RNA–Protein interactions for RNA: ENST00000621323.4

PDE4D-227, Transcript of phosphodiesterase 4D, humanhuman

TSL 3

Gene PDE4D, Length 709 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-227ENST00000621323 FAM9AQ8IZU1 332 aaPredicted RBP11.01□□□□□ -0.65
PDE4D-227ENST00000621323 CEP170BQ9Y4F5 1589 aaPredicted RBP11.01□□□□□ -0.65
PDE4D-227ENST00000621323 MLH3Q9UHC1 1453 aa11□□□□□ -0.65
PDE4D-227ENST00000621323 MROH2AA6NES4 1674 aa10.99□□□□□ -0.65
PDE4D-227ENST00000621323 NEURL4Q96JN8 1562 aa10.99□□□□□ -0.65
PDE4D-227ENST00000621323 REM2Q8IYK8 340 aaPredicted RBP10.98□□□□□ -0.65
PDE4D-227ENST00000621323 SHANK2Q9UPX8 1470 aa10.98□□□□□ -0.65
PDE4D-227ENST00000621323 MKRN4PQ13434 485 aaPredicted RBP10.97□□□□□ -0.65
PDE4D-227ENST00000621323 EFCAB2Q5VUJ9 269 aa10.97□□□□□ -0.65
PDE4D-227ENST00000621323 POTEAQ6S8J7 498 aa10.97□□□□□ -0.65
PDE4D-227ENST00000621323 ZMYM3Q14202 1370 aa10.97□□□□□ -0.65
PDE4D-227ENST00000621323 PTPRKQ15262 1439 aa10.97□□□□□ -0.65
PDE4D-227ENST00000621323 VWDEQ8N2E2 1590 aa10.97□□□□□ -0.65
PDE4D-227ENST00000621323 SETD1AO15047 1707 aaKnown RBP10.96□□□□□ -0.65
PDE4D-227ENST00000621323 MYO5CQ9NQX4 1742 aa10.96□□□□□ -0.65
PDE4D-227ENST00000621323 LHX8Q68G74 356 aa10.96□□□□□ -0.65
PDE4D-227ENST00000621323 ESF1Q9H501 851 aaKnown RBP10.96□□□□□ -0.65
PDE4D-227ENST00000621323 KIF14Q15058 1648 aa10.95□□□□□ -0.66
PDE4D-227ENST00000621323 ARHGAP5Q13017 1502 aa10.94□□□□□ -0.66
PDE4D-227ENST00000621323 FXR2P51116 673 aaKnown RBP eCLIP10.93□□□□□ -0.66
PDE4D-227ENST00000621323 ZBTB12Q9Y330 459 aaPredicted RBP10.93□□□□□ -0.66
PDE4D-227ENST00000621323 KIDINS220Q9ULH0 1771 aa10.93□□□□□ -0.66
PDE4D-227ENST00000621323 ABCC1P33527 1531 aa10.92□□□□□ -0.66
PDE4D-227ENST00000621323 A2ML1A8K2U0 1454 aa10.92□□□□□ -0.66
PDE4D-227ENST00000621323 SUPT6HQ7KZ85 1726 aaKnown RBP10.92□□□□□ -0.66
PDE4D-227ENST00000621323 DNMT1P26358 1616 aaKnown RBP10.91□□□□□ -0.66
PDE4D-227ENST00000621323 CLTCQ00610 1675 aaKnown RBP10.9□□□□□ -0.66
PDE4D-227ENST00000621323 PITPNM1O00562 1244 aa10.9□□□□□ -0.66
PDE4D-227ENST00000621323 MYT1LQ9UL68 1186 aa10.9□□□□□ -0.66
PDE4D-227ENST00000621323 POLR1AO95602 1720 aaPredicted RBP10.89□□□□□ -0.67
PDE4D-227ENST00000621323 RNF17Q9BXT8 1623 aaKnown RBP10.89□□□□□ -0.67
PDE4D-227ENST00000621323 ITSN2Q9NZM3 1697 aa10.88□□□□□ -0.67
PDE4D-227ENST00000621323 LRRC7Q96NW7 1537 aa10.88□□□□□ -0.67
PDE4D-227ENST00000621323 PLXNC1O60486 1568 aa10.87□□□□□ -0.67
PDE4D-227ENST00000621323 RANGAP1P46060 587 aaPredicted RBP10.87□□□□□ -0.67
PDE4D-227ENST00000621323 VASPP50552 380 aaPredicted RBP10.87□□□□□ -0.67
PDE4D-227ENST00000621323 STRCP1A6NGW2 1772 aa10.87□□□□□ -0.67
PDE4D-227ENST00000621323 CDC42BPBQ9Y5S2 1711 aa10.86□□□□□ -0.67
PDE4D-227ENST00000621323 TROQ12816 1431 aaPredicted RBP10.85□□□□□ -0.67
PDE4D-227ENST00000621323 MED14O60244 1454 aa10.85□□□□□ -0.67
PDE4D-227ENST00000621323 SAMD9LQ8IVG5 1584 aa10.85□□□□□ -0.67
PDE4D-227ENST00000621323 UPF1Q92900 1129 aaKnown RBP eCLIP10.84□□□□□ -0.67
PDE4D-227ENST00000621323 SYNMO15061 1565 aa10.84□□□□□ -0.67
PDE4D-227ENST00000621323 PREX2Q70Z35 1606 aa10.84□□□□□ -0.67
PDE4D-227ENST00000621323 NPHP4O75161 1426 aaPredicted RBP10.83□□□□□ -0.68
PDE4D-227ENST00000621323 DEPDC5O75140 1603 aa10.81□□□□□ -0.68
PDE4D-227ENST00000621323 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.81□□□□□ -0.68
PDE4D-227ENST00000621323 TNRQ92752 1358 aa10.79□□□□□ -0.68
PDE4D-227ENST00000621323 INO80Q9ULG1 1556 aaPredicted RBP10.79□□□□□ -0.68
PDE4D-227ENST00000621323 A2MP01023 1474 aa10.79□□□□□ -0.68
PDE4D-227ENST00000621323 IQGAP1P46940 1657 aa10.79□□□□□ -0.68
PDE4D-227ENST00000621323 SYCP2Q9BX26 1530 aa10.79□□□□□ -0.68
PDE4D-227ENST00000621323 ATP7AQ04656 1500 aa10.78□□□□□ -0.68
PDE4D-227ENST00000621323 CLIP1P30622 1438 aa10.77□□□□□ -0.68
PDE4D-227ENST00000621323 FAM135BQ49AJ0 1406 aa10.77□□□□□ -0.68
PDE4D-227ENST00000621323 FBXO31Q5XUX0 539 aaPredicted RBP10.77□□□□□ -0.69
PDE4D-227ENST00000621323 ANKLE2Q86XL3 938 aa10.77□□□□□ -0.69
PDE4D-227ENST00000621323 PROM2Q8N271 834 aa10.77□□□□□ -0.69
PDE4D-227ENST00000621323 GGT6Q6P531 493 aa10.76□□□□□ -0.69
PDE4D-227ENST00000621323 LRRIQ1Q96JM4 1722 aa10.75□□□□□ -0.69
PDE4D-227ENST00000621323 PZPP20742 1482 aa10.75□□□□□ -0.69
PDE4D-227ENST00000621323 XIRP1Q702N8 1843 aaKnown RBP10.75□□□□□ -0.69
PDE4D-227ENST00000621323 CDK11AQ9UQ88 783 aaPredicted RBP10.75□□□□□ -0.69
PDE4D-227ENST00000621323 SPAG9O60271 1321 aaKnown RBP10.75□□□□□ -0.69
PDE4D-227ENST00000621323 UGGT1Q9NYU2 1555 aa10.74□□□□□ -0.69
PDE4D-227ENST00000621323 ZC3H13Q5T200 1668 aaKnown RBP10.74□□□□□ -0.69
PDE4D-227ENST00000621323 CDC42BPAQ5VT25 1732 aa10.73□□□□□ -0.69
PDE4D-227ENST00000621323 KLHL34Q8N239 644 aa10.73□□□□□ -0.69
PDE4D-227ENST00000621323 NLRP1Q9C000 1473 aa10.73□□□□□ -0.69
PDE4D-227ENST00000621323 GABBR2O75899 941 aa10.72□□□□□ -0.69
PDE4D-227ENST00000621323 ZNF692Q9BU19 519 aaPredicted RBP10.72□□□□□ -0.69
PDE4D-227ENST00000621323 ATP1B4Q9UN42 357 aaPredicted RBP10.72□□□□□ -0.69
PDE4D-227ENST00000621323 FMN1Q68DA7 1419 aa10.72□□□□□ -0.69
PDE4D-227ENST00000621323 FAM135AQ9P2D6 1515 aa10.72□□□□□ -0.69
PDE4D-227ENST00000621323 LRP6O75581 1613 aa10.72□□□□□ -0.69
PDE4D-227ENST00000621323 ROBO1Q9Y6N7 1651 aa10.72□□□□□ -0.69
PDE4D-227ENST00000621323 MIA2Q96PC5 1412 aa10.71□□□□□ -0.69
PDE4D-227ENST00000621323 ARHGAP35Q9NRY4 1499 aa10.7□□□□□ -0.7
PDE4D-227ENST00000621323 HNRNPMP52272 730 aaKnown RBP eCLIP10.7□□□□□ -0.7
PDE4D-227ENST00000621323 THEMISQ8N1K5 641 aaPredicted RBP10.7□□□□□ -0.7
PDE4D-227ENST00000621323 TRIM52Q96A61 297 aa10.7□□□□□ -0.7
PDE4D-227ENST00000621323 KDM5DQ9BY66 1539 aa10.69□□□□□ -0.7
PDE4D-227ENST00000621323 MAP3K1Q13233 1512 aa10.68□□□□□ -0.7
PDE4D-227ENST00000621323 KIAA1107Q9UPP5 1409 aa10.68□□□□□ -0.7
PDE4D-227ENST00000621323 IFNLR1Q8IU57 520 aaPredicted RBP10.68□□□□□ -0.7
PDE4D-227ENST00000621323 ADGBQ8N7X0 1667 aa10.67□□□□□ -0.7
PDE4D-227ENST00000621323 GPATCH8Q9UKJ3 1502 aaKnown RBP10.67□□□□□ -0.7
PDE4D-227ENST00000621323 JCADQ9P266 1359 aa10.66□□□□□ -0.7
PDE4D-227ENST00000621323 ZNF777Q9ULD5 760 aaPredicted RBP10.66□□□□□ -0.7
PDE4D-227ENST00000621323 CDK12Q9NYV4 1490 aaPredicted RBP10.66□□□□□ -0.7
PDE4D-227ENST00000621323 TMEM94Q12767 1356 aa10.65□□□□□ -0.7
PDE4D-227ENST00000621323 SCAF11Q99590 1463 aaKnown RBP10.65□□□□□ -0.7
PDE4D-227ENST00000621323 COL16A1Q07092 1604 aaPredicted RBP10.65□□□□□ -0.7
PDE4D-227ENST00000621323 PLCD3Q8N3E9 789 aa10.64□□□□□ -0.71
PDE4D-227ENST00000621323 SETBP1Q9Y6X0 1596 aa10.64□□□□□ -0.71
PDE4D-227ENST00000621323 DHX29Q7Z478 1369 aaKnown RBP10.64□□□□□ -0.71
PDE4D-227ENST00000621323 NCOA2Q15596 1464 aa10.63□□□□□ -0.71
PDE4D-227ENST00000621323 LRRC9Q6ZRR7 1453 aa10.63□□□□□ -0.71
PDE4D-227ENST00000621323 EP400Q96L91 3159 aa10.63□□□□□ -0.71
PDE4D-227ENST00000621323 PLEKHH2Q8IVE3 1493 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms