233 AK7Q96M32 723 aa12.61□□□□□ -0.39
RAB28P4-201ENST00000622233 MAP2K5Q13163 448 aa12.58□□□□□ -0.4
RAB28P4-201ENST00000622233 NEUROD2Q15784 382 aa12.58□□□□□ -0.4
RAB28P4-201ENST00000622233 CCDC102AQ96A19 550 aa12.58□□□□□ -0.4
RAB28P4-201ENST00000622233 TRIM66O15016 1216 aa12.57□□□□□ -0.4
RAB28P4-201ENST00000622233 IRF6O14896 467 aa12.56□□□□□ -0.4
RAB28P4-201ENST00000622233 MINK1Q8N4C8 1332 aaPredicted RBP12.56□□□□□ -0.4
RAB28P4-201ENST00000622233 WIZO95785 1651 aa12.55□□□□□ -0.4
RAB28P4-201ENST00000622233 BAZ1BQ9UIG0 1483 aaKnown RBP12.55□□□□□ -0.4
RAB28P4-201ENST00000622233 PPP4R3BQ5MIZ7 849 aa12.55□□□□□ -0.4
RAB28P4-201ENST00000622233 GPBP1L1Q9HC44 474 aaPredicted RBP12.54□□□□□ -0.4
RAB28P4-201ENST00000622233 ST18O60284 1047 aa12.53□□□□□ -0.4
RAB28P4-201ENST00000622233 COL9A1P20849 921 aa12.53□□□□□ -0.4
RAB28P4-201ENST00000622233 FAM161AQ3B820 660 aa12.53□□□□□ -0.4
RAB28P4-201ENST00000622233 PDE4DQ08499 809 aa12.51□□□□□ -0.41
RAB28P4-201ENST00000622233 PADI6Q6TGC4 694 aa12.51□□□□□ -0.41
RAB28P4-201ENST00000622233 MARVELD3Q96A59 401 aa12.51□□□□□ -0.41
RAB28P4-201ENST00000622233 BCL2L12Q9HB09 334 aa12.5□□□□□ -0.41
RAB28P4-201ENST00000622233 RSF1Q96T23 1441 aaPredicted RBP12.49□□□□□ -0.41
RAB28P4-201ENST00000622233 FAM163AQ96GL9 167 aaPredicted RBP12.48□□□□□ -0.41
RAB28P4-201ENST00000622233 PSDA5PKW4 1024 aaPredicted RBP12.47□□□□□ -0.41
RAB28P4-201ENST00000622233 FAM198AQ9UFP1 575 aa12.47□□□□□ -0.41
RAB28P4-201ENST00000622233 VARS2Q5ST30 1063 aaKnown RBP12.46□□□□□ -0.41
RAB28P4-201ENST00000622233 PHOX2BQ99453 314 aa12.46□□□□□ -0.41
RAB28P4-201ENST00000622233 ERBB3P21860 1342 aa12.45□□□□□ -0.42
RAB28P4-201ENST00000622233 PTPREP23469 700 aa12.45□□□□□ -0.42
RAB28P4-201ENST00000622233 CDCA7LQ96GN5 454 aa12.45□□□□□ -0.42
RAB28P4-201ENST00000622233 PRSS12P56730 875 aa12.44□□□□□ -0.42
RAB28P4-201ENST00000622233 CERKQ8TCT0 537 aa12.44□□□□□ -0.42
RAB28P4-201ENST00000622233 NLRP7Q8WX94 980 aa12.44□□□□□ -0.42
RAB28P4-201ENST00000622233 KCNK17Q96T54 332 aa12.44□□□□□ -0.42
RAB28P4-201ENST00000622233 KDM4CQ9H3R0 1056 aa12.44□□□□□ -0.42
RAB28P4-201ENST00000622233 EMP3P54852 163 aa12.43□□□□□ -0.42
RAB28P4-201ENST00000622233 POTEEQ6S8J3 1075 aa12.43□□□□□ -0.42
RAB28P4-201ENST00000622233 TTC13Q8NBP0 860 aa12.43□□□□□ -0.42
RAB28P4-201ENST00000622233 LCE2DQ5TA82 110 aaPredicted RBP12.42□□□□□ -0.42
RAB28P4-201ENST00000622233 ADGRG1Q9Y653 693 aa12.42□□□□□ -0.42
RAB28P4-201ENST00000622233 TOP2AP11388 1531 aaKnown RBP12.42□□□□□ -0.42
RAB28P4-201ENST00000622233 FAM205CA6NFA0 338 aa12.41□□□□□ -0.42
RAB28P4-201ENST00000622233 PPP1R3GB7ZBB8 358 aa12.41□□□□□ -0.42
RAB28P4-201ENST00000622233 C3orf80F5H4A9 247 aa12.41□□□□□ -0.42
RAB28P4-201ENST00000622233 PSEN2P49810 448 aa12.41□□□□□ -0.42
RAB28P4-201ENST00000622233 AMHR2Q16671 573 aa12.41□□□□□ -0.42
RAB28P4-201ENST00000622233 PARP9Q8IXQ6 854 aa12.41□□□□□ -0.42
RAB28P4-201ENST00000622233 REPIN1Q9BWE0 567 aaKnown RBP12.41□□□□□ -0.42
RAB28P4-201ENST00000622233 TSKSQ9UJT2 592 aa12.41□□□□□ -0.42
RAB28P4-201ENST00000622233 POTEB3A0JP26 581 aa12.4□□□□□ -0.42
RAB28P4-201ENST00000622233 PROX2Q3B8N5 592 aa12.4□□□□□ -0.42
RAB28P4-201ENST00000622233 POTEBQ6S5H4 581 aa12.4□□□□□ -0.42
RAB28P4-201ENST00000622233 AXIN2Q9Y2T1 843 aa12.4□□□□□ -0.42
RAB28P4-201ENST00000622233 TTLL12Q14166 644 aaPredicted RBP12.38□□□□□ -0.43
RAB28P4-201ENST00000622233 TMEM132AQ24JP5 1023 aa12.38□□□□□ -0.43
RAB28P4-201ENST00000622233 METTL3Q86U44 580 aaKnown RBP12.38□□□□□ -0.43
RAB28P4-201ENST00000622233 RBM27Q9P2N5 1060 aaKnown RBP12.38□□□□□ -0.43
RAB28P4-201ENST00000622233 MDM2Q00987 491 aaPredicted RBP12.36□□□□□ -0.43
RAB28P4-201ENST00000622233 IL27Q8NEV9 243 aa12.36□□□□□ -0.43
RAB28P4-201ENST00000622233 LAMC3Q9Y6N6 1575 aa12.35□□□□□ -0.43
RAB28P4-201ENST00000622233 DMRTA1Q5VZB9 504 aa12.35□□□□□ -0.43
RAB28P4-201ENST00000622233 PXYLP1Q8TE99 480 aa12.35□□□□□ -0.43
RAB28P4-201ENST00000622233 NESP48681 1621 aa12.34□□□□□ -0.43
RAB28P4-201ENST00000622233 TRIM6-TRIM34B2RNG4 842 aa12.34□□□□□ -0.43
RAB28P4-201ENST00000622233 FAM117AQ9C073 453 aa12.34□□□□□ -0.43
RAB28P4-201ENST00000622233 SMAPO00193 183 aa12.33□□□□□ -0.44
RAB28P4-201ENST00000622233 OATP04181 439 aa12.33□□□□□ -0.44
RAB28P4-201ENST00000622233 HS3ST6Q96QI5 342 aa12.33□□□□□ -0.44
RAB28P4-201ENST00000622233 GIGYF2Q6Y7W6 1299 aaKnown RBP12.32□□□□□ -0.44
RAB28P4-201ENST00000622233 NUDT18Q6ZVK8 323 aa12.32□□□□□ -0.44
RAB28P4-201ENST00000622233 ZBED2Q9BTP6 218 aa12.32□□□□□ -0.44
RAB28P4-201ENST00000622233 ARHGAP33O14559 1287 aa12.31□□□□□ -0.44
RAB28P4-201ENST00000622233 MS4A1P11836 297 aa12.31□□□□□ -0.44
RAB28P4-201ENST00000622233 EYA1Q99502 592 aa12.3□□□□□ -0.44
RAB28P4-201ENST00000622233 TMUB1Q9BVT8 246 aa12.3□□□□□ -0.44
RAB28P4-201ENST00000622233 PNMA3Q9UL41 463 aa12.3□□□□□ -0.44
RAB28P4-201ENST00000622233 ZNF687Q8N1G0 1237 aa12.29□□□□□ -0.44
RAB28P4-201ENST00000622233 RBM46Q8TBY0 533 aaKnown RBP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms