RNA–Protein interactions for RNA: ENST00000620581.4

GRIA3-208, Transcript of glutamate ionotropic receptor AMPA type subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GRIA3, Length 2,991 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA3-208ENST00000620581 KDM5AP29375 1690 aaKnown RBP20.3■□□□□ 0.84
GRIA3-208ENST00000620581 ARHGAP31Q2M1Z3 1444 aa20.29■□□□□ 0.84
GRIA3-208ENST00000620581 ADAMTSL3P82987 1691 aa20.28■□□□□ 0.84
GRIA3-208ENST00000620581 CAMSAP1Q5T5Y3 1602 aa20.28■□□□□ 0.84
GRIA3-208ENST00000620581 HNRNPMP52272 730 aaKnown RBP eCLIP20.28■□□□□ 0.84
GRIA3-208ENST00000620581 EFCAB6Q5THR3 1501 aa20.26■□□□□ 0.83
GRIA3-208ENST00000620581 CLSPNQ9HAW4 1339 aa20.26■□□□□ 0.83
GRIA3-208ENST00000620581 FAM50AQ14320 339 aaKnown RBP20.25■□□□□ 0.83
GRIA3-208ENST00000620581 YEATS2Q9ULM3 1422 aa20.24■□□□□ 0.83
GRIA3-208ENST00000620581 CNTLNQ9NXG0 1405 aa20.23■□□□□ 0.83
GRIA3-208ENST00000620581 ABCC3O15438 1527 aa20.23■□□□□ 0.83
GRIA3-208ENST00000620581 PZPP20742 1482 aa20.22■□□□□ 0.83
GRIA3-208ENST00000620581 RAB3GAP2Q9H2M9 1393 aa20.2■□□□□ 0.82
GRIA3-208ENST00000620581 CEP152O94986 1710 aa20.2■□□□□ 0.82
GRIA3-208ENST00000620581 SPHKAPQ2M3C7 1700 aa20.19■□□□□ 0.82
GRIA3-208ENST00000620581 E9PCH4 1651 aa20.19■□□□□ 0.82
GRIA3-208ENST00000620581 PIK3C2BO00750 1634 aa20.19■□□□□ 0.82
GRIA3-208ENST00000620581 ZNF777Q9ULD5 760 aaPredicted RBP20.19■□□□□ 0.82
GRIA3-208ENST00000620581 FER1L4A9Z1Z3 1794 aa20.19■□□□□ 0.82
GRIA3-208ENST00000620581 AFAP1Q8N556 730 aa20.17■□□□□ 0.82
GRIA3-208ENST00000620581 TRPM2O94759 1503 aa20.15■□□□□ 0.82
GRIA3-208ENST00000620581 SPATA31D1Q6ZQQ2 1576 aa20.15■□□□□ 0.82
GRIA3-208ENST00000620581 PPARGC1BQ86YN6 1023 aaKnown RBP20.14■□□□□ 0.82
GRIA3-208ENST00000620581 PTPRTO14522 1441 aa20.14■□□□□ 0.81
GRIA3-208ENST00000620581 PREX1Q8TCU6 1659 aa20.13■□□□□ 0.81
GRIA3-208ENST00000620581 CLTCQ00610 1675 aaKnown RBP20.11■□□□□ 0.81
GRIA3-208ENST00000620581 KANK1Q14678 1352 aa20.1■□□□□ 0.81
GRIA3-208ENST00000620581 ZNF142P52746 1687 aaPredicted RBP20.1■□□□□ 0.81
GRIA3-208ENST00000620581 TRHP20396 242 aaPredicted RBP20.09■□□□□ 0.81
GRIA3-208ENST00000620581 RAPGEF3O95398 923 aa20.09■□□□□ 0.81
GRIA3-208ENST00000620581 NPATQ14207 1427 aa20.07■□□□□ 0.8
GRIA3-208ENST00000620581 C3P01024 1663 aa20.06■□□□□ 0.8
GRIA3-208ENST00000620581 NOS1P29475 1434 aa20.05■□□□□ 0.8
GRIA3-208ENST00000620581 DHX57Q6P158 1386 aaKnown RBP20.05■□□□□ 0.8
GRIA3-208ENST00000620581 IFT172Q9UG01 1749 aa20.04■□□□□ 0.8
GRIA3-208ENST00000620581 MADDQ8WXG6 1647 aa19.99■□□□□ 0.79
GRIA3-208ENST00000620581 SYNMO15061 1565 aa19.99■□□□□ 0.79
GRIA3-208ENST00000620581 RRP7BPQ9NSQ0 103 aa19.99■□□□□ 0.79
GRIA3-208ENST00000620581 KIF1BO60333 1816 aa19.99■□□□□ 0.79
GRIA3-208ENST00000620581 ERVK-7P63135 1459 aa19.97■□□□□ 0.79
GRIA3-208ENST00000620581 ADGRB3O60242 1522 aa19.96■□□□□ 0.79
GRIA3-208ENST00000620581 TIMELESSQ9UNS1 1208 aa19.95■□□□□ 0.78
GRIA3-208ENST00000620581 ANKRD30BQ9BXX2 1392 aa19.95■□□□□ 0.78
GRIA3-208ENST00000620581 RIMS1Q86UR5 1692 aaKnown RBP19.95■□□□□ 0.78
GRIA3-208ENST00000620581 CLTCL1P53675 1640 aa19.95■□□□□ 0.78
GRIA3-208ENST00000620581 KIAA1210Q9ULL0 1709 aa19.94■□□□□ 0.78
GRIA3-208ENST00000620581 NLRP1Q9C000 1473 aa19.93■□□□□ 0.78
GRIA3-208ENST00000620581 NUP155O75694 1391 aa19.93■□□□□ 0.78
GRIA3-208ENST00000620581 CHIC2Q9UKJ5 165 aa19.93■□□□□ 0.78
GRIA3-208ENST00000620581 MYO3AQ8NEV4 1616 aa19.92■□□□□ 0.78
GRIA3-208ENST00000620581 PLA2R1Q13018 1463 aa19.92■□□□□ 0.78
GRIA3-208ENST00000620581 PCGF6Q9BYE7 350 aa19.91■□□□□ 0.78
GRIA3-208ENST00000620581 TMEM131LA2VDJ0 1609 aa19.9■□□□□ 0.78
GRIA3-208ENST00000620581 LAMC1P11047 1609 aa19.89■□□□□ 0.77
GRIA3-208ENST00000620581 PPLO60437 1756 aa19.88■□□□□ 0.77
GRIA3-208ENST00000620581 UBR1Q8IWV7 1749 aa19.88■□□□□ 0.77
GRIA3-208ENST00000620581 MPHOSPH9Q99550 1183 aa19.88■□□□□ 0.77
GRIA3-208ENST00000620581 STAC3Q96MF2 364 aa19.87■□□□□ 0.77
GRIA3-208ENST00000620581 UGGT1Q9NYU2 1555 aa19.87■□□□□ 0.77
GRIA3-208ENST00000620581 KIF3BO15066 747 aa19.86■□□□□ 0.77
GRIA3-208ENST00000620581 MYOM2P54296 1465 aa19.86■□□□□ 0.77
GRIA3-208ENST00000620581 SETD1BQ9UPS6 1966 aaKnown RBP19.84■□□□□ 0.77
GRIA3-208ENST00000620581 ZFYVE9O95405 1425 aa19.84■□□□□ 0.77
GRIA3-208ENST00000620581 SPATA31E1Q6ZUB1 1445 aa19.84■□□□□ 0.77
GRIA3-208ENST00000620581 NRXN1Q9ULB1 1477 aa19.83■□□□□ 0.77
GRIA3-208ENST00000620581 ITGAEP38570 1179 aa19.83■□□□□ 0.76
GRIA3-208ENST00000620581 SLIT1O75093 1534 aa19.81■□□□□ 0.76
GRIA3-208ENST00000620581 UHRF1BP1Q6BDS2 1440 aa19.79■□□□□ 0.76
GRIA3-208ENST00000620581 A2ML1A8K2U0 1454 aa19.79■□□□□ 0.76
GRIA3-208ENST00000620581 ZMYM3Q14202 1370 aa19.79■□□□□ 0.76
GRIA3-208ENST00000620581 ARHGAP23Q9P227 1491 aa19.78■□□□□ 0.76
GRIA3-208ENST00000620581 PTPRMP28827 1452 aa19.78■□□□□ 0.76
GRIA3-208ENST00000620581 CEP170BQ9Y4F5 1589 aaPredicted RBP19.77■□□□□ 0.76
GRIA3-208ENST00000620581 DIP2AQ14689 1571 aa19.77■□□□□ 0.75
GRIA3-208ENST00000620581 NEXMIFQ5QGS0 1516 aa19.76■□□□□ 0.75
GRIA3-208ENST00000620581 SLC52A1Q9NWF4 448 aa19.76■□□□□ 0.75
GRIA3-208ENST00000620581 SLC4A1APQ9BWU0 796 aaKnown RBP19.75■□□□□ 0.75
GRIA3-208ENST00000620581 WASHC2CQ9Y4E1 1318 aa19.75■□□□□ 0.75
GRIA3-208ENST00000620581 CCDC144AA2RUR9 1427 aa19.74■□□□□ 0.75
GRIA3-208ENST00000620581 PRAG1Q86YV5 1406 aa19.74■□□□□ 0.75
GRIA3-208ENST00000620581 MYO5BQ9ULV0 1848 aa19.74■□□□□ 0.75
GRIA3-208ENST00000620581 POLR1AO95602 1720 aaPredicted RBP19.73■□□□□ 0.75
GRIA3-208ENST00000620581 SETBP1Q9Y6X0 1596 aa19.73■□□□□ 0.75
GRIA3-208ENST00000620581 RPGRIP1LQ68CZ1 1315 aa19.73■□□□□ 0.75
GRIA3-208ENST00000620581 SETD1AO15047 1707 aaKnown RBP19.72■□□□□ 0.75
GRIA3-208ENST00000620581 ZEB1P37275 1124 aaPredicted RBP19.71■□□□□ 0.75
GRIA3-208ENST00000620581 PKD2Q13563 968 aa19.71■□□□□ 0.75
GRIA3-208ENST00000620581 TNRQ92752 1358 aa19.71■□□□□ 0.75
GRIA3-208ENST00000620581 MYT1LQ9UL68 1186 aa19.71■□□□□ 0.75
GRIA3-208ENST00000620581 KNDC1Q76NI1 1749 aa19.69■□□□□ 0.74
GRIA3-208ENST00000620581 TRPM1Q7Z4N2 1603 aa19.69■□□□□ 0.74
GRIA3-208ENST00000620581 TRIM52Q96A61 297 aa19.68■□□□□ 0.74
GRIA3-208ENST00000620581 MED14O60244 1454 aa19.64■□□□□ 0.73
GRIA3-208ENST00000620581 GGT6Q6P531 493 aa19.63■□□□□ 0.73
GRIA3-208ENST00000620581 NRXN3Q9Y4C0 1643 aa19.62■□□□□ 0.73
GRIA3-208ENST00000620581 RALGAPBQ86X10 1494 aa19.61■□□□□ 0.73
GRIA3-208ENST00000620581 IQGAP1P46940 1657 aa19.61■□□□□ 0.73
GRIA3-208ENST00000620581 ESF1Q9H501 851 aaKnown RBP19.58■□□□□ 0.72
GRIA3-208ENST00000620581 GPRASP1Q5JY77 1395 aa19.58■□□□□ 0.72
GRIA3-208ENST00000620581 PIK3C2GO75747 1445 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms