RNA–Protein interactions for RNA: ENST00000621626.1

CCL4-203, Transcript of C-C motif chemokine ligand 4, humanhuman

TSL 1 (best) BASIC

Gene CCL4, Length 552 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4-203ENST00000621626 PTGDRQ13258 359 aa11.19□□□□□ -0.62
CCL4-203ENST00000621626 C6orf132Q5T0Z8 1188 aa11.19□□□□□ -0.62
CCL4-203ENST00000621626 FAM163AQ96GL9 167 aaPredicted RBP11.19□□□□□ -0.62
CCL4-203ENST00000621626 ADAM33Q9BZ11 813 aa11.19□□□□□ -0.62
CCL4-203ENST00000621626 CDHR5Q9HBB8 845 aa11.19□□□□□ -0.62
CCL4-203ENST00000621626 ERBB3P21860 1342 aa11.17□□□□□ -0.62
CCL4-203ENST00000621626 EMP3P54852 163 aa11.16□□□□□ -0.62
CCL4-203ENST00000621626 CERKQ8TCT0 537 aa11.16□□□□□ -0.62
CCL4-203ENST00000621626 BCL2L12Q9HB09 334 aa11.15□□□□□ -0.62
CCL4-203ENST00000621626 PTPREP23469 700 aa11.14□□□□□ -0.63
CCL4-203ENST00000621626 KCNH8Q96L42 1107 aa11.14□□□□□ -0.63
CCL4-203ENST00000621626 AK7Q96M32 723 aa11.14□□□□□ -0.63
CCL4-203ENST00000621626 MAP2K5Q13163 448 aa11.13□□□□□ -0.63
CCL4-203ENST00000621626 VARS2Q5ST30 1063 aaKnown RBP11.13□□□□□ -0.63
CCL4-203ENST00000621626 MARVELD3Q96A59 401 aa11.13□□□□□ -0.63
CCL4-203ENST00000621626 NPDC1Q9NQX5 325 aaPredicted RBP11.13□□□□□ -0.63
CCL4-203ENST00000621626 MINK1Q8N4C8 1332 aaPredicted RBP11.12□□□□□ -0.63
CCL4-203ENST00000621626 FECHP22830 423 aa11.1□□□□□ -0.63
CCL4-203ENST00000621626 FAM205CA6NFA0 338 aa11.08□□□□□ -0.64
CCL4-203ENST00000621626 PPP1R3GB7ZBB8 358 aa11.08□□□□□ -0.64
CCL4-203ENST00000621626 IRF6O14896 467 aa11.08□□□□□ -0.64
CCL4-203ENST00000621626 KCNK17Q96T54 332 aa11.08□□□□□ -0.64
CCL4-203ENST00000621626 CCDC102AQ96A19 550 aa11.07□□□□□ -0.64
CCL4-203ENST00000621626 PRSS12P56730 875 aa11.06□□□□□ -0.64
CCL4-203ENST00000621626 PADI6Q6TGC4 694 aa11.06□□□□□ -0.64
CCL4-203ENST00000621626 RBM27Q9P2N5 1060 aaKnown RBP11.06□□□□□ -0.64
CCL4-203ENST00000621626 COL9A1P20849 921 aa11.05□□□□□ -0.64
CCL4-203ENST00000621626 CDCA7LQ96GN5 454 aa11.05□□□□□ -0.64
CCL4-203ENST00000621626 ARHGAP33O14559 1287 aa11.03□□□□□ -0.64
CCL4-203ENST00000621626 TRIM66O15016 1216 aa11.03□□□□□ -0.64
CCL4-203ENST00000621626 NEUROD2Q15784 382 aa11.03□□□□□ -0.64
CCL4-203ENST00000621626 PBX2P40425 430 aa11.02□□□□□ -0.65
CCL4-203ENST00000621626 ZNF687Q8N1G0 1237 aa11.02□□□□□ -0.65
CCL4-203ENST00000621626 HS3ST6Q96QI5 342 aa11.02□□□□□ -0.65
CCL4-203ENST00000621626 OATP04181 439 aa11□□□□□ -0.65
CCL4-203ENST00000621626 PSEN2P49810 448 aa11□□□□□ -0.65
CCL4-203ENST00000621626 CCDC180Q9P1Z9 1646 aa10.99□□□□□ -0.65
CCL4-203ENST00000621626 BRPF1P55201 1214 aaPredicted RBP10.99□□□□□ -0.65
CCL4-203ENST00000621626 PDE4DQ08499 809 aa10.99□□□□□ -0.65
CCL4-203ENST00000621626 PACS2Q86VP3 889 aa10.99□□□□□ -0.65
CCL4-203ENST00000621626 TTC13Q8NBP0 860 aa10.99□□□□□ -0.65
CCL4-203ENST00000621626 TRIM6-TRIM34B2RNG4 842 aa10.98□□□□□ -0.65
CCL4-203ENST00000621626 LCE2DQ5TA82 110 aaPredicted RBP10.98□□□□□ -0.65
CCL4-203ENST00000621626 AXIN2Q9Y2T1 843 aa10.98□□□□□ -0.65
CCL4-203ENST00000621626 FAM161AQ3B820 660 aa10.97□□□□□ -0.65
CCL4-203ENST00000621626 RBM46Q8TBY0 533 aaKnown RBP10.97□□□□□ -0.65
CCL4-203ENST00000621626 ADGRG1Q9Y653 693 aa10.97□□□□□ -0.65
CCL4-203ENST00000621626 NBPF26B4DH59 902 aa10.96□□□□□ -0.65
CCL4-203ENST00000621626 PROX2Q3B8N5 592 aa10.96□□□□□ -0.65
CCL4-203ENST00000621626 TSKSQ9UJT2 592 aa10.96□□□□□ -0.65
CCL4-203ENST00000621626 ONECUT3O60422 494 aaPredicted RBP10.95□□□□□ -0.66
CCL4-203ENST00000621626 TTLL12Q14166 644 aaPredicted RBP10.95□□□□□ -0.66
CCL4-203ENST00000621626 AMHR2Q16671 573 aa10.95□□□□□ -0.66
CCL4-203ENST00000621626 ZBED2Q9BTP6 218 aa10.95□□□□□ -0.66
CCL4-203ENST00000621626 POTEEQ6S8J3 1075 aa10.94□□□□□ -0.66
CCL4-203ENST00000621626 METTL3Q86U44 580 aaKnown RBP10.94□□□□□ -0.66
CCL4-203ENST00000621626 POTEB3A0JP26 581 aa10.93□□□□□ -0.66
CCL4-203ENST00000621626 DMRTA1Q5VZB9 504 aa10.93□□□□□ -0.66
CCL4-203ENST00000621626 POTEBQ6S5H4 581 aa10.93□□□□□ -0.66
CCL4-203ENST00000621626 NUDT18Q6ZVK8 323 aa10.93□□□□□ -0.66
CCL4-203ENST00000621626 FAM198AQ9UFP1 575 aa10.93□□□□□ -0.66
CCL4-203ENST00000621626 PNMA3Q9UL41 463 aa10.93□□□□□ -0.66
CCL4-203ENST00000621626 TMEM132AQ24JP5 1023 aa10.92□□□□□ -0.66
CCL4-203ENST00000621626 PXYLP1Q8TE99 480 aa10.92□□□□□ -0.66
CCL4-203ENST00000621626 TATDN2Q93075 761 aa10.92□□□□□ -0.66
CCL4-203ENST00000621626 SLC4A5Q9BY07 1137 aa10.92□□□□□ -0.66
CCL4-203ENST00000621626 KIAA1468Q9P260 1216 aa10.92□□□□□ -0.66
CCL4-203ENST00000621626 GPBP1L1Q9HC44 474 aaPredicted RBP10.91□□□□□ -0.66
CCL4-203ENST00000621626 CLCN1P35523 988 aa10.9□□□□□ -0.66
CCL4-203ENST00000621626 KDM4CQ9H3R0 1056 aa10.9□□□□□ -0.66
CCL4-203ENST00000621626 MDM2Q00987 491 aaPredicted RBP10.89□□□□□ -0.67
CCL4-203ENST00000621626 PARP9Q8IXQ6 854 aa10.89□□□□□ -0.67
CCL4-203ENST00000621626 RABGEF1Q9UJ41 708 aa10.89□□□□□ -0.67
CCL4-203ENST00000621626 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.88□□□□□ -0.67
CCL4-203ENST00000621626 PHOX2BQ99453 314 aa10.88□□□□□ -0.67
CCL4-203ENST00000621626 EYA1Q99502 592 aa10.88□□□□□ -0.67
CCL4-203ENST00000621626 GPCPD1Q9NPB8 672 aa10.88□□□□□ -0.67
CCL4-203ENST00000621626 VPS9D1Q9Y2B5 631 aa10.88□□□□□ -0.67
CCL4-203ENST00000621626 DAXXQ9UER7 740 aaPredicted RBP10.87□□□□□ -0.67
CCL4-203ENST00000621626 RCCD1A6NED2 376 aa10.86□□□□□ -0.67
CCL4-203ENST00000621626 TK2O00142 265 aa10.86□□□□□ -0.67
CCL4-203ENST00000621626 SMAPO00193 183 aa10.86□□□□□ -0.67
CCL4-203ENST00000621626 LSM11P83369 360 aaKnown RBP eCLIP10.86□□□□□ -0.67
CCL4-203ENST00000621626 GIGYF2Q6Y7W6 1299 aaKnown RBP10.86□□□□□ -0.67
CCL4-203ENST00000621626 NBPF3Q9H094 633 aa10.86□□□□□ -0.67
CCL4-203ENST00000621626 DNAJB2P25686 324 aa10.85□□□□□ -0.67
CCL4-203ENST00000621626 NLRP7Q8WX94 980 aa10.85□□□□□ -0.67
CCL4-203ENST00000621626 C3orf80F5H4A9 247 aa10.84□□□□□ -0.67
CCL4-203ENST00000621626 ANKRD13DQ6ZTN6 518 aa10.83□□□□□ -0.68
CCL4-203ENST00000621626 STAC3Q96MF2 364 aa10.83□□□□□ -0.68
CCL4-203ENST00000621626 SEPT9Q9UHD8 586 aaPredicted RBP10.83□□□□□ -0.68
CCL4-203ENST00000621626 ADGRD1Q6QNK2 874 aa10.82□□□□□ -0.68
CCL4-203ENST00000621626 HDGFP51858 240 aaKnown RBP10.81□□□□□ -0.68
CCL4-203ENST00000621626 DDRGK1Q96HY6 314 aa10.81□□□□□ -0.68
CCL4-203ENST00000621626 TMUB1Q9BVT8 246 aa10.81□□□□□ -0.68
CCL4-203ENST00000621626 REPIN1Q9BWE0 567 aaKnown RBP10.81□□□□□ -0.68
CCL4-203ENST00000621626 SSTR3P32745 418 aaPredicted RBP10.8□□□□□ -0.68
CCL4-203ENST00000621626 FAM98CQ17RN3 349 aaKnown RBP10.8□□□□□ -0.68
CCL4-203ENST00000621626 LAPTM4BQ86VI4 370 aa10.8□□□□□ -0.68
CCL4-203ENST00000621626 MRPL50Q8N5N7 158 aaKnown RBP10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms