RNA–Protein interactions for RNA: ENST00000619898.4

SPCS1-206, Transcript of signal peptidase complex subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPCS1, Length 4,254 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS1-206ENST00000619898 NBPF1Q3BBV0 1214 aa15.82■□□□□ 0.12
SPCS1-206ENST00000619898 ABCC5O15440 1437 aa15.82■□□□□ 0.12
SPCS1-206ENST00000619898 GRIN2BQ13224 1484 aa15.82■□□□□ 0.12
SPCS1-206ENST00000619898 FAM161AQ3B820 660 aa15.82■□□□□ 0.12
SPCS1-206ENST00000619898 ANP32BQ92688 251 aaKnown RBP15.81■□□□□ 0.12
SPCS1-206ENST00000619898 EFCAB2Q5VUJ9 269 aa15.8■□□□□ 0.12
SPCS1-206ENST00000619898 SPRYD3Q8NCJ5 442 aa15.8■□□□□ 0.12
SPCS1-206ENST00000619898 TROQ12816 1431 aaPredicted RBP15.79■□□□□ 0.12
SPCS1-206ENST00000619898 ADAMTS8Q9UP79 889 aa15.79■□□□□ 0.12
SPCS1-206ENST00000619898 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.79■□□□□ 0.12
SPCS1-206ENST00000619898 SNAPC4Q5SXM2 1469 aa15.79■□□□□ 0.12
SPCS1-206ENST00000619898 APAF1O14727 1248 aa15.78■□□□□ 0.12
SPCS1-206ENST00000619898 U2SURPO15042 1029 aaKnown RBP15.78■□□□□ 0.12
SPCS1-206ENST00000619898 BACH2Q9BYV9 841 aa15.78■□□□□ 0.12
SPCS1-206ENST00000619898 PLEKHG5O94827 1062 aa15.78■□□□□ 0.12
SPCS1-206ENST00000619898 KANK1Q14678 1352 aa15.77■□□□□ 0.12
SPCS1-206ENST00000619898 GSE1Q14687 1217 aa15.77■□□□□ 0.12
SPCS1-206ENST00000619898 UGGT2Q9NYU1 1516 aa15.77■□□□□ 0.11
SPCS1-206ENST00000619898 MAPK8IP3Q9UPT6 1336 aa15.76■□□□□ 0.11
SPCS1-206ENST00000619898 CENPJQ9HC77 1338 aaPredicted RBP15.76■□□□□ 0.11
SPCS1-206ENST00000619898 CLUAP1Q96AJ1 413 aa15.76■□□□□ 0.11
SPCS1-206ENST00000619898 URB2Q14146 1524 aaKnown RBP15.76■□□□□ 0.11
SPCS1-206ENST00000619898 IQGAP2Q13576 1575 aa15.76■□□□□ 0.11
SPCS1-206ENST00000619898 C9orf84Q5VXU9 1444 aa15.75■□□□□ 0.11
SPCS1-206ENST00000619898 PTPRGP23470 1445 aa15.74■□□□□ 0.11
SPCS1-206ENST00000619898 RRP7AQ9Y3A4 280 aaKnown RBP15.73■□□□□ 0.11
SPCS1-206ENST00000619898 EIF3AQ14152 1382 aaKnown RBP15.73■□□□□ 0.11
SPCS1-206ENST00000619898 KIF3BO15066 747 aa15.73■□□□□ 0.11
SPCS1-206ENST00000619898 MYH16Q9H6N6 1097 aa15.73■□□□□ 0.11
SPCS1-206ENST00000619898 COG6Q9Y2V7 657 aa15.72■□□□□ 0.11
SPCS1-206ENST00000619898 U2AF1L5P0DN76 240 aaPredicted RBP15.72■□□□□ 0.11
