RNA–Protein interactions for RNA: ENST00000619655.4

MMP28-207, Transcript of matrix metallopeptidase 28, humanhuman

TSL 2

Gene MMP28, Length 2,336 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-207ENST00000619655 KDM2AQ9Y2K7 1162 aa28.37■■■□□ 2.13
MMP28-207ENST00000619655 DCAF11Q8TEB1 546 aa28.34■■■□□ 2.13
MMP28-207ENST00000619655 ZNF518AQ6AHZ1 1483 aa28.34■■■□□ 2.13
MMP28-207ENST00000619655 CFAP74Q9C0B2 1584 aa28.34■■■□□ 2.13
MMP28-207ENST00000619655 PLA2R1Q13018 1463 aa28.33■■■□□ 2.13
MMP28-207ENST00000619655 KIF3BO15066 747 aa28.32■■■□□ 2.12
MMP28-207ENST00000619655 PELP1Q8IZL8 1130 aaKnown RBP28.32■■■□□ 2.12
MMP28-207ENST00000619655 RGL3Q3MIN7 710 aa28.31■■■□□ 2.12
MMP28-207ENST00000619655 WASHC2AQ641Q2 1341 aa28.31■■■□□ 2.12
MMP28-207ENST00000619655 KIDINS220Q9ULH0 1771 aa28.3■■■□□ 2.12
MMP28-207ENST00000619655 SCAF1Q9H7N4 1312 aaKnown RBP28.27■■■□□ 2.12
MMP28-207ENST00000619655 DHX29Q7Z478 1369 aaKnown RBP28.27■■■□□ 2.12
MMP28-207ENST00000619655 POGZQ7Z3K3 1410 aa28.26■■■□□ 2.11
MMP28-207ENST00000619655 DEPDC5O75140 1603 aa28.26■■■□□ 2.11
MMP28-207ENST00000619655 E9PCH4 1651 aa28.24■■■□□ 2.11
MMP28-207ENST00000619655 UHRF1BP1Q6BDS2 1440 aa28.24■■■□□ 2.11
MMP28-207ENST00000619655 C11orf95C9JLR9 678 aaPredicted RBP28.24■■■□□ 2.11
MMP28-207ENST00000619655 ANP32CO43423 234 aa28.23■■■□□ 2.11
MMP28-207ENST00000619655 KANK1Q14678 1352 aa28.23■■■□□ 2.11
MMP28-207ENST00000619655 SPATA31E1Q6ZUB1 1445 aa28.22■■■□□ 2.11
MMP28-207ENST00000619655 RAPGEF3O95398 923 aa28.21■■■□□ 2.11
MMP28-207ENST00000619655 USP47Q96K76 1375 aa28.21■■■□□ 2.11
MMP28-207ENST00000619655 EIF2AK4Q9P2K8 1649 aaKnown RBP28.2■■■□□ 2.1
MMP28-207ENST00000619655 KDM5CP41229 1560 aa28.2■■■□□ 2.1
MMP28-207ENST00000619655 RALGAPBQ86X10 1494 aa28.19■■■□□ 2.1
MMP28-207ENST00000619655 CARD11Q9BXL7 1154 aa28.18■■■□□ 2.1
MMP28-207ENST00000619655 ATP10AO60312 1499 aa28.18■■■□□ 2.1
MMP28-207ENST00000619655 NEO1Q92859 1461 aa28.18■■■□□ 2.1
MMP28-207ENST00000619655 HECW2Q9P2P5 1572 aa28.17■■■□□ 2.1
MMP28-207ENST00000619655 A2MP01023 1474 aa28.17■■■□□ 2.1
MMP28-207ENST00000619655 MAP3K4Q9Y6R4 1608 aa28.17■■■□□ 2.1
MMP28-207ENST00000619655 CCDC7Q96M83 1385 aa28.16■■■□□ 2.1
MMP28-207ENST00000619655 TET3O43151 1660 aa28.16■■■□□ 2.1
MMP28-207ENST00000619655 PRDM15P57071 1507 aaPredicted RBP28.15■■■□□ 2.1
MMP28-207ENST00000619655 MROH1Q8NDA8 1641 aa28.14■■■□□ 2.1
MMP28-207ENST00000619655 MLH3Q9UHC1 1453 aa28.14■■■□□ 2.1
MMP28-207ENST00000619655 FAM69CQ0P6D2 419 aa28.14■■■□□ 2.09
MMP28-207ENST00000619655 VWDEQ8N2E2 1590 aa28.12■■■□□ 2.09
MMP28-207ENST00000619655 SPHKAPQ2M3C7 1700 aa28.12■■■□□ 2.09
MMP28-207ENST00000619655 ROCK2O75116 1388 aaKnown RBP28.12■■■□□ 2.09
MMP28-207ENST00000619655 KIF7Q2M1P5 1343 aa28.11■■■□□ 2.09
MMP28-207ENST00000619655 PRAG1Q86YV5 1406 aa28.11■■■□□ 2.09
MMP28-207ENST00000619655 ABCA6Q8N139 1617 aa28.1■■■□□ 2.09
MMP28-207ENST00000619655 POLR3GLQ9BT43 218 aa28.09■■■□□ 2.09
MMP28-207ENST00000619655 TRPM2O94759 1503 aa28.09■■■□□ 2.09
MMP28-207ENST00000619655 GGT6Q6P531 493 aa28.08■■■□□ 2.09
MMP28-207ENST00000619655 FRMPD1Q5SYB0 1578 aa28.08■■■□□ 2.09
MMP28-207ENST00000619655 POLR1AO95602 1720 aaPredicted RBP28.08■■■□□ 2.09
MMP28-207ENST00000619655 GLI2P10070 1586 aa28.07■■■□□ 2.08
MMP28-207ENST00000619655 CNTLNQ9NXG0 1405 aa28.07■■■□□ 2.08
MMP28-207ENST00000619655 BCORL1Q5H9F3 1711 aa28.06■■■□□ 2.08
MMP28-207ENST00000619655 DIP2BQ9P265 1576 aa28.06■■■□□ 2.08
MMP28-207ENST00000619655 TRPM1Q7Z4N2 1603 aa28.05■■■□□ 2.08
MMP28-207ENST00000619655 TSPOAP1O95153 1857 aa28.05■■■□□ 2.08
MMP28-207ENST00000619655 PTPRTO14522 1441 aa28.05■■■□□ 2.08
MMP28-207ENST00000619655 CLTCL1P53675 1640 aa28.05■■■□□ 2.08
MMP28-207ENST00000619655 CEP152O94986 1710 aa28.04■■■□□ 2.08
MMP28-207ENST00000619655 RICTORQ6R327 1708 aa28.03■■■□□ 2.08
MMP28-207ENST00000619655 NBPF1Q3BBV0 1214 aa28.03■■■□□ 2.08
MMP28-207ENST00000619655 RNF17Q9BXT8 1623 aaKnown RBP28.02■■■□□ 2.08
MMP28-207ENST00000619655 ST20-MTHFSA0A0A6YYL1 179 aa28.02■■■□□ 2.08
MMP28-207ENST00000619655 PPRC1Q5VV67 1664 aaKnown RBP28.01■■■□□ 2.07
MMP28-207ENST00000619655 EFCAB6Q5THR3 1501 aa28.01■■■□□ 2.07
MMP28-207ENST00000619655 CCER2I3L3R5 266 aa28.01■■■□□ 2.07
MMP28-207ENST00000619655 GTF3C3Q9Y5Q9 886 aa28■■■□□ 2.07
MMP28-207ENST00000619655 UGGT1Q9NYU2 1555 aa27.98■■■□□ 2.07
MMP28-207ENST00000619655 DIP2CQ9Y2E4 1556 aa27.98■■■□□ 2.07
MMP28-207ENST00000619655 YEATS2Q9ULM3 1422 aa27.95■■■□□ 2.07
MMP28-207ENST00000619655 WASHC2CQ9Y4E1 1318 aa27.95■■■□□ 2.06
MMP28-207ENST00000619655 CFAP65Q6ZU64 1925 aaKnown RBP27.94■■■□□ 2.06
MMP28-207ENST00000619655 LMTK2Q8IWU2 1503 aa27.93■■■□□ 2.06
MMP28-207ENST00000619655 GPRASP1Q5JY77 1395 aa27.88■■■□□ 2.05
MMP28-207ENST00000619655 CNGB1Q14028 1251 aaPredicted RBP27.88■■■□□ 2.05
MMP28-207ENST00000619655 NPATQ14207 1427 aa27.87■■■□□ 2.05
MMP28-207ENST00000619655 MADDQ8WXG6 1647 aa27.87■■■□□ 2.05
MMP28-207ENST00000619655 ABCC3O15438 1527 aa27.86■■■□□ 2.05
MMP28-207ENST00000619655 KIF1BO60333 1816 aa27.86■■■□□ 2.05
MMP28-207ENST00000619655 CHGAP10645 457 aaKnown RBP27.85■■■□□ 2.05
MMP28-207ENST00000619655 ARID4BQ4LE39 1312 aaPredicted RBP27.85■■■□□ 2.05
MMP28-207ENST00000619655 PRKRIP1Q9H875 184 aaPredicted RBP27.84■■■□□ 2.05
MMP28-207ENST00000619655 LAMC1P11047 1609 aa27.83■■■□□ 2.05
MMP28-207ENST00000619655 CAMSAP1Q5T5Y3 1602 aa27.81■■■□□ 2.04
MMP28-207ENST00000619655 MROH2AA6NES4 1674 aa27.8■■■□□ 2.04
MMP28-207ENST00000619655 ZMYM4Q5VZL5 1548 aa27.78■■■□□ 2.04
MMP28-207ENST00000619655 KIF13AQ9H1H9 1805 aa27.78■■■□□ 2.04
MMP28-207ENST00000619655 STAC3Q96MF2 364 aa27.76■■■□□ 2.04
MMP28-207ENST00000619655 NEURL4Q96JN8 1562 aa27.75■■■□□ 2.03
MMP28-207ENST00000619655 CCDC184Q52MB2 194 aa27.75■■■□□ 2.03
MMP28-207ENST00000619655 SIGLEC1Q9BZZ2 1709 aa27.74■■■□□ 2.03
MMP28-207ENST00000619655 ADGRF5Q8IZF2 1346 aa27.73■■■□□ 2.03
MMP28-207ENST00000619655 TESK2Q96S53 571 aa27.72■■■□□ 2.03
MMP28-207ENST00000619655 DISP3Q9P2K9 1392 aa27.71■■■□□ 2.03
MMP28-207ENST00000619655 ADGRB3O60242 1522 aa27.71■■■□□ 2.03
MMP28-207ENST00000619655 ZC3H13Q5T200 1668 aaKnown RBP27.7■■■□□ 2.02
MMP28-207ENST00000619655 IFT172Q9UG01 1749 aa27.69■■■□□ 2.02
MMP28-207ENST00000619655 CFAP70Q5T0N1 1121 aa27.69■■■□□ 2.02
MMP28-207ENST00000619655 MYOM2P54296 1465 aa27.68■■■□□ 2.02
MMP28-207ENST00000619655 MRS2Q9HD23 443 aa27.68■■■□□ 2.02
MMP28-207ENST00000619655 IQGAP1P46940 1657 aa27.68■■■□□ 2.02
MMP28-207ENST00000619655 COL17A1Q9UMD9 1497 aaPredicted RBP27.68■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms