RNA–Protein interactions for RNA: ENST00000619119.4

SEMA3B-214, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 3,158 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-214ENST00000619119 UHRF1BP1LA0JNW5 1464 aa21.4■■□□□ 1.02
SEMA3B-214ENST00000619119 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.4■■□□□ 1.022e-7■■□□□ 14.1
SEMA3B-214ENST00000619119 EFCAB2Q5VUJ9 269 aa21.38■■□□□ 1.01
SEMA3B-214ENST00000619119 ZNF326Q5BKZ1 582 aaKnown RBP21.37■■□□□ 1.01
SEMA3B-214ENST00000619119 RSPH4AQ5TD94 716 aa21.37■■□□□ 1.01
SEMA3B-214ENST00000619119 ARHGEF5Q12774 1597 aa21.36■■□□□ 1.01
SEMA3B-214ENST00000619119 C11orf95C9JLR9 678 aaPredicted RBP21.36■■□□□ 1.01
SEMA3B-214ENST00000619119 MYO5CQ9NQX4 1742 aa21.36■■□□□ 1.01
SEMA3B-214ENST00000619119 RPRD2Q5VT52 1461 aaKnown RBP21.36■■□□□ 1.01
SEMA3B-214ENST00000619119 PLCH2O75038 1416 aa21.35■■□□□ 1.01
SEMA3B-214ENST00000619119 KIAA1107Q9UPP5 1409 aa21.34■■□□□ 1.01
SEMA3B-214ENST00000619119 NBPF8Q3BBV2 869 aa21.34■■□□□ 1.01
SEMA3B-214ENST00000619119 ARHGEF12Q9NZN5 1544 aa21.34■■□□□ 1.01
SEMA3B-214ENST00000619119 NPM2Q86SE8 214 aaKnown RBP21.32■■□□□ 1
SEMA3B-214ENST00000619119 AFAP1Q8N556 730 aa21.32■■□□□ 1
SEMA3B-214ENST00000619119 HSPA5P11021 654 aaKnown RBP21.32■■□□□ 1
SEMA3B-214ENST00000619119 WASHC2CQ9Y4E1 1318 aa21.3■■□□□ 1
SEMA3B-214ENST00000619119 NPM1P06748 294 aaKnown RBP eCLIP21.29■■□□□ 1
SEMA3B-214ENST00000619119 WDR7Q9Y4E6 1490 aa21.29■■□□□ 1
SEMA3B-214ENST00000619119 PODXL2Q9NZ53 605 aa21.28■■□□□ 1
SEMA3B-214ENST00000619119 TRAPPC8Q9Y2L5 1435 aa21.28■■□□□ 1
SEMA3B-214ENST00000619119 EIF4G2P78344 907 aaKnown RBP eCLIP21.27■■□□□ 1
SEMA3B-214ENST00000619119 TEX14Q8IWB6 1497 aa21.27■■□□□ 1
SEMA3B-214ENST00000619119 PLEKHH2Q8IVE3 1493 aa21.26■□□□□ 0.99
SEMA3B-214ENST00000619119 ASXL2Q76L83 1435 aa21.25■□□□□ 0.99
SEMA3B-214ENST00000619119 VSIG10Q8N0Z9 540 aa21.25■□□□□ 0.99
SEMA3B-214ENST00000619119 KDM2AQ9Y2K7 1162 aa21.24■□□□□ 0.99
SEMA3B-214ENST00000619119 SPAG9O60271 1321 aaKnown RBP21.23■□□□□ 0.99
SEMA3B-214ENST00000619119 ZMYND15Q9H091 742 aa21.22■□□□□ 0.99
SEMA3B-214ENST00000619119 RSPH6AQ9H0K4 717 aa21.22■□□□□ 0.99
SEMA3B-214ENST00000619119 GLIPR1L2Q4G1C9 344 aa21.21■□□□□ 0.99
SEMA3B-214ENST00000619119 USP35Q9P2H5 1018 aa21.21■□□□□ 0.99
SEMA3B-214ENST00000619119 ABCC1P33527 1531 aa21.2■□□□□ 0.98
SEMA3B-214ENST00000619119 FAM135AQ9P2D6 1515 aa21.19■□□□□ 0.98
SEMA3B-214ENST00000619119 FANCAO15360 1455 aa21.19■□□□□ 0.98
SEMA3B-214ENST00000619119 RGL3Q3MIN7 710 aa21.18■□□□□ 0.98
SEMA3B-214ENST00000619119 DCAF11Q8TEB1 546 aa21.16■□□□□ 0.98
SEMA3B-214ENST00000619119 MAST1Q9Y2H9 1570 aa21.16■□□□□ 0.98
SEMA3B-214ENST00000619119 KDM5DQ9BY66 1539 aa21.15■□□□□ 0.98
SEMA3B-214ENST00000619119 GSE1Q14687 1217 aa21.15■□□□□ 0.98
SEMA3B-214ENST00000619119 SCAPERQ9BY12 1400 aa21.13■□□□□ 0.97
SEMA3B-214ENST00000619119 CYB5RLQ6IPT4 315 aa21.13■□□□□ 0.97
SEMA3B-214ENST00000619119 POLR3GLQ9BT43 218 aa21.13■□□□□ 0.97
SEMA3B-214ENST00000619119 DUOX2Q9NRD8 1548 aa21.12■□□□□ 0.97
SEMA3B-214ENST00000619119 ADGRL1O94910 1474 aa21.12■□□□□ 0.97
SEMA3B-214ENST00000619119 PLXNC1O60486 1568 aa21.11■□□□□ 0.97
SEMA3B-214ENST00000619119 PPM1GO15355 546 aaPredicted RBP21.1■□□□□ 0.97
SEMA3B-214ENST00000619119 CCDC144AA2RUR9 1427 aa21.09■□□□□ 0.97
SEMA3B-214ENST00000619119 ABCA9Q8IUA7 1624 aa21.08■□□□□ 0.97
SEMA3B-214ENST00000619119 FRAT1Q92837 279 aaPredicted RBP21.07■□□□□ 0.96
SEMA3B-214ENST00000619119 ERBINQ96RT1 1412 aa21.07■□□□□ 0.96
SEMA3B-214ENST00000619119 KIF3BO15066 747 aa21.07■□□□□ 0.96
SEMA3B-214ENST00000619119 FAM9BQ8IZU0 186 aa21.07■□□□□ 0.96
SEMA3B-214ENST00000619119 CNGB1Q14028 1251 aaPredicted RBP21.05■□□□□ 0.96
SEMA3B-214ENST00000619119 CARD11Q9BXL7 1154 aa21.05■□□□□ 0.96
SEMA3B-214ENST00000619119 UNC13BO14795 1591 aa21.05■□□□□ 0.96
SEMA3B-214ENST00000619119 ZFYVE16Q7Z3T8 1539 aa21.05■□□□□ 0.96
SEMA3B-214ENST00000619119 ARAP3Q8WWN8 1544 aa21.05■□□□□ 0.96
SEMA3B-214ENST00000619119 CD109Q6YHK3 1445 aa21.04■□□□□ 0.96
SEMA3B-214ENST00000619119 PLA2R1Q13018 1463 aa21.04■□□□□ 0.96
SEMA3B-214ENST00000619119 CCDC184Q52MB2 194 aa21.04■□□□□ 0.96
SEMA3B-214ENST00000619119 USP47Q96K76 1375 aa21.04■□□□□ 0.96
SEMA3B-214ENST00000619119 CCDC7Q96M83 1385 aa21.02■□□□□ 0.96
SEMA3B-214ENST00000619119 KIF7Q2M1P5 1343 aa21.01■□□□□ 0.95
SEMA3B-214ENST00000619119 RTEL1-TNFRSF6BF6WH68 1400 aa21.01■□□□□ 0.95
SEMA3B-214ENST00000619119 FAM43AQ8N2R8 423 aa21.01■□□□□ 0.95
SEMA3B-214ENST00000619119 SPATA31E1Q6ZUB1 1445 aa21■□□□□ 0.95
SEMA3B-214ENST00000619119 ATP7AQ04656 1500 aa21■□□□□ 0.95
SEMA3B-214ENST00000619119 IQGAP3Q86VI3 1631 aa20.99■□□□□ 0.95
SEMA3B-214ENST00000619119 RAPGEF3O95398 923 aa20.96■□□□□ 0.95
SEMA3B-214ENST00000619119 NFKBIBQ15653 356 aa20.95■□□□□ 0.94
SEMA3B-214ENST00000619119 ROCK2O75116 1388 aaKnown RBP20.95■□□□□ 0.94
SEMA3B-214ENST00000619119 NBPF1Q3BBV0 1214 aa20.95■□□□□ 0.94
SEMA3B-214ENST00000619119 MAGI2Q86UL8 1455 aa20.95■□□□□ 0.94
SEMA3B-214ENST00000619119 ST20-MTHFSA0A0A6YYL1 179 aa20.95■□□□□ 0.94
SEMA3B-214ENST00000619119 UHRF1BP1Q6BDS2 1440 aa20.94■□□□□ 0.94
SEMA3B-214ENST00000619119 CNTLNQ9NXG0 1405 aa20.93■□□□□ 0.94
SEMA3B-214ENST00000619119 ZBED9Q6R2W3 1325 aa20.92■□□□□ 0.94
SEMA3B-214ENST00000619119 INO80Q9ULG1 1556 aaPredicted RBP20.92■□□□□ 0.94
SEMA3B-214ENST00000619119 DHX29Q7Z478 1369 aaKnown RBP20.92■□□□□ 0.94
SEMA3B-214ENST00000619119 RALGAPBQ86X10 1494 aa20.92■□□□□ 0.94
SEMA3B-214ENST00000619119 GGT6Q6P531 493 aa20.91■□□□□ 0.94
SEMA3B-214ENST00000619119 KANK1Q14678 1352 aa20.91■□□□□ 0.94
SEMA3B-214ENST00000619119 A2MP01023 1474 aa20.9■□□□□ 0.94
SEMA3B-214ENST00000619119 ZNF518AQ6AHZ1 1483 aa20.9■□□□□ 0.94
SEMA3B-214ENST00000619119 MRS2Q9HD23 443 aa20.9■□□□□ 0.94
SEMA3B-214ENST00000619119 PDE4AP27815 886 aa20.89■□□□□ 0.93
SEMA3B-214ENST00000619119 PRAG1Q86YV5 1406 aa20.88■□□□□ 0.93
SEMA3B-214ENST00000619119 KDM5CP41229 1560 aa20.87■□□□□ 0.93
SEMA3B-214ENST00000619119 SLC4A3P48751 1232 aa20.86■□□□□ 0.93
SEMA3B-214ENST00000619119 HSP90AA2PQ14568 343 aaPredicted RBP20.86■□□□□ 0.93
SEMA3B-214ENST00000619119 BCORL1Q5H9F3 1711 aa20.86■□□□□ 0.93
SEMA3B-214ENST00000619119 SENP3-EIF4A1A0A087X0R7 540 aa20.86■□□□□ 0.93
SEMA3B-214ENST00000619119 E9PCH4 1651 aa20.86■□□□□ 0.93
SEMA3B-214ENST00000619119 KIDINS220Q9ULH0 1771 aa20.86■□□□□ 0.93
SEMA3B-214ENST00000619119 POGZQ7Z3K3 1410 aa20.85■□□□□ 0.93
SEMA3B-214ENST00000619119 A0A0U1RQG5 324 aaPredicted RBP20.85■□□□□ 0.93
SEMA3B-214ENST00000619119 ATP10AO60312 1499 aa20.84■□□□□ 0.93
SEMA3B-214ENST00000619119 PRKRIP1Q9H875 184 aaPredicted RBP20.84■□□□□ 0.93
SEMA3B-214ENST00000619119 FAM69CQ0P6D2 419 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 293.9 ms