SPCS1-206ENST00000619898 U2AF1Q01081 240 aaKnown RBP eCLIP15.72■□□□□ 0.11
SPCS1-206ENST00000619898 DNAJC5BQ9UF47 199 aa15.72■□□□□ 0.11
SPCS1-206ENST00000619898 SPAG9O60271 1321 aaKnown RBP15.72■□□□□ 0.11
SPCS1-206ENST00000619898 NFKBIBQ15653 356 aa15.72■□□□□ 0.11
SPCS1-206ENST00000619898 SAFB2Q14151 953 aaKnown RBP eCLIP15.71■□□□□ 0.11
SPCS1-206ENST00000619898 E9PSI1 815 aa15.71■□□□□ 0.11
SPCS1-206ENST00000619898 SKAP1Q86WV1 359 aa15.71■□□□□ 0.11
SPCS1-206ENST00000619898 TRIM44Q96DX7 344 aaPredicted RBP15.71■□□□□ 0.1
SPCS1-206ENST00000619898 BCL2L13Q9BXK5 485 aa15.71■□□□□ 0.1
SPCS1-206ENST00000619898 RWDD1Q9H446 243 aaPredicted RBP15.71■□□□□ 0.1
SPCS1-206ENST00000619898 THOC2Q8NI27 1593 aaKnown RBP15.71■□□□□ 0.1
SPCS1-206ENST00000619898 PMFBP1Q8TBY8 1022 aa15.7■□□□□ 0.1
SPCS1-206ENST00000619898 WASHC2CQ9Y4E1 1318 aa15.7■□□□□ 0.1
SPCS1-206ENST00000619898 IL27Q8NEV9 243 aa15.69■□□□□ 0.1
SPCS1-206ENST00000619898 CAMSAP2Q08AD1 1489 aa15.69■□□□□ 0.1
SPCS1-206ENST00000619898 CTTNBP2Q8WZ74 1663 aa15.69■□□□□ 0.1
SPCS1-206ENST00000619898 L1TD1Q5T7N2 865 aaKnown RBP15.69■□□□□ 0.1
SPCS1-206ENST00000619898 C14orf37Q86TY3 774 aa15.68■□□□□ 0.1
SPCS1-206ENST00000619898 GZF1Q9H116 711 aaPredicted RBP15.68■□□□□ 0.1
SPCS1-206ENST00000619898 PPP2R1AP30153 589 aa15.68■□□□□ 0.1
SPCS1-206ENST00000619898 MLECQ14165 292 aa15.68■□□□□ 0.1
SPCS1-206ENST00000619898 TRHP20396 242 aaPredicted RBP15.68■□□□□ 0.1
SPCS1-206ENST00000619898 CGNL1Q0VF96 1302 aa15.68■□□□□ 0.1
SPCS1-206ENST00000619898 KIAA0586Q9BVV6 1533 aa15.68■□□□□ 0.1
SPCS1-206ENST00000619898 HSCBQ8IWL3 235 aa15.68■□□□□ 0.1
SPCS1-206ENST00000619898 TCOF1Q13428 1488 aaKnown RBP15.66■□□□□ 0.1
SPCS1-206ENST00000619898 GLIPR1L2Q4G1C9 344 aa15.66■□□□□ 0.1
SPCS1-206ENST00000619898 GGT6Q6P531 493 aa15.66■□□□□ 0.1
SPCS1-206ENST00000619898 NAP1L5Q96NT1 182 aaPredicted RBP15.66■□□□□ 0.1
SPCS1-206ENST00000619898 LAMC3Q9Y6N6 1575 aa15.66■□□□□ 0.1
SPCS1-206ENST00000619898 GOLGA6L22H0YM25 854 aa15.65■□□□□ 0.1
SPCS1-206ENST00000619898 HSP90AB1P08238 724 aaKnown RBP15.65■□□□□ 0.1
SPCS1-206ENST00000619898 TRAK1Q9UPV9 953 aa15.65■□□□□ 0.1
SPCS1-206ENST00000619898 MFAP1P55081 439 aaKnown RBP15.65■□□□□ 0.1
SPCS1-206ENST00000619898 SRPK2P78362 688 aaKnown RBP15.65■□□□□ 0.1
SPCS1-206ENST00000619898 ITPRIPQ8IWB1 547 aa15.65■□□□□ 0.1
SPCS1-206ENST00000619898 POGKQ9P215 609 aa15.65■□□□□ 0.1
SPCS1-206ENST00000619898 PLB1Q6P1J6 1458 aa15.64■□□□□ 0.09
SPCS1-206ENST00000619898 SMC4Q9NTJ3 1288 aa15.63■□□□□ 0.09
SPCS1-206ENST00000619898 ZBTB7CA1YPR0 619 aa15.63■□□□□ 0.09
SPCS1-206ENST00000619898 C20orf194Q5TEA3 1177 aa15.63■□□□□ 0.09
SPCS1-206ENST00000619898 MRC2Q9UBG0 1479 aa15.63■□□□□ 0.09
SPCS1-206ENST00000619898 NCLP19338 710 aaKnown RBP15.63■□□□□ 0.09
SPCS1-206ENST00000619898 DHX29Q7Z478 1369 aaKnown RBP15.62■□□□□ 0.09
SPCS1-206ENST00000619898 PANK1Q8TE04 598 aa15.62■□□□□ 0.09
SPCS1-206ENST00000619898 STK26Q9P289 416 aa15.62■□□□□ 0.09
SPCS1-206ENST00000619898 BRPF3Q9ULD4 1205 aa15.61■□□□□ 0.09
SPCS1-206ENST00000619898 ERBINQ96RT1 1412 aa15.61■□□□□ 0.09
SPCS1-206ENST00000619898 IFT140Q96RY7 1462 aa15.61■□□□□ 0.09
SPCS1-206ENST00000619898 BCAR3O75815 825 aa15.6■□□□□ 0.09
SPCS1-206ENST00000619898 FRAT2O75474 233 aaPredicted RBP15.6■□□□□ 0.09
SPCS1-206ENST00000619898 NUTM2DQ5VT03 806 aaPredicted RBP15.58■□□□□ 0.09
SPCS1-206ENST00000619898 ARHGEF11O15085 1522 aa15.58■□□□□ 0.08
SPCS1-206ENST00000619898 IPO8O15397 1037 aaKnown RBP15.58■□□□□ 0.08
SPCS1-206ENST00000619898 NGEFQ8N5V2 710 aa15.58■□□□□ 0.08
SPCS1-206ENST00000619898 SYNJ2O15056 1496 aa15.57■□□□□ 0.08
SPCS1-206ENST00000619898 GOLGA6L3A6NEY3 463 aa15.57■□□□□ 0.08
SPCS1-206ENST00000619898 TEX14Q8IWB6 1497 aa15.56■□□□□ 0.08
SPCS1-206ENST00000619898 PNNQ9H307 717 aaKnown RBP15.56■□□□□ 0.08
SPCS1-206ENST00000619898 GPATCH8Q9UKJ3 1502 aaKnown RBP15.56■□□□□ 0.08
SPCS1-206ENST00000619898 A0A0G2JS52 829 aa15.56■□□□□ 0.08
SPCS1-206ENST00000619898 CHMP4BQ9H444 224 aaKnown RBP15.56■□□□□ 0.08
SPCS1-206ENST00000619898 CFAP70Q5T0N1 1121 aa15.55■□□□□ 0.08
SPCS1-206ENST00000619898 ANO8Q9HCE9 1232 aaPredicted RBP15.55■□□□□ 0.08
SPCS1-206ENST00000619898 ARHGAP5Q13017 1502 aa15.55■□□□□ 0.08
SPCS1-206ENST00000619898 ZKSCAN2Q63HK3 967 aa15.54■□□□□ 0.08
SPCS1-206ENST00000619898 MAGI3Q5TCQ9 1506 aa15.54■□□□□ 0.08
SPCS1-206ENST00000619898 NUP153P49790 1475 aaKnown RBP15.54■□□□□ 0.08
SPCS1-206ENST00000619898 RALGAPBQ86X10 1494 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms