RNA–Protein interactions for RNA: ENST00000619785.1

SENP3-210, Transcript of SUMO specific peptidase 3, humanhuman

TSL 3

Gene SENP3, Length 634 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-210ENST00000619785 BCL11BQ9C0K0 894 aaPredicted RBP12.48□□□□□ -0.41
SENP3-210ENST00000619785 IQSEC2Q5JU85 1478 aa12.47□□□□□ -0.41
SENP3-210ENST00000619785 SOCS7O14512 581 aa12.47□□□□□ -0.41
SENP3-210ENST00000619785 MNX1P50219 401 aaPredicted RBP12.46□□□□□ -0.41
SENP3-210ENST00000619785 RASEFQ8IZ41 740 aa12.46□□□□□ -0.41
SENP3-210ENST00000619785 SGIP1Q9BQI5 828 aa12.46□□□□□ -0.41
SENP3-210ENST00000619785 KDM5CP41229 1560 aa12.46□□□□□ -0.42
SENP3-210ENST00000619785 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.45□□□□□ -0.42
SENP3-210ENST00000619785 HSPA2P54652 639 aa12.45□□□□□ -0.42
SENP3-210ENST00000619785 ZFP91Q96JP5 570 aaPredicted RBP12.45□□□□□ -0.42
SENP3-210ENST00000619785 MYO5CQ9NQX4 1742 aa12.45□□□□□ -0.42
SENP3-210ENST00000619785 SPATA31D1Q6ZQQ2 1576 aa12.44□□□□□ -0.42
SENP3-210ENST00000619785 LTBP4Q8N2S1 1624 aa12.44□□□□□ -0.42
SENP3-210ENST00000619785 ATP10AO60312 1499 aa12.43□□□□□ -0.42
SENP3-210ENST00000619785 PYGBP11216 843 aa12.43□□□□□ -0.42
SENP3-210ENST00000619785 ILDR2Q71H61 639 aa12.43□□□□□ -0.42
SENP3-210ENST00000619785 FAM9AQ8IZU1 332 aaPredicted RBP12.43□□□□□ -0.42
SENP3-210ENST00000619785 PTPRTO14522 1441 aa12.43□□□□□ -0.42
SENP3-210ENST00000619785 PLCH2O75038 1416 aa12.43□□□□□ -0.42
SENP3-210ENST00000619785 C9orf84Q5VXU9 1444 aa12.43□□□□□ -0.42
SENP3-210ENST00000619785 ARID4BQ4LE39 1312 aaPredicted RBP12.42□□□□□ -0.42
SENP3-210ENST00000619785 C3P01024 1663 aa12.42□□□□□ -0.42
SENP3-210ENST00000619785 REM2Q8IYK8 340 aaPredicted RBP12.42□□□□□ -0.42
SENP3-210ENST00000619785 DIP2CQ9Y2E4 1556 aa12.39□□□□□ -0.43
SENP3-210ENST00000619785 AGLP35573 1532 aa12.38□□□□□ -0.43
SENP3-210ENST00000619785 PLEKHD1A6NEE1 506 aa12.37□□□□□ -0.43
SENP3-210ENST00000619785 ARID3CA6NKF2 412 aa12.37□□□□□ -0.43
SENP3-210ENST00000619785 DISP3Q9P2K9 1392 aa12.37□□□□□ -0.43
SENP3-210ENST00000619785 MROH2AA6NES4 1674 aa12.37□□□□□ -0.43
SENP3-210ENST00000619785 SCAPERQ9BY12 1400 aa12.37□□□□□ -0.43
SENP3-210ENST00000619785 ZNF518AQ6AHZ1 1483 aa12.36□□□□□ -0.43
SENP3-210ENST00000619785 P3H3Q8IVL6 736 aa12.36□□□□□ -0.43
SENP3-210ENST00000619785 CDC42BPBQ9Y5S2 1711 aa12.35□□□□□ -0.43
SENP3-210ENST00000619785 ABCA6Q8N139 1617 aa12.35□□□□□ -0.43
SENP3-210ENST00000619785 EEA1Q15075 1411 aa12.35□□□□□ -0.43
SENP3-210ENST00000619785 UHRF1BP1Q6BDS2 1440 aa12.35□□□□□ -0.43
SENP3-210ENST00000619785 MLH3Q9UHC1 1453 aa12.34□□□□□ -0.43
SENP3-210ENST00000619785 CDK13Q14004 1512 aaKnown RBP12.34□□□□□ -0.43
SENP3-210ENST00000619785 LRRIQ1Q96JM4 1722 aa12.34□□□□□ -0.43
SENP3-210ENST00000619785 ZNF142P52746 1687 aaPredicted RBP12.33□□□□□ -0.44
SENP3-210ENST00000619785 KIF14Q15058 1648 aa12.33□□□□□ -0.44
SENP3-210ENST00000619785 NCOA1Q15788 1441 aa12.32□□□□□ -0.44
SENP3-210ENST00000619785 KIDINS220Q9ULH0 1771 aa12.31□□□□□ -0.44
SENP3-210ENST00000619785 WDR70Q9NW82 654 aa12.31□□□□□ -0.44
SENP3-210ENST00000619785 ITSN2Q9NZM3 1697 aa12.31□□□□□ -0.44
SENP3-210ENST00000619785 PREX2Q70Z35 1606 aa12.3□□□□□ -0.44
SENP3-210ENST00000619785 ZNF467Q7Z7K2 595 aaPredicted RBP12.29□□□□□ -0.44
SENP3-210ENST00000619785 TRAPPC8Q9Y2L5 1435 aa12.28□□□□□ -0.44
SENP3-210ENST00000619785 ABCC1P33527 1531 aa12.28□□□□□ -0.44
SENP3-210ENST00000619785 NPATQ14207 1427 aa12.28□□□□□ -0.44
SENP3-210ENST00000619785 CNTLNQ9NXG0 1405 aa12.27□□□□□ -0.45
SENP3-210ENST00000619785 PITPNM1O00562 1244 aa12.26□□□□□ -0.45
SENP3-210ENST00000619785 EFCAB2Q5VUJ9 269 aa12.26□□□□□ -0.45
SENP3-210ENST00000619785 PLA2R1Q13018 1463 aa12.26□□□□□ -0.45
SENP3-210ENST00000619785 CEBPAP49715 358 aaPredicted RBP12.25□□□□□ -0.45
SENP3-210ENST00000619785 TROQ12816 1431 aaPredicted RBP12.25□□□□□ -0.45
SENP3-210ENST00000619785 CDC42BPAQ5VT25 1732 aa12.25□□□□□ -0.45
SENP3-210ENST00000619785 MLECQ14165 292 aa12.24□□□□□ -0.45
SENP3-210ENST00000619785 CAMSAP1Q5T5Y3 1602 aa12.24□□□□□ -0.45
SENP3-210ENST00000619785 FMN1Q68DA7 1419 aa12.24□□□□□ -0.45
SENP3-210ENST00000619785 TSPYL2Q9H2G4 693 aaPredicted RBP12.24□□□□□ -0.45
SENP3-210ENST00000619785 SUPT6HQ7KZ85 1726 aaKnown RBP12.23□□□□□ -0.45
SENP3-210ENST00000619785 MYO3AQ8NEV4 1616 aa12.23□□□□□ -0.45
SENP3-210ENST00000619785 PLXNC1O60486 1568 aa12.23□□□□□ -0.45
SENP3-210ENST00000619785 ARHGAP5Q13017 1502 aa12.23□□□□□ -0.45
SENP3-210ENST00000619785 TCOF1Q13428 1488 aaKnown RBP12.23□□□□□ -0.45
SENP3-210ENST00000619785 PDAP1Q13442 181 aaKnown RBP12.22□□□□□ -0.45
SENP3-210ENST00000619785 ARHGAP35Q9NRY4 1499 aa12.21□□□□□ -0.46
SENP3-210ENST00000619785 SAMD9LQ8IVG5 1584 aa12.19□□□□□ -0.46
SENP3-210ENST00000619785 CEP170BQ9Y4F5 1589 aaPredicted RBP12.19□□□□□ -0.46
SENP3-210ENST00000619785 AFAP1Q8N556 730 aa12.19□□□□□ -0.46
SENP3-210ENST00000619785 INO80Q9ULG1 1556 aaPredicted RBP12.18□□□□□ -0.46
SENP3-210ENST00000619785 POLR1AO95602 1720 aaPredicted RBP12.18□□□□□ -0.46
SENP3-210ENST00000619785 GTF3C3Q9Y5Q9 886 aa12.18□□□□□ -0.46
SENP3-210ENST00000619785 CLTCQ00610 1675 aaKnown RBP12.17□□□□□ -0.46
SENP3-210ENST00000619785 CLIP1P30622 1438 aa12.17□□□□□ -0.46
SENP3-210ENST00000619785 TULP1O00294 542 aaPredicted RBP12.16□□□□□ -0.46
SENP3-210ENST00000619785 CDK11AQ9UQ88 783 aaPredicted RBP12.16□□□□□ -0.46
SENP3-210ENST00000619785 MED1Q15648 1581 aaPredicted RBP12.16□□□□□ -0.46
SENP3-210ENST00000619785 CHADLQ6NUI6 762 aa12.15□□□□□ -0.46
SENP3-210ENST00000619785 KCNV2Q8TDN2 545 aa12.15□□□□□ -0.46
SENP3-210ENST00000619785 PTPRKQ15262 1439 aa12.14□□□□□ -0.47
SENP3-210ENST00000619785 ADGBQ8N7X0 1667 aa12.14□□□□□ -0.47
SENP3-210ENST00000619785 CADPS2Q86UW7 1296 aa12.14□□□□□ -0.47
SENP3-210ENST00000619785 CCDC18Q5T9S5 1454 aa12.14□□□□□ -0.47
SENP3-210ENST00000619785 NEURL4Q96JN8 1562 aa12.13□□□□□ -0.47
SENP3-210ENST00000619785 DNMT1P26358 1616 aaKnown RBP12.13□□□□□ -0.47
SENP3-210ENST00000619785 ALKQ9UM73 1620 aa12.13□□□□□ -0.47
SENP3-210ENST00000619785 PCDHB8Q9UN66 801 aa12.13□□□□□ -0.47
SENP3-210ENST00000619785 PCDHB13Q9Y5F0 798 aa12.13□□□□□ -0.47
SENP3-210ENST00000619785 ZMYM3Q14202 1370 aa12.13□□□□□ -0.47
SENP3-210ENST00000619785 CPS1P31327 1500 aa12.12□□□□□ -0.47
SENP3-210ENST00000619785 FAM135AQ9P2D6 1515 aa12.12□□□□□ -0.47
SENP3-210ENST00000619785 LMOD2Q6P5Q4 547 aa12.12□□□□□ -0.47
SENP3-210ENST00000619785 ERICH6Q7L0X2 663 aa12.12□□□□□ -0.47
SENP3-210ENST00000619785 TIMELESSQ9UNS1 1208 aa12.12□□□□□ -0.47
SENP3-210ENST00000619785 FARP1Q9Y4F1 1045 aaPredicted RBP12.12□□□□□ -0.47
SENP3-210ENST00000619785 ATP7AQ04656 1500 aa12.11□□□□□ -0.47
SENP3-210ENST00000619785 PSEN1P49768 467 aa12.11□□□□□ -0.47
SENP3-210ENST00000619785 TMEM132AQ24JP5 1023 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms