RNA–Protein interactions for RNA: ENST00000620277.4

DKC1-213, Transcript of dyskerin pseudouridine synthase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DKC1, Length 3,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DKC1-213ENST00000620277 MYT1LQ9UL68 1186 aa21.27■■□□□ 1
DKC1-213ENST00000620277 CCDC146Q8IYE0 955 aa21.27■□□□□ 0.99
DKC1-213ENST00000620277 KTN1Q86UP2 1357 aaKnown RBP21.27■□□□□ 0.99
DKC1-213ENST00000620277 C9orf84Q5VXU9 1444 aa21.26■□□□□ 0.99
DKC1-213ENST00000620277 RNF123Q5XPI4 1314 aa21.25■□□□□ 0.99
DKC1-213ENST00000620277 KIAA0556O60303 1618 aa21.24■□□□□ 0.99
DKC1-213ENST00000620277 RGS3P49796 1198 aa21.24■□□□□ 0.99
DKC1-213ENST00000620277 ADAMTS8Q9UP79 889 aa21.24■□□□□ 0.99
DKC1-213ENST00000620277 RAPGEF6Q8TEU7 1601 aa21.24■□□□□ 0.99
DKC1-213ENST00000620277 IL27Q8NEV9 243 aa21.23■□□□□ 0.99
DKC1-213ENST00000620277 MRC2Q9UBG0 1479 aa21.23■□□□□ 0.99
DKC1-213ENST00000620277 GRIN2AQ12879 1464 aa21.22■□□□□ 0.99
DKC1-213ENST00000620277 ERCC6Q03468 1493 aa21.2■□□□□ 0.98
DKC1-213ENST00000620277 BRD4O60885 1362 aaPredicted RBP21.2■□□□□ 0.98
DKC1-213ENST00000620277 DISP3Q9P2K9 1392 aa21.2■□□□□ 0.98
DKC1-213ENST00000620277 PER1O15534 1290 aaPredicted RBP21.18■□□□□ 0.98
DKC1-213ENST00000620277 KDM5CP41229 1560 aa21.17■□□□□ 0.98
DKC1-213ENST00000620277 CCDC144AA2RUR9 1427 aa21.16■□□□□ 0.98
DKC1-213ENST00000620277 MBD5Q9P267 1494 aa21.16■□□□□ 0.98
DKC1-213ENST00000620277 TNNT2P45379 298 aaPredicted RBP21.16■□□□□ 0.98
DKC1-213ENST00000620277 WDR43Q15061 677 aaKnown RBP eCLIP21.16■□□□□ 0.983e-6■■■■■ 38.4
DKC1-213ENST00000620277 NEUROD2Q15784 382 aa21.15■□□□□ 0.98
DKC1-213ENST00000620277 BACH2Q9BYV9 841 aa21.15■□□□□ 0.98
DKC1-213ENST00000620277 TCERG1O14776 1098 aaKnown RBP21.15■□□□□ 0.98
DKC1-213ENST00000620277 CARMIL2Q6F5E8 1435 aa21.14■□□□□ 0.98
DKC1-213ENST00000620277 LRPPRCP42704 1394 aaKnown RBP21.14■□□□□ 0.98
DKC1-213ENST00000620277 KNSTRNQ9Y448 316 aa21.13■□□□□ 0.97
DKC1-213ENST00000620277 ARID4BQ4LE39 1312 aaPredicted RBP21.13■□□□□ 0.97
DKC1-213ENST00000620277 TMF1P82094 1093 aa21.12■□□□□ 0.97
DKC1-213ENST00000620277 DAXXQ9UER7 740 aaPredicted RBP21.12■□□□□ 0.97
DKC1-213ENST00000620277 RALGAPBQ86X10 1494 aa21.11■□□□□ 0.97
DKC1-213ENST00000620277 IFT140Q96RY7 1462 aa21.11■□□□□ 0.97
DKC1-213ENST00000620277 TESK2Q96S53 571 aa21.1■□□□□ 0.97
DKC1-213ENST00000620277 ATP10BO94823 1461 aa21.1■□□□□ 0.97
DKC1-213ENST00000620277 MAGI1Q96QZ7 1491 aaPredicted RBP21.07■□□□□ 0.96
DKC1-213ENST00000620277 ANO8Q9HCE9 1232 aaPredicted RBP21.05■□□□□ 0.96
DKC1-213ENST00000620277 APAF1O14727 1248 aa21.04■□□□□ 0.96
DKC1-213ENST00000620277 BCAR3O75815 825 aa21.04■□□□□ 0.96
DKC1-213ENST00000620277 CHGAP10645 457 aaKnown RBP21.04■□□□□ 0.96
DKC1-213ENST00000620277 PARD3Q8TEW0 1356 aa21.04■□□□□ 0.96
DKC1-213ENST00000620277 SPINK5Q9NQ38 1064 aaPredicted RBP21.03■□□□□ 0.96
DKC1-213ENST00000620277 CEP170Q5SW79 1584 aa21.03■□□□□ 0.96
DKC1-213ENST00000620277 PTPRGP23470 1445 aa21.03■□□□□ 0.96
DKC1-213ENST00000620277 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.03■□□□□ 0.96
DKC1-213ENST00000620277 UHRF1BP1Q6BDS2 1440 aa21.03■□□□□ 0.96
DKC1-213ENST00000620277 PPP2R1AP30153 589 aa21.03■□□□□ 0.96
DKC1-213ENST00000620277 PDE3BQ13370 1112 aa21.03■□□□□ 0.96
DKC1-213ENST00000620277 EIF4G3O43432 1585 aaKnown RBP21.02■□□□□ 0.96
DKC1-213ENST00000620277 RRP7AQ9Y3A4 280 aaKnown RBP21.02■□□□□ 0.96
DKC1-213ENST00000620277 ARXQ96QS3 562 aa21.01■□□□□ 0.95
DKC1-213ENST00000620277 PRAG1Q86YV5 1406 aa21.01■□□□□ 0.95
DKC1-213ENST00000620277 AFAP1Q8N556 730 aa21■□□□□ 0.95
DKC1-213ENST00000620277 FRAT1Q92837 279 aaPredicted RBP21■□□□□ 0.95
DKC1-213ENST00000620277 ADGRL2O95490 1459 aa21■□□□□ 0.95
DKC1-213ENST00000620277 PLEKHH2Q8IVE3 1493 aa21■□□□□ 0.95
DKC1-213ENST00000620277 PLEKHH1Q9ULM0 1364 aa21■□□□□ 0.95
DKC1-213ENST00000620277 CANXP27824 592 aaKnown RBP20.98■□□□□ 0.95
DKC1-213ENST00000620277 GOLGA2Q08379 1002 aa20.98■□□□□ 0.95
DKC1-213ENST00000620277 BCL2L13Q9BXK5 485 aa20.98■□□□□ 0.95
DKC1-213ENST00000620277 DMRT2Q9Y5R5 561 aa20.98■□□□□ 0.95
DKC1-213ENST00000620277 ERBINQ96RT1 1412 aa20.98■□□□□ 0.95
DKC1-213ENST00000620277 BRPF3Q9ULD4 1205 aa20.97■□□□□ 0.95
DKC1-213ENST00000620277 POLR1AO95602 1720 aaPredicted RBP20.97■□□□□ 0.95
DKC1-213ENST00000620277 FAM135AQ9P2D6 1515 aa20.96■□□□□ 0.95
DKC1-213ENST00000620277 DUSP27Q5VZP5 1158 aa20.96■□□□□ 0.95
DKC1-213ENST00000620277 ITSN2Q9NZM3 1697 aa20.94■□□□□ 0.94
DKC1-213ENST00000620277 SYNJ2O15056 1496 aa20.94■□□□□ 0.94
DKC1-213ENST00000620277 A2MP01023 1474 aa20.94■□□□□ 0.94
DKC1-213ENST00000620277 ADGBQ8N7X0 1667 aa20.94■□□□□ 0.94
DKC1-213ENST00000620277 PLA2R1Q13018 1463 aa20.93■□□□□ 0.94
DKC1-213ENST00000620277 NUTM2DQ5VT03 806 aaPredicted RBP20.93■□□□□ 0.94
DKC1-213ENST00000620277 NFKBIBQ15653 356 aa20.92■□□□□ 0.94
DKC1-213ENST00000620277 ABCC10Q5T3U5 1492 aa20.92■□□□□ 0.94
DKC1-213ENST00000620277 CFAP70Q5T0N1 1121 aa20.92■□□□□ 0.94
DKC1-213ENST00000620277 MS4A1P11836 297 aa20.91■□□□□ 0.94
DKC1-213ENST00000620277 PANK1Q8TE04 598 aa20.91■□□□□ 0.94
DKC1-213ENST00000620277 CLUAP1Q96AJ1 413 aa20.91■□□□□ 0.94
DKC1-213ENST00000620277 COG6Q9Y2V7 657 aa20.91■□□□□ 0.94
DKC1-213ENST00000620277 CDC42BPAQ5VT25 1732 aa20.91■□□□□ 0.94
DKC1-213ENST00000620277 ARHGAP5Q13017 1502 aa20.91■□□□□ 0.94
DKC1-213ENST00000620277 SPRYD3Q8NCJ5 442 aa20.91■□□□□ 0.94
DKC1-213ENST00000620277 SYCP2Q9BX26 1530 aa20.89■□□□□ 0.93
DKC1-213ENST00000620277 CCDC141Q6ZP82 1450 aa20.88■□□□□ 0.93
DKC1-213ENST00000620277 FRAT2O75474 233 aaPredicted RBP20.88■□□□□ 0.93
DKC1-213ENST00000620277 AMER1Q5JTC6 1135 aaPredicted RBP20.88■□□□□ 0.93
DKC1-213ENST00000620277 PPM1GO15355 546 aaPredicted RBP20.87■□□□□ 0.93
DKC1-213ENST00000620277 SLKQ9H2G2 1235 aaPredicted RBP20.87■□□□□ 0.93
DKC1-213ENST00000620277 TNNQ9UQP3 1299 aa20.87■□□□□ 0.93
DKC1-213ENST00000620277 IGHDP01880 384 aa20.86■□□□□ 0.93
DKC1-213ENST00000620277 SAFB2Q14151 953 aaKnown RBP eCLIP20.86■□□□□ 0.93
DKC1-213ENST00000620277 ARHGEF12Q9NZN5 1544 aa20.86■□□□□ 0.93
DKC1-213ENST00000620277 KIF3BO15066 747 aa20.86■□□□□ 0.93
DKC1-213ENST00000620277 KDM5DQ9BY66 1539 aa20.85■□□□□ 0.93
DKC1-213ENST00000620277 MAGI2Q86UL8 1455 aa20.85■□□□□ 0.93
DKC1-213ENST00000620277 FAM161AQ3B820 660 aa20.84■□□□□ 0.93
DKC1-213ENST00000620277 CENPQQ7L2Z9 268 aaPredicted RBP20.84■□□□□ 0.93
DKC1-213ENST00000620277 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.84■□□□□ 0.93
DKC1-213ENST00000620277 DDRGK1Q96HY6 314 aa20.84■□□□□ 0.93
DKC1-213ENST00000620277 C8orf34Q49A92 452 aa20.84■□□□□ 0.93
DKC1-213ENST00000620277 CROCC2H7BZ55 1655 aa20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